Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_43

Experiment: Lomefloxacin 0.0004 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.0004 mM
48,487	-		PfGW456L13_42	0.56	-2.2
48,568	+		PfGW456L13_42	0.62	-1.3
48,569	-		PfGW456L13_42	0.62	-1.5
48,652	+		PfGW456L13_42	0.68	-1.1
48,663	+		PfGW456L13_42	0.69	-0.4
48,663	+		PfGW456L13_42	0.69	-0.7
48,663	+		PfGW456L13_42	0.69	-4.3
48,663	+		PfGW456L13_42	0.69	+0.1
48,663	+		PfGW456L13_42	0.69	+0.3
48,664	-		PfGW456L13_42	0.69	-0.7
48,664	-		PfGW456L13_42	0.69	-0.1
48,664	-		PfGW456L13_42	0.69	+0.3
48,865	+		PfGW456L13_42	0.84	-2.0
48,865	+		PfGW456L13_42	0.84	-3.2
48,865	+		PfGW456L13_42	0.84	+0.7
48,865	+		PfGW456L13_42	0.84	-1.8
48,865	+		PfGW456L13_42	0.84	-1.0
48,866	-		PfGW456L13_42	0.84	-1.5
48,866	-		PfGW456L13_42	0.84	+0.4
48,866	-		PfGW456L13_42	0.84	+0.6
48,866	-		PfGW456L13_42	0.84	-0.4
48,905	-		PfGW456L13_42	0.87	+1.0
49,008	+				-0.4
49,009	-				+0.7
49,009	-				+0.9
49,029	+				-0.9
49,029	+				-1.6
49,029	+				-0.1
49,029	+				+0.1
49,029	+				+0.4
49,029	+				-0.3
49,030	-				+0.1
49,030	-				-2.5
49,030	-				-0.4
49,030	-				+1.2
49,030	-				-0.8
49,030	-				-0.7
49,030	-				-1.6
49,030	-				+0.3
49,030	-				-0.2
49,030	-				-1.2
49,030	-				-1.0
49,030	-				-0.6
49,082	+				-2.0
49,128	-				+1.6
49,128	-				-1.5
49,141	-				+1.4
49,147	+				-0.7
49,148	-				+0.7
49,148	-				-1.4
49,154	+				-0.7
49,154	+				+1.4
49,154	+				-0.3
49,154	+				-0.8
49,154	+				+0.2
49,155	-				-0.5
49,155	-				-1.3
49,155	-				+0.3
49,159	+				+0.7
49,299	+				-1.1
49,299	+				+2.0
49,300	-				+0.4
49,300	-				-2.6
49,300	-				-1.0
49,300	-				+1.0
49,300	-				-0.8
49,300	-				-1.3
49,316	+				-0.7
49,316	+				+0.2
49,316	+				-1.1
49,316	+				-0.7
49,317	-				-0.8
49,317	-				-0.6
49,317	-				-1.6
49,317	-				+1.1
49,317	-				-0.0
49,442	+				+0.3
49,443	-				-0.7
49,490	+				-0.3
49,491	-				+0.4
49,514	+		PfGW456L13_43	0.11	-0.2
49,515	-		PfGW456L13_43	0.11	-1.0
49,515	-		PfGW456L13_43	0.11	+1.9
49,515	-		PfGW456L13_43	0.11	-0.7
49,515	-		PfGW456L13_43	0.11	+1.7
49,575	-		PfGW456L13_43	0.14	+1.1
49,604	+		PfGW456L13_43	0.16	+0.1
49,604	+		PfGW456L13_43	0.16	-0.1
49,604	+		PfGW456L13_43	0.16	+1.0
49,604	+		PfGW456L13_43	0.16	+0.3
49,604	+		PfGW456L13_43	0.16	-0.3
49,604	+		PfGW456L13_43	0.16	-0.1
49,605	-		PfGW456L13_43	0.16	-0.4
49,605	-		PfGW456L13_43	0.16	-1.0
49,605	-		PfGW456L13_43	0.16	+0.1
