Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1921

Experiment: Lomefloxacin 0.0004 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.0004 mM
2,113,980	+		PfGW456L13_1920	0.64	+0.9
2,113,980	+		PfGW456L13_1920	0.64	+1.0
2,113,980	+		PfGW456L13_1920	0.64	-0.9
2,113,980	+		PfGW456L13_1920	0.64	-1.1
2,113,980	+		PfGW456L13_1920	0.64	-0.4
2,113,981	-		PfGW456L13_1920	0.64	-0.9
2,113,981	-		PfGW456L13_1920	0.64	+0.8
2,113,981	-		PfGW456L13_1920	0.64	-0.6
2,113,981	-		PfGW456L13_1920	0.64	-1.0
2,113,981	-		PfGW456L13_1920	0.64	+0.6
2,113,983	+		PfGW456L13_1920	0.64	+0.9
2,113,984	-		PfGW456L13_1920	0.64	+0.2
2,113,984	-		PfGW456L13_1920	0.64	-2.2
2,113,984	-		PfGW456L13_1920	0.64	+0.6
2,113,984	-		PfGW456L13_1920	0.64	+0.2
2,114,293	+				-1.7
2,114,293	+				+0.8
2,114,293	+				+1.0
2,114,294	-				+1.5
2,114,294	-				+0.8
2,114,294	-				-1.7
2,114,346	+				-0.4
2,114,346	+				-0.5
2,114,346	+				-2.5
2,114,346	+				+0.5
2,114,347	-				-0.4
2,114,347	-				-0.2
2,114,485	+				-1.4
2,114,493	+				-0.7
2,114,494	-				+0.5
2,114,494	-				-0.1
2,114,556	+				-1.7
2,114,557	-				+1.3
2,114,640	+				-1.5
2,114,640	+				-1.4
2,114,641	-				+2.0
2,114,641	-				+0.6
2,114,641	-				+0.2
2,114,641	-				+0.3
2,114,641	-				-0.1
2,114,652	+				+0.9
2,114,653	-				-2.8
2,114,653	-				-0.0
2,114,653	-				-1.1
2,114,653	-				-1.4
2,114,653	-				+0.0
2,114,653	-				+0.5
2,114,653	-				-0.5
2,114,656	+				+2.2
2,114,656	+				-0.0
2,114,656	+				+0.1
2,114,656	+				-0.4
2,114,656	+				-1.9
2,114,656	+				-2.5
2,114,656	+				-1.1
2,114,657	-				-0.5
2,114,657	-				-2.1
2,114,657	-				-1.7
2,114,657	-				-0.4
2,114,657	-				+1.4
2,114,657	-				-0.0
2,114,747	-				+0.7
2,114,855	+				-0.1
2,114,855	+				-0.5
2,114,855	+				-2.2
2,114,856	-				+0.6
2,114,856	-				+0.5
2,114,856	-				-0.7
2,114,856	-				-0.7
2,114,856	-				+0.8
2,114,866	+				+1.6
2,114,867	-				-1.5
2,114,867	-				+0.8
2,114,911	+				+1.7
2,114,911	+				+0.4
2,114,912	-				+1.7
2,114,912	-				-1.2
2,114,912	-				-1.7
2,114,970	+				+0.3
2,114,970	+				+2.4
2,114,971	-				+0.1
2,114,971	-				+0.8
2,114,971	-				-0.4
2,114,987	+				-0.9
2,114,987	+				-1.6
2,114,987	+				+0.6
2,114,987	+				-1.1
2,114,987	+				-0.1
2,114,987	+				-1.5
2,114,988	-				-0.1
2,114,988	-				-0.2
2,114,988	-				-0.9
2,114,988	-				-0.5
2,114,988	-				+1.5
2,114,988	-				-1.8
2,115,202	+		PfGW456L13_1921	0.17	+0.0
2,115,202	+		PfGW456L13_1921	0.17	-0.0
2,115,202	+		PfGW456L13_1921	0.17	+1.0
2,115,203	-		PfGW456L13_1921	0.17	-2.5
2,115,203	-		PfGW456L13_1921	0.17	-1.5
2,115,205	+		PfGW456L13_1921	0.17	+0.3
2,115,206	-		PfGW456L13_1921	0.17	-1.4
2,115,220	+		PfGW456L13_1921	0.18	-0.6
2,115,220	+		PfGW456L13_1921	0.18	+0.5
2,115,220	+		PfGW456L13_1921	0.18	-1.1
