Experiment: Lomefloxacin 0.0004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2912 and PfGW456L13_2913 are separated by 154 nucleotides PfGW456L13_2913 and PfGW456L13_2914 are separated by 0 nucleotides
PfGW456L13_2912 - Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), at 3,252,303 to 3,253,370
_2912
PfGW456L13_2913 - Alcohol dehydrogenase (EC 1.1.1.1), at 3,253,525 to 3,254,508
_2913
PfGW456L13_2914 - ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 3,254,509 to 3,255,573
_2914
Position (kb)
3253
3254
3255 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3252.645 kb on - strand, within PfGW456L13_2912 at 3252.829 kb on + strand, within PfGW456L13_2912 at 3253.078 kb on + strand, within PfGW456L13_2912 at 3253.078 kb on + strand, within PfGW456L13_2912 at 3253.078 kb on + strand, within PfGW456L13_2912 at 3253.078 kb on + strand, within PfGW456L13_2912 at 3253.079 kb on - strand, within PfGW456L13_2912 at 3253.079 kb on - strand, within PfGW456L13_2912 at 3253.079 kb on - strand, within PfGW456L13_2912 at 3253.079 kb on - strand, within PfGW456L13_2912 at 3253.079 kb on - strand, within PfGW456L13_2912 at 3253.079 kb on - strand, within PfGW456L13_2912 at 3253.081 kb on + strand, within PfGW456L13_2912 at 3253.081 kb on + strand, within PfGW456L13_2912 at 3253.081 kb on + strand, within PfGW456L13_2912 at 3253.081 kb on + strand, within PfGW456L13_2912 at 3253.081 kb on + strand, within PfGW456L13_2912 at 3253.082 kb on - strand, within PfGW456L13_2912 at 3253.082 kb on - strand, within PfGW456L13_2912 at 3253.082 kb on - strand, within PfGW456L13_2912 at 3253.082 kb on - strand, within PfGW456L13_2912 at 3253.082 kb on - strand, within PfGW456L13_2912 at 3253.352 kb on + strand at 3253.410 kb on - strand at 3253.410 kb on - strand at 3253.410 kb on - strand at 3253.424 kb on - strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.472 kb on + strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.473 kb on - strand at 3253.479 kb on + strand at 3253.479 kb on + strand at 3253.479 kb on + strand at 3253.479 kb on + strand at 3253.480 kb on - strand at 3253.633 kb on + strand, within PfGW456L13_2913 at 3253.634 kb on - strand, within PfGW456L13_2913 at 3253.756 kb on + strand, within PfGW456L13_2913 at 3253.756 kb on + strand, within PfGW456L13_2913 at 3253.756 kb on + strand, within PfGW456L13_2913 at 3253.757 kb on - strand, within PfGW456L13_2913 at 3253.757 kb on - strand, within PfGW456L13_2913 at 3254.084 kb on - strand, within PfGW456L13_2913 at 3254.693 kb on + strand, within PfGW456L13_2914 at 3254.693 kb on + strand, within PfGW456L13_2914 at 3254.694 kb on - strand, within PfGW456L13_2914 at 3255.065 kb on + strand, within PfGW456L13_2914 at 3255.065 