49,605	-		PfGW456L13_43	0.16	-0.4
49,605	-		PfGW456L13_43	0.16	-1.0
49,605	-		PfGW456L13_43	0.16	-0.8
49,667	+		PfGW456L13_43	0.19	+1.1
49,667	+		PfGW456L13_43	0.19	+0.1
49,668	-		PfGW456L13_43	0.19	-1.1
49,668	-		PfGW456L13_43	0.19	+0.7
49,668	-		PfGW456L13_43	0.19	-0.1
49,668	-		PfGW456L13_43	0.19	-1.4
49,668	-		PfGW456L13_43	0.19	+0.2
49,823	+		PfGW456L13_43	0.27	+1.8
49,823	+		PfGW456L13_43	0.27	-0.4
49,823	+		PfGW456L13_43	0.27	-1.1
49,823	+		PfGW456L13_43	0.27	-0.7
49,823	+		PfGW456L13_43	0.27	+0.7
49,823	+		PfGW456L13_43	0.27	-1.1
49,823	+		PfGW456L13_43	0.27	-1.3
49,823	+		PfGW456L13_43	0.27	-1.5
49,824	-		PfGW456L13_43	0.27	-2.4
49,824	-		PfGW456L13_43	0.27	+1.2
49,824	-		PfGW456L13_43	0.27	+0.0
49,824	-		PfGW456L13_43	0.27	-0.8
49,824	-		PfGW456L13_43	0.27	+0.7
49,824	-		PfGW456L13_43	0.27	+0.1
49,824	-		PfGW456L13_43	0.27	-0.4
49,824	-		PfGW456L13_43	0.27	+0.2
49,824	-		PfGW456L13_43	0.27	-0.2
49,824	-		PfGW456L13_43	0.27	+1.3
49,824	-		PfGW456L13_43	0.27	-0.2
49,824	-		PfGW456L13_43	0.27	+0.8
49,824	-		PfGW456L13_43	0.27	-0.2
49,824	-		PfGW456L13_43	0.27	-1.1
49,824	-		PfGW456L13_43	0.27	+0.5
49,824	-		PfGW456L13_43	0.27	+0.4
49,824	-		PfGW456L13_43	0.27	-1.3
49,824	-		PfGW456L13_43	0.27	+0.2
49,824	-		PfGW456L13_43	0.27	+0.3
49,824	-		PfGW456L13_43	0.27	+0.3
49,824	-		PfGW456L13_43	0.27	+0.3
49,824	-		PfGW456L13_43	0.27	-0.8
49,824	-		PfGW456L13_43	0.27	+0.0
49,922	+		PfGW456L13_43	0.32	-0.8
49,922	+		PfGW456L13_43	0.32	+0.6
49,922	+		PfGW456L13_43	0.32	-0.1
49,923	-		PfGW456L13_43	0.32	+0.2
49,973	+		PfGW456L13_43	0.35	-0.2
49,997	+		PfGW456L13_43	0.36	-1.9
49,997	+		PfGW456L13_43	0.36	+0.7
49,997	+		PfGW456L13_43	0.36	-0.2
49,997	+		PfGW456L13_43	0.36	+1.6
49,998	-		PfGW456L13_43	0.36	+1.0
49,998	-		PfGW456L13_43	0.36	-1.3
49,998	-		PfGW456L13_43	0.36	-1.5
49,998	-		PfGW456L13_43	0.36	+0.3
49,998	-		PfGW456L13_43	0.36	+0.6
49,998	-		PfGW456L13_43	0.36	+0.8
49,998	-		PfGW456L13_43	0.36	-0.1
49,998	-		PfGW456L13_43	0.36	-0.1
49,998	-		PfGW456L13_43	0.36	+0.4
49,998	-		PfGW456L13_43	0.36	+1.7
49,998	-		PfGW456L13_43	0.36	+0.2
49,998	-		PfGW456L13_43	0.36	-1.2
49,998	-		PfGW456L13_43	0.36	+0.4
49,998	-		PfGW456L13_43	0.36	+0.5
50,015	+		PfGW456L13_43	0.37	-1.3
50,265	-		PfGW456L13_43	0.50	+1.0
50,265	-		PfGW456L13_43	0.50	+0.1
50,279	+		PfGW456L13_43	0.51	-1.6
50,279	+		PfGW456L13_43	0.51	-0.9
50,279	+		PfGW456L13_43	0.51	-0.8
50,280	-		PfGW456L13_43	0.51	-0.8
