Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4456

Experiment: Lomefloxacin 0.0004 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.0004 mM
4,979,692	+		PfGW456L13_4455	0.34	-1.5
4,979,692	+		PfGW456L13_4455	0.34	+1.0
4,979,692	+		PfGW456L13_4455	0.34	-0.0
4,979,692	+		PfGW456L13_4455	0.34	+1.4
4,979,693	-		PfGW456L13_4455	0.34	+0.6
4,979,693	-		PfGW456L13_4455	0.34	+1.0
4,979,693	-		PfGW456L13_4455	0.34	-1.5
4,979,693	-		PfGW456L13_4455	0.34	+0.4
4,979,730	-		PfGW456L13_4455	0.39	+0.7
4,979,730	-		PfGW456L13_4455	0.39	+0.0
4,979,792	+		PfGW456L13_4455	0.46	+1.3
4,979,792	+		PfGW456L13_4455	0.46	-1.2
4,979,792	+		PfGW456L13_4455	0.46	+1.6
4,979,792	+		PfGW456L13_4455	0.46	-1.3
4,979,793	-		PfGW456L13_4455	0.46	-2.3
4,979,793	-		PfGW456L13_4455	0.46	-1.8
4,979,813	+		PfGW456L13_4455	0.48	+0.0
4,979,813	+		PfGW456L13_4455	0.48	+0.5
4,979,813	+		PfGW456L13_4455	0.48	-0.4
4,979,814	-		PfGW456L13_4455	0.48	-1.0
4,980,019	+		PfGW456L13_4455	0.72	+0.5
4,980,019	+		PfGW456L13_4455	0.72	+0.3
4,980,036	-		PfGW456L13_4455	0.74	-2.1
4,980,036	-		PfGW456L13_4455	0.74	+0.5
4,980,047	+		PfGW456L13_4455	0.75	+1.2
4,980,047	+		PfGW456L13_4455	0.75	-2.4
4,980,047	+		PfGW456L13_4455	0.75	-1.5
4,980,047	+		PfGW456L13_4455	0.75	+1.9
4,980,047	+		PfGW456L13_4455	0.75	+0.8
4,980,047	+		PfGW456L13_4455	0.75	+0.4
4,980,047	+		PfGW456L13_4455	0.75	-1.5
4,980,047	+		PfGW456L13_4455	0.75	+0.8
4,980,048	-		PfGW456L13_4455	0.75	-0.8
4,980,048	-		PfGW456L13_4455	0.75	-2.1
4,980,048	-		PfGW456L13_4455	0.75	-2.5
4,980,048	-		PfGW456L13_4455	0.75	+1.5
4,980,080	-		PfGW456L13_4455	0.79	-2.5
4,980,080	-		PfGW456L13_4455	0.79	+0.0
4,980,080	-		PfGW456L13_4455	0.79	+0.8
4,980,080	-		PfGW456L13_4455	0.79	-1.2
4,980,080	-		PfGW456L13_4455	0.79	+0.5
4,980,152	-		PfGW456L13_4455	0.87	-0.9
4,980,176	+				-2.0
4,980,177	-				+1.2
4,980,200	+				+1.2
4,980,200	+				-1.0
4,980,201	-				+0.7
4,980,250	+				+0.9
4,980,250	+				+0.1
4,980,250	+				-0.4
4,980,251	-				-0.8
4,980,254	+				-0.7
4,980,255	-				-1.3
4,980,255	-				-1.2
4,980,255	-				-1.8
4,980,325	+				-0.2
4,980,325	+				-0.8
4,980,325	+				-1.2
4,980,448	+				+0.5
4,980,544	-				-2.5
4,980,572	+				+1.8
4,980,572	+				-1.4
4,980,573	-				-1.0
4,980,573	-				-1.2
4,980,573	-				+1.3
4,980,588	+				+0.1
4,980,589	-				-0.0
4,980,739	+		PfGW456L13_4456	0.22	+0.0
4,980,739	+		PfGW456L13_4456	0.22	-0.4
4,980,740	-		PfGW456L13_4456	0.22	+0.6
4,980,772	+		PfGW456L13_4456	0.28	-1.1
4,980,772	+		PfGW456L13_4456	0.28	-2.7
4,980,772	+		PfGW456L13_4456	0.28	+0.1
4,980,772	+		PfGW456L13_4456	0.28	+0.4
4,980,772	+		PfGW456L13_4456	0.28	-0.7
4,980,772	+		PfGW456L13_4456	0.28	+1.4
4,980,772	+		PfGW456L13_4456	0.28	+1.9
4,980,772	+		PfGW456L13_4456	0.28	+0.1
4,980,772	+		PfGW456L13_4456	0.28	+0.1
4,980,772	+		PfGW456L13_4456	0.28	+1.0
4,980,773	-		PfGW456L13_4456	0.28	-1.5
4,980,773	-		PfGW456L13_4456	0.28	-1.1
4,980,799	+		PfGW456L13_4456	0.32	+0.6
4,980,799	+		PfGW456L13_4456	0.32	+0.7
4,980,799	+		PfGW456L13_4456	0.32	-1.1
4,980,799	+		PfGW456L13_4456	0.32	-2.1
4,980,799	+		PfGW456L13_4456	0.32	+0.4
4,980,799	+		PfGW456L13_4456	0.32	+1.0