2,115,220	+		PfGW456L13_1921	0.18	-1.4
2,115,319	+		PfGW456L13_1921	0.26	+0.5
2,115,319	+		PfGW456L13_1921	0.26	-0.4
2,115,319	+		PfGW456L13_1921	0.26	-0.4
2,115,320	-		PfGW456L13_1921	0.26	+0.3
2,115,320	-		PfGW456L13_1921	0.26	-1.1
2,115,320	-		PfGW456L13_1921	0.26	-0.7
2,115,514	+		PfGW456L13_1921	0.41	+0.0
2,115,514	+		PfGW456L13_1921	0.41	-0.2
2,115,669	-		PfGW456L13_1921	0.52	-0.1
2,115,669	-		PfGW456L13_1921	0.52	+0.1
2,115,685	+		PfGW456L13_1921	0.54	-0.4
2,115,685	+		PfGW456L13_1921	0.54	-1.9
2,115,685	+		PfGW456L13_1921	0.54	-1.5
2,115,685	+		PfGW456L13_1921	0.54	+0.2
2,115,685	+		PfGW456L13_1921	0.54	+1.0
2,115,686	-		PfGW456L13_1921	0.54	-0.9
2,115,686	-		PfGW456L13_1921	0.54	-1.5
2,115,686	-		PfGW456L13_1921	0.54	-0.9
2,115,686	-		PfGW456L13_1921	0.54	-1.1
2,115,686	-		PfGW456L13_1921	0.54	+1.0
2,115,718	+		PfGW456L13_1921	0.56	+0.5
2,115,718	+		PfGW456L13_1921	0.56	-2.7
2,115,719	-		PfGW456L13_1921	0.56	-0.4
2,115,719	-		PfGW456L13_1921	0.56	-1.1
2,115,744	+		PfGW456L13_1921	0.58	+0.4
2,115,803	+		PfGW456L13_1921	0.63	+0.5
2,115,804	-		PfGW456L13_1921	0.63	-0.7
2,116,294	+				-0.1
2,116,294	+				+0.9
2,116,295	-				-0.7
2,116,408	-				+0.4
2,116,408	-				-0.4
2,116,408	-				+0.9
2,116,408	-				-1.4
2,116,408	-				+0.9
2,116,408	-				-1.7
2,116,460	-				-0.4
2,116,461	+				-1.4
2,116,461	+				+2.3
2,116,461	+				-0.3
2,116,462	-				+1.5
2,116,462	-				-0.3
2,116,462	-				+1.3
2,116,462	-				+0.6
2,116,502	-				-1.4
2,116,521	+				-1.2
2,116,522	-				-0.6
2,116,594	+				-0.0
2,116,594	+				-2.2
2,116,594	+				-0.9
2,116,595	-				-1.1
2,116,595	-				-2.1
2,116,595	-				+0.2
2,116,683	-		PfGW456L13_1922	0.23	-0.1
2,116,683	-		PfGW456L13_1922	0.23	-0.7
2,116,702	+		PfGW456L13_1922	0.26	-1.3
2,116,702	+		PfGW456L13_1922	0.26	+1.2
2,116,702	+		PfGW456L13_1922	0.26	-0.5
2,116,702	+		PfGW456L13_1922	0.26	-2.0
2,116,702	+		PfGW456L13_1922	0.26	+0.5
2,116,703	-		PfGW456L13_1922	0.27	+1.6
2,116,703	-		PfGW456L13_1922	0.27	-0.2
2,116,703	-		PfGW456L13_1922	0.27	-0.4
2,116,703	-		PfGW456L13_1922	0.27	+0.5
2,116,758	-		PfGW456L13_1922	0.35	-0.5
2,116,962	-		PfGW456L13_1922	0.67	+1.5
2,116,962	-		PfGW456L13_1922	0.67	-1.0
2,116,962	-		PfGW456L13_1922	0.67	-0.3
2,117,211	+				-0.6
2,117,211	+				-2.2
2,117,211	+				+1.0
2,117,211	+				+0.2
2,117,211	+				-0.9
2,117,211	+				+0.8
2,117,211	+				+0.5
2,117,212	-				+0.8
2,117,212	-				+0.8
2,117,212	-				+1.4
2,117,212	-				-0.0
2,117,212	-				+0.2
2,117,212	-				+0.6
2,117,212	-				-1.4
2,117,265	+				+1.0
2,117,265	+				+0.9
2,117,265	+				+0.3
2,117,265	+				-0.7
2,117,265	+				-1.4
2,117,265	+				+0.9
2,117,266	-				-0.5
2,117,266	-				-1.7
2,117,266	-				+1.3
2,117,274	-				+0.5
2,117,287	-				+0.9