Experiment: Lomefloxacin 0.0004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_885 and PfGW456L13_886 are separated by 314 nucleotides PfGW456L13_886 and PfGW456L13_887 overlap by 25 nucleotides
PfGW456L13_885 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 994,328 to 995,266
_885
PfGW456L13_886 - ChaC-related protein, at 995,581 to 996,249
_886
PfGW456L13_887 - Glycerol-3-phosphate transporter, at 996,225 to 997,574
_887
Position (kb) 995
996
997 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 994.677 kb on - strand, within PfGW456L13_885 at 994.677 kb on - strand, within PfGW456L13_885 at 994.764 kb on + strand, within PfGW456L13_885 at 994.764 kb on + strand, within PfGW456L13_885 at 994.764 kb on + strand, within PfGW456L13_885 at 994.765 kb on - strand, within PfGW456L13_885 at 994.872 kb on - strand, within PfGW456L13_885 at 994.921 kb on + strand, within PfGW456L13_885 at 994.921 kb on + strand, within PfGW456L13_885 at 994.922 kb on - strand, within PfGW456L13_885 at 994.922 kb on - strand, within PfGW456L13_885 at 994.973 kb on + strand, within PfGW456L13_885 at 995.004 kb on - strand, within PfGW456L13_885 at 995.153 kb on + strand, within PfGW456L13_885 at 995.154 kb on - strand, within PfGW456L13_885 at 995.154 kb on - strand, within PfGW456L13_885 at 995.180 kb on + strand at 995.241 kb on + strand at 995.241 kb on + strand at 995.241 kb on + strand at 995.242 kb on - strand at 995.340 kb on + strand at 995.375 kb on + strand at 995.375 kb on + strand at 995.376 kb on - strand at 995.390 kb on + strand at 995.390 kb on + strand at 995.390 kb on + strand at 995.390 kb on + strand at 995.390 kb on + strand at 995.390 kb on + strand at 995.391 kb on - strand at 995.391 kb on - strand at 995.391 kb on - strand at 995.392 kb on + strand at 995.392 kb on + strand at 995.392 kb on + strand at 995.392 kb on + strand at 995.392 kb on + strand at 995.392 kb on + strand at 995.393 kb on - strand at 995.393 kb on - strand at 995.393 kb on - strand at 995.393 kb on - strand at 995.393 kb on - strand at 995.393 kb on - strand at 995.393 kb on - strand at 995.405 kb on - strand at 995.449 kb on - strand at 995.469 kb on + strand at 995.491 kb on - strand at 995.500 kb on + strand at 995.507 kb on + strand at 995.507 kb on + strand at 995.507 kb on + strand at 995.507 kb on + strand at 995.508 kb on - strand at 995.508 kb on - strand at 995.508 kb on - strand at 995.508 kb on - strand at 995.516 kb on + strand at 995.522 kb on + strand at 995.537 kb on + strand at 995.537 kb on + strand at 995.537 kb on + strand at 995.537 kb on + strand at 995.537 kb on + strand at 995.537 kb on + strand at 995.537 kb on + strand at 995.537 kb on + strand at 995.538 kb on - strand at 995.538 kb on - strand at 995.538 kb on - strand at 995.538 kb on - strand at 995.540 kb on + strand at 995.540 