kb on + strand, within PfGW456L13_2914 at 3255.098 kb on + strand, within PfGW456L13_2914 at 3255.099 kb on - strand, within PfGW456L13_2914 at 3255.171 kb on - strand at 3255.455 kb on + strand, within PfGW456L13_2914 at 3255.455 kb on + strand, within PfGW456L13_2914 at 3255.456 kb on - strand, within PfGW456L13_2914 at 3255.479 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.0004 mM remove 3,252,645 - PfGW456L13_2912 0.32 -0.0 3,252,829 + PfGW456L13_2912 0.49 -1.3 3,253,078 + PfGW456L13_2912 0.73 -0.9 3,253,078 + PfGW456L13_2912 0.73 -0.4 3,253,078 + PfGW456L13_2912 0.73 +1.6 3,253,078 + PfGW456L13_2912 0.73 -1.2 3,253,079 - PfGW456L13_2912 0.73 +1.8 3,253,079 - PfGW456L13_2912 0.73 +1.3 3,253,079 - PfGW456L13_2912 0.73 -0.6 3,253,079 - PfGW456L13_2912 0.73 +0.6 3,253,079 - PfGW456L13_2912 0.73 +1.1 3,253,079 - PfGW456L13_2912 0.73 +1.5 3,253,081 + PfGW456L13_2912 0.73 -0.2 3,253,081 + PfGW456L13_2912 0.73 +0.8 3,253,081 + PfGW456L13_2912 0.73 +2.2 3,253,081 + PfGW456L13_2912 0.73 -0.8 3,253,081 + PfGW456L13_2912 0.73 -1.1 3,253,082 - PfGW456L13_2912 0.73 +0.3 3,253,082 - PfGW456L13_2912 0.73 -1.4 3,253,082 - PfGW456L13_2912 0.73 +1.3 3,253,082 - PfGW456L13_2912 0.73 -0.4 3,253,082 - PfGW456L13_2912 0.73 +0.8 3,253,352 + -2.5 3,253,410 - +0.2 3,253,410 - -1.6 3,253,410 - +0.7 3,253,424 - -0.6 3,253,472 + +1.1 3,253,472 + +2.2 3,253,472 + -0.8 3,253,472 + -0.2 3,253,472 + -1.6 3,253,472 + +0.3 3,253,472 + +2.0 3,253,472 + -0.8 3,253,472 + -1.1 3,253,472 + -2.2 3,253,472 + +0.3 3,253,472 + -0.5 3,253,472 + +1.6 3,253,472 + -0.2 3,253,472 + +0.6 3,253,472 + -0.2 3,253,472 + +1.2 3,253,472 + -1.2 3,253,472 + -1.5 3,253,473 - +0.3 3,253,473 - +0.8 3,253,473 - +0.2 3,253,473 - -2.4 3,253,473 - -0.6 3,253,473 - +1.9 3,253,473 - +0.2 3,253,473 - +0.2 3,253,473 - +0.6 3,253,473 - +0.7 3,253,473 - +0.9 3,253,473 - -0.0 3,253,473 - +0.2 3,253,473 - +2.2 3,253,479 + -1.3 3,253,479 + -0.8 3,253,479 + +0.2 3,253,479 + -1.2 3,253,480 - +0.4 3,253,633 + PfGW456L13_2913 0.11 +2.0 3,253,634 - PfGW456L13_2913 0.11 +1.6 3,253,756 + PfGW456L13_2913 0.23 -0.3 3,253,756 + PfGW456L13_2913 0.23 +0.4 3,253,756 + PfGW456L13_2913 0.23 +0.2 3,253,757 - PfGW456L13_2913 0.24 -0.8 3,253,757 - PfGW456L13_2913 0.24 +2.5 3,254,084 - PfGW456L13_2913 0.57 +0.8 3,254,693 + PfGW456L13_2914 0.17 -0.2 3,254,693 + PfGW456L13_2914 0.17 +1.2 3,254,694 - PfGW456L13_2914 0.17 +1.9 3,255,065 + PfGW456L13_2914 0.52 -0.3 3,255,065 + PfGW456L13_2914 0.52 +0.6 3,255,098 + PfGW456L13_2914 0.55 +0.0 3,255,099 - PfGW456L13_2914 0.55 -0.2 3,255,171 - +1.6 3,255,455 + PfGW456L13_2914 0.89 +2.0 3,255,455 + PfGW456L13_2914 0.89 -0.2 3,255,456 - PfGW456L13_2914 0.89 -0.2 3,255,479 + +0.6
Or see this region's nucleotide sequence