4,980,799	+		PfGW456L13_4456	0.32	-0.9
4,980,800	-		PfGW456L13_4456	0.32	+0.0
4,980,800	-		PfGW456L13_4456	0.32	-0.8
4,980,800	-		PfGW456L13_4456	0.32	-0.4
4,980,800	-		PfGW456L13_4456	0.32	-1.8
4,980,800	-		PfGW456L13_4456	0.32	-2.5
4,980,800	-				+3.2
4,980,800	-		PfGW456L13_4456	0.32	-1.5
4,980,870	+		PfGW456L13_4456	0.44	+3.8
4,980,870	+		PfGW456L13_4456	0.44	-0.2
4,980,870	+		PfGW456L13_4456	0.44	-1.5
4,980,870	+		PfGW456L13_4456	0.44	+1.0
4,980,870	+		PfGW456L13_4456	0.44	+2.0
4,980,870	+		PfGW456L13_4456	0.44	+3.0
4,980,870	+		PfGW456L13_4456	0.44	-0.6
4,980,870	+		PfGW456L13_4456	0.44	+3.0
4,980,870	+		PfGW456L13_4456	0.44	+0.8
4,980,870	+		PfGW456L13_4456	0.44	+1.0
4,980,870	+		PfGW456L13_4456	0.44	+1.3
4,980,870	+		PfGW456L13_4456	0.44	+0.3
4,980,870	+		PfGW456L13_4456	0.44	+1.2
4,980,870	+		PfGW456L13_4456	0.44	-1.1
4,980,871	-		PfGW456L13_4456	0.44	-0.1
4,980,871	-		PfGW456L13_4456	0.44	-1.5
4,980,871	-		PfGW456L13_4456	0.44	-0.9
4,980,871	-		PfGW456L13_4456	0.44	-0.1
4,980,871	-		PfGW456L13_4456	0.44	-1.2
4,980,871	-		PfGW456L13_4456	0.44	+0.7
4,980,871	-		PfGW456L13_4456	0.44	+0.3
4,980,871	-		PfGW456L13_4456	0.44	+0.1
4,980,871	-		PfGW456L13_4456	0.44	+1.6
4,980,916	+		PfGW456L13_4456	0.52	-0.6
4,980,916	+		PfGW456L13_4456	0.52	-0.7
4,980,916	+		PfGW456L13_4456	0.52	-1.2
4,980,917	-		PfGW456L13_4456	0.52	-0.8
4,980,917	-		PfGW456L13_4456	0.52	+0.3
4,980,917	-		PfGW456L13_4456	0.52	-0.0
4,980,917	-		PfGW456L13_4456	0.52	-0.4
4,981,212	+				-0.2
4,981,212	+				+1.0
4,981,212	+				+2.4
4,981,212	+				+2.1
4,981,212	+				+1.1
4,981,212	+				+1.0
4,981,212	+				+0.0
4,981,212	+				-0.8
4,981,212	+				+1.3
4,981,212	+				+1.6
4,981,213	-				-0.3
4,981,213	-				-0.6
4,981,213	-				-1.0
4,981,213	-				-1.7
4,981,213	-				-0.2
4,981,213	-				+1.0
4,981,213	-				-1.5
4,981,234	+				-1.4
4,981,234	+				+0.6
4,981,234	+				+0.7
4,981,234	+				+0.1
4,981,234	+				+0.3
4,981,234	+				-0.7
4,981,235	-				-0.2
4,981,235	-				-0.2
4,981,235	-				+0.3
4,981,235	-				+3.5
4,981,235	-				-1.7
4,981,235	-				-0.7
4,981,235	-				-1.3
4,981,255	-				-1.5
4,981,286	+				+0.7
4,981,286	+				-0.3
4,981,286	+				+1.6
4,981,307	-				-1.5
4,981,307	-				+1.6
4,981,318	+				+1.5
4,981,318	+				+2.8
4,981,335	-				-2.2
4,981,335	-				-2.1
4,981,344	-				+1.0
4,981,344	-				-1.0
4,981,528	+		PfGW456L13_4457	0.28	+2.1
4,981,604	+		PfGW456L13_4457	0.52	+1.3
4,981,604	+		PfGW456L13_4457	0.52	+1.0
4,981,604	+		PfGW456L13_4457	0.52	-0.7
4,981,605	-		PfGW456L13_4457	0.52	+0.6
4,981,605	-		PfGW456L13_4457	0.52	-0.9
4,981,646	+		PfGW456L13_4457	0.65	+0.7
4,981,646	+		PfGW456L13_4457	0.65	+1.7
4,981,646	+		PfGW456L13_4457	0.65	+1.6
4,981,646	+		PfGW456L13_4457	0.65	-0.5
4,981,646	+		PfGW456L13_4457	0.65	+0.1
4,981,647	-		PfGW456L13_4457	0.65	+1.6
4,981,771	+				-0.8
4,981,771	+				-1.5
4,981,772	-				-1.5
4,981,772	-				-2.4
4,981,772	-				-1.5
4,981,785	+				-0.2
4,981,919	+		PfGW456L13_4458	0.12	-1.4
4,981,919	+		PfGW456L13_4458	0.12	+0.8
4,981,919	+		PfGW456L13_4458	0.12	+0.6
4,981,919	+		PfGW456L13_4458	0.12	-0.3
4,981,920	-		PfGW456L13_4458	0.12	-0.7