kb on + strand at 995.540 kb on + strand at 995.540 kb on + strand at 995.541 kb on - strand at 995.541 kb on - strand at 995.544 kb on + strand at 995.544 kb on + strand at 995.544 kb on + strand at 995.544 kb on + strand at 995.544 kb on + strand at 995.545 kb on - strand at 995.545 kb on - strand at 995.545 kb on - strand at 995.573 kb on + strand at 995.617 kb on + strand at 995.806 kb on + strand, within PfGW456L13_886 at 995.806 kb on + strand, within PfGW456L13_886 at 995.806 kb on + strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.807 kb on - strand, within PfGW456L13_886 at 995.896 kb on + strand, within PfGW456L13_886 at 995.932 kb on + strand, within PfGW456L13_886 at 995.933 kb on - strand, within PfGW456L13_886 at 995.933 kb on - strand, within PfGW456L13_886 at 996.055 kb on + strand, within PfGW456L13_886 at 996.056 kb on - strand, within PfGW456L13_886 at 996.056 kb on - strand, within PfGW456L13_886 at 996.056 kb on - strand, within PfGW456L13_886 at 996.056 kb on - strand, within PfGW456L13_886 at 996.056 kb on - strand, within PfGW456L13_886 at 996.056 kb on - strand, within PfGW456L13_886 at 996.056 kb on - strand, within PfGW456L13_886 at 996.120 kb on + strand, within PfGW456L13_886 at 996.133 kb on + strand, within PfGW456L13_886 at 996.133 kb on + strand, within PfGW456L13_886 at 996.134 kb on - strand, within PfGW456L13_886 at 996.358 kb on + strand at 996.397 kb on + strand, within PfGW456L13_887 at 996.397 kb on + strand, within PfGW456L13_887 at 996.398 kb on - strand, within PfGW456L13_887 at 996.490 kb on + strand, within PfGW456L13_887 at 996.491 kb on - strand, within PfGW456L13_887 at 996.491 kb on - strand, within PfGW456L13_887 at 996.491 kb on - strand, within PfGW456L13_887 at 996.491 kb on - strand, within PfGW456L13_887 at 996.491 kb on - strand, within PfGW456L13_887 at 996.559 kb on + strand, within PfGW456L13_887 at 996.560 kb on - strand, within PfGW456L13_887 at 996.668 kb on + strand, within PfGW456L13_887 at 996.682 kb on + strand, within PfGW456L13_887 at 996.682 kb on + strand, within PfGW456L13_887 at 996.683 kb on - strand, within PfGW456L13_887 at 996.683 kb on - strand, within PfGW456L13_887 at 996.683 kb on - strand, within PfGW456L13_887 at 996.683 kb on - strand, within PfGW456L13_887 at 996.691 kb on + strand, within PfGW456L13_887 at 996.691 kb on + strand, within PfGW456L13_887 at 996.691 kb on + strand, within PfGW456L13_887 at 996.691 kb on + strand, within PfGW456L13_887 at 996.691 kb on + strand, within PfGW456L13_887 at 996.692 kb on - strand, within PfGW456L13_887 at 996.739 kb on + strand, within PfGW456L13_887 at 996.739 kb on + strand, within PfGW456L13_887 at 996.739 kb on + strand, within PfGW456L13_887 at 996.740 kb on - strand, within PfGW456L13_887 at 996.766 kb on + strand, within PfGW456L13_887 at 996.778 kb on + strand, within PfGW456L13_887 at 996.805 kb on + strand, within PfGW456L13_887 at 996.805 kb on + strand, within PfGW456L13_887 at 996.805 kb on + strand, within PfGW456L13_887 at 996.805 kb on + strand, within PfGW456L13_887 at 996.806 kb on - strand, within PfGW456L13_887 at 996.806 kb on - strand, within PfGW456L13_887 at 996.832 kb on + strand, within PfGW456L13_887 at 996.832 kb on + strand, within PfGW456L13_887 at 996.832 kb on + strand, within PfGW456L13_887 at 996.833 kb on - strand, within PfGW456L13_887 at 996.833 kb on - strand, within PfGW456L13_887 at 996.883 kb on + strand, within PfGW456L13_887 at 996.907 kb on + strand, within PfGW456L13_887 at 996.907 kb on + strand, within PfGW456L13_887 at 996.907 kb on + strand, within PfGW456L13_887 at 996.907 kb on + strand, within PfGW456L13_887 at 997.003 kb on + strand, within PfGW456L13_887 at 997.003 kb on + strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887 at 997.004 kb on - strand, within PfGW456L13_887
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.0004 mM remove 994,677 - PfGW456L13_885 0.37 +1.4 994,677 - PfGW456L13_885 0.37 -1.1 994,764 + PfGW456L13_885 0.46 +0.3 994,764 + PfGW456L13_885 0.46 -2.6 994,764 + PfGW456L13_885 0.46 +1.0 994,765 - PfGW456L13_885 0.47 -1.1 994,872 - PfGW456L13_885 0.58 -0.6 994,921 + PfGW456L13_885 0.63 -0.6 994,921 + PfGW456L13_885 0.63 -0.0 994,922 - PfGW456L13_885 0.63 +0.2 994,922 - PfGW456L13_885 0.63 -1.4 994,973 + PfGW456L13_885 0.69 +0.6 995,004 - PfGW456L13_885 0.72 -1.6 995,153 + PfGW456L13_885 0.88 -1.8 995,154 - PfGW456L13_885 0.88 +0.0 995,154 - PfGW456L13_885 0.88 -0.3 995,180 + -1.0 995,241 + +0.8 995,241 + +0.3 995,241 + -0.2 995,242 - -0.3 995,340 + +0.9 995,375 + +1.3 995,375 + -0.8 995,376 - +0.1 995,390 + +0.8 995,390 + -0.7 995,390 + +0.8 995,390 + +0.8 995,390 + +0.3 995,390 + +0.1 995,391 - -1.8 995,391 - +1.0 995,391 - -0.3 995,392 + +1.1 995,392 + -0.8 995,392 + +1.7 995,392 + +0.0 995,392 + -0.3 995,392 + -0.7 995,393 - -0.7 995,393 - -0.1 995,393 - +0.5 995,393 - -0.3 995,393 - -1.9 995,393 - +0.2 995,393 - -0.7 995,405 - -1.8 995,449 - +0.8 995,469 + +0.5 995,491 - -1.1 995,500 + +0.5 995,507 + -0.3 995,507 + -1.6 995,507 + +0.1 995,507 + +1.1 995,508 - +0.3 995,508 - -0.7 995,508 - -0.5 995,508 - +1.2 995,516 + -1.1 995,522 + -0.9 995,537 + +0.4 995,537 + +0.5 995,537 + -1.2 995,537 + -0.2 995,537 + +0.4 995,537 + +0.4 995,537 + +1.6 995,537 + -0.9 995,538 - -1.1 995,538 - -0.8 995,538 - -2.7 995,538 - -0.6 995,540 + -1.1 995,540 + -3.6 995,540 + -0.5 995,540 + -2.1 995,541 - +0.9 995,541 - +0.1 995,544 + -2.0 995,544 + -0.8 995,544 + -0.2 995,544 + +0.4 995,544 + -1.6 995,545 - -0.9 995,545 - +2.9 995,545 - +0.7 995,573 + +1.1 995,617 + -0.8 995,806 + PfGW456L13_886 0.34 -2.1 995,806 + PfGW456L13_886 0.34 -0.4 995,806 + PfGW456L13_886 0.34 -0.2 995,807 - PfGW456L13_886 0.34 -0.6 995,807 - PfGW456L13_886 0.34 -0.8 995,807 - PfGW456L13_886 0.34 +1.4 995,807 - PfGW456L13_886 0.34 -0.8 995,807 - PfGW456L13_886 0.34 -1.1 995,807 - PfGW456L13_886 0.34 -0.3 995,807 - PfGW456L13_886 0.34 -0.8 995,807 - PfGW456L13_886 0.34 +1.0 995,896 + PfGW456L13_886 0.47 -1.3 995,932 + PfGW456L13_886 0.52 -1.8 995,933 - PfGW456L13_886 0.53 +0.6 995,933 - PfGW456L13_886 0.53 +0.8 996,055 + PfGW456L13_886 0.71 +0.1 996,056 - PfGW456L13_886 0.71 -1.4 996,056 - PfGW456L13_886 0.71 -1.4 996,056 - PfGW456L13_886 0.71 +0.2 996,056 - PfGW456L13_886 0.71 -1.1 996,056 - PfGW456L13_886 0.71 +3.1 996,056 - PfGW456L13_886 0.71 -0.1 996,056 - PfGW456L13_886 0.71 -0.6 996,120 + PfGW456L13_886 0.81 +0.3 996,133 + PfGW456L13_886 0.83 +0.2 996,133 + PfGW456L13_886 0.83 -0.8 996,134 - PfGW456L13_886 0.83 -0.3 996,358 + +1.1 996,397 + PfGW456L13_887 0.13 +0.2 996,397 + PfGW456L13_887 0.13 +0.5 996,398 - PfGW456L13_887 0.13 +1.1 996,490 + PfGW456L13_887 0.20 +0.9 996,491 - PfGW456L13_887 0.20 +1.0 996,491 - PfGW456L13_887 0.20 +1.5 996,491 - PfGW456L13_887 0.20 +0.5 996,491 - PfGW456L13_887 0.20 +0.9 996,491 - PfGW456L13_887 0.20 +0.4 996,559 + PfGW456L13_887 0.25 +0.7 996,560 - PfGW456L13_887 0.25 +1.0 996,668 + PfGW456L13_887 0.33 -0.1 996,682 + PfGW456L13_887 0.34 -1.0 996,682 + PfGW456L13_887 0.34 +1.1 996,683 - PfGW456L13_887 0.34 +1.3 996,683 - PfGW456L13_887 0.34 +1.1 996,683 - PfGW456L13_887 0.34 +1.5 996,683 - PfGW456L13_887 0.34 +1.5 996,691 + PfGW456L13_887 0.35 +0.9 996,691 + PfGW456L13_887 0.35 +0.1 996,691 + PfGW456L13_887 0.35 +0.4 996,691 + PfGW456L13_887 0.35 +2.2 996,691 + PfGW456L13_887 0.35 -0.3 996,692 - PfGW456L13_887 0.35 +1.2 996,739 + PfGW456L13_887 0.38 +0.4 996,739 + PfGW456L13_887 0.38 -0.6 996,739 + PfGW456L13_887 0.38 +0.3 996,740 - PfGW456L13_887 0.38 +0.9 996,766 + PfGW456L13_887 0.40 -0.5 996,778 + PfGW456L13_887 0.41 +1.8 996,805 + PfGW456L13_887 0.43 +1.5 996,805 + PfGW456L13_887 0.43 +1.1 996,805 + PfGW456L13_887 0.43 +1.2 996,805 + PfGW456L13_887 0.43 +0.0 996,806 - PfGW456L13_887 0.43 +0.7 996,806 - PfGW456L13_887 0.43 +0.3 996,832 + PfGW456L13_887 0.45 +0.3 996,832 + PfGW456L13_887 0.45 -0.3 996,832 + PfGW456L13_887 0.45 +0.6 996,833 - PfGW456L13_887 0.45 -1.3 996,833 - PfGW456L13_887 0.45 +1.5 996,883 + PfGW456L13_887 0.49 -0.3 996,907 + PfGW456L13_887 0.51 +1.9 996,907 + PfGW456L13_887 0.51 +2.0 996,907 + PfGW456L13_887 0.51 +1.6 996,907 + PfGW456L13_887 0.51 +0.1 997,003 + PfGW456L13_887 0.58 +1.3 997,003 + PfGW456L13_887 0.58 +1.1 997,004 - PfGW456L13_887 0.58 +0.0 997,004 - PfGW456L13_887 0.58 +2.4 997,004 - PfGW456L13_887 0.58 +0.0 997,004 - PfGW456L13_887 0.58 -0.2 997,004 - PfGW456L13_887 0.58 +0.5 997,004 - PfGW456L13_887 0.58 +1.5 997,004 - PfGW456L13_887 0.58 +0.3 997,004 - PfGW456L13_887 0.58 +1.9
Or see this region's nucleotide sequence