50,280	-		PfGW456L13_43	0.51	+0.3
50,298	+		PfGW456L13_43	0.52	-1.9
50,298	+		PfGW456L13_43	0.52	-0.0
50,387	+		PfGW456L13_43	0.57	-1.5
50,388	-		PfGW456L13_43	0.57	+1.1
50,388	-		PfGW456L13_43	0.57	+0.1
50,390	+		PfGW456L13_43	0.57	+1.0
50,390	+		PfGW456L13_43	0.57	+0.8
50,391	-		PfGW456L13_43	0.57	-0.5
50,391	-		PfGW456L13_43	0.57	+0.3
50,897	+		PfGW456L13_43	0.83	-2.3
50,909	+		PfGW456L13_43	0.84	-0.6
50,909	+		PfGW456L13_43	0.84	+0.4
50,909	+		PfGW456L13_43	0.84	-0.1
50,909	+		PfGW456L13_43	0.84	+0.4
50,909	+		PfGW456L13_43	0.84	+0.4
50,909	+		PfGW456L13_43	0.84	-0.2
50,910	-		PfGW456L13_43	0.84	-0.9
50,910	-		PfGW456L13_43	0.84	+0.3
51,051	-				-1.4
51,051	-				-0.4
51,122	+				-1.3
51,122	+				-1.1
51,123	-				-1.6
51,208	+				+0.1
51,208	+				-0.8
51,209	-				-0.8
51,209	-				+0.1
51,209	-				+0.1
51,227	+				-0.7
51,227	+				+0.2
51,229	+				+1.0
51,230	-				-0.7
51,240	+				-1.4
51,240	+				+0.1
51,240	+				+0.6
51,240	+				-0.3
51,241	-				+0.4
51,241	-				-1.1
51,273	+				-1.0
51,273	+				-0.1
51,273	+				-1.7
51,274	-				+0.5
51,308	+				-1.3
51,308	+				-0.8
51,308	+				-1.6
51,308	+				-0.1
51,309	-				-0.4
51,309	-				+1.5
51,309	-				+1.0
51,309	-				-0.9
51,309	-				-1.3
51,309	-				+1.2
51,333	+				-1.3
51,337	+				+0.0
51,337	+				-0.5
51,370	+				-1.2
51,370	+				-0.0
51,370	+				-1.8
51,371	-				-0.4
51,371	-				+1.1
51,490	+		PfGW456L13_44	0.15	-0.7
51,490	+		PfGW456L13_44	0.15	+1.2
51,490	+		PfGW456L13_44	0.15	-0.1
51,490	+		PfGW456L13_44	0.15	-0.4
51,490	+		PfGW456L13_44	0.15	+0.7
51,491	-		PfGW456L13_44	0.15	+0.2
51,491	-		PfGW456L13_44	0.15	+2.5
51,491	-		PfGW456L13_44	0.15	+1.3
51,491	-		PfGW456L13_44	0.15	+0.1
51,491	-		PfGW456L13_44	0.15	+1.9
51,491	-		PfGW456L13_44	0.15	+1.8
51,491	-		PfGW456L13_44	0.15	+1.9
51,763	+		PfGW456L13_44	0.88	-0.2
51,901	-				+0.5
51,906	-				+1.7
51,924	+				+0.1
51,924	+				+0.8
51,924	+				-0.6
51,925	-				-1.2
51,925	-				-2.5
51,925	-				+1.5
51,925	-				-1.2
52,050	-				-1.3
52,089	+				+1.3
52,089	+				+0.0
52,089	+				+0.2
52,089	+				-0.2
52,090	-				-0.9
52,090	-				+0.5
52,111	+				-0.1
52,111	+				-0.4
52,111	+				-1.0
52,112	-				+0.4
52,112	-				+0.1
52,112	-				+0.3
52,113	+				-2.3
52,113	+				-0.9
52,113	+				-0.2
52,113	+				-0.8
52,114	-				+0.9
52,114	-				+1.3
52,150	+				-1.5
52,151	-				-1.3
52,184	-		PfGW456L13_45	0.13	+1.8
52,184	-		PfGW456L13_45	0.13	-0.6
52,184	-		PfGW456L13_45	0.13	+0.3