Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1784

Experiment: Lomefloxacin 0.0004 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lomefloxacin 0.0004 mM
1,963,830	+		PfGW456L13_1783	0.23	-1.5
1,963,841	+		PfGW456L13_1783	0.24	-0.7
1,963,841	+		PfGW456L13_1783	0.24	+1.9
1,963,946	+		PfGW456L13_1783	0.35	-0.1
1,963,946	+		PfGW456L13_1783	0.35	+0.1
1,963,947	-		PfGW456L13_1783	0.35	-0.1
1,964,027	+		PfGW456L13_1783	0.43	+0.4
1,964,027	+		PfGW456L13_1783	0.43	-1.5
1,964,027	+		PfGW456L13_1783	0.43	+1.0
1,964,027	+		PfGW456L13_1783	0.43	+0.0
1,964,027	+		PfGW456L13_1783	0.43	-0.0
1,964,028	-		PfGW456L13_1783	0.43	-0.5
1,964,028	-		PfGW456L13_1783	0.43	+2.2
1,964,273	+		PfGW456L13_1783	0.68	+0.8
1,964,273	+		PfGW456L13_1783	0.68	-0.3
1,964,273	+		PfGW456L13_1783	0.68	-1.1
1,964,273	+		PfGW456L13_1783	0.68	+0.8
1,964,273	+		PfGW456L13_1783	0.68	-0.6
1,964,273	+		PfGW456L13_1783	0.68	+0.2
1,964,274	-		PfGW456L13_1783	0.68	-0.7
1,964,274	-		PfGW456L13_1783	0.68	-0.8
1,964,274	-		PfGW456L13_1783	0.68	+0.8
1,964,274	-		PfGW456L13_1783	0.68	-0.5
1,964,321	+		PfGW456L13_1783	0.73	+1.6
1,964,321	+		PfGW456L13_1783	0.73	-0.4
1,964,321	+		PfGW456L13_1783	0.73	-2.2
1,964,321	+		PfGW456L13_1783	0.73	+0.4
1,964,322	-		PfGW456L13_1783	0.73	-0.7
1,964,322	-		PfGW456L13_1783	0.73	+0.6
1,964,322	-		PfGW456L13_1783	0.73	-1.5
1,964,381	+		PfGW456L13_1783	0.79	+1.1
1,964,510	+				-0.6
1,964,510	+				+0.3
1,964,511	-				-0.4
1,964,519	+				+2.7
1,964,520	-				-0.9
1,964,520	-				-1.1
1,964,520	-				+0.9
1,964,520	-				-0.8
1,964,520	-				+0.3
1,964,662	+				+0.5
1,964,662	+				+3.1
1,964,662	+				+0.5
1,964,662	+				-0.2
1,964,663	-				+0.3
1,964,663	-				+1.1
1,964,664	+				+0.8
1,964,664	+				+0.1
1,964,665	-				-0.8
1,964,677	-				-1.7
1,964,685	+				-0.1
1,964,685	+				+0.3
1,964,685	+				-0.5
1,964,686	-				+0.8
1,964,686	-				+0.1
1,964,686	-				-1.5
1,964,686	-				-0.7
1,964,697	+				+0.7
1,964,697	+				-0.6
1,964,697	+				-1.7
1,964,698	-				-1.5
1,964,750	+				-0.6
1,964,750	+				-3.2
1,964,751	-				-3.3
1,964,751	-				-2.9
1,965,012	+		PfGW456L13_1784	0.35	-1.3
1,965,012	+		PfGW456L13_1784	0.35	-0.0
1,965,013	-		PfGW456L13_1784	0.35	-1.7
1,965,529	-				-0.8
1,965,529	-				-2.6
1,965,581	-				-1.0
1,965,681	+				-0.3
1,965,682	-				-0.8
1,965,682	-				+0.6
1,965,731	+				+0.1
1,965,731	+				+0.4
1,965,731	+				+0.1
1,965,731	+				+0.5
1,965,731	+				-0.3
1,965,731	+				-0.5
1,965,731	+				-2.5
1,965,731	+				+1.0
1,965,731	+				-1.0
1,965,731	+				+0.5
1,965,731	+				-1.8
1,965,731	+				-0.9
1,965,731	+				-0.2
1,965,731	+				-0.4
1,965,731	+				-3.0
1,965,731	+				-1.5
1,965,732	-				-0.4
1,965,732	-				+1.1
1,965,732	-				-1.5
1,965,732	-				+0.8
1,965,732	-				-0.2
1,965,732	-				-2.1
1,965,732	-				-0.6
1,965,732	-				-1.5
1,965,732	-				-1.0
1,965,732	-				-0.4
1,965,732	-				-0.5
1,965,732	-				-1.2
1,965,751	+				-1.4
1,965,757	+				+0.2
1,965,757	+				-0.9
1,965,757	+				-1.8
1,965,757	+				+1.0
1,965,757	+				+0.8
1,965,757	+				-1.7
1,965,757	+				+0.1
1,965,757	+				-0.2
1,965,757	+				-0.8
1,965,757	+				+0.5
1,965,758	-				+0.8
1,965,758	-				-0.6
1,965,758	-				-1.4
1,965,758	-				+1.4
1,965,758	-				-1.5
1,965,758	-				-1.8
1,965,758	-				+2.5
1,965,758	-				-1.5
1,965,761	+				+0.1
1,965,761	+				+1.0
1,965,761	+				+0.5
1,965,761	+				-0.8
1,965,761	+				-2.1
1,965,762	-				-0.5
1,965,828	+				+0.8
1,965,828	+				-2.0
1,965,828	+				+0.3
1,965,828	+				+0.4
1,965,828	+				-0.5
1,965,828	+				-0.5
1,965,828	+				-0.4
1,965,829	-				+0.1
1,965,834	+				+0.0
1,965,834	+				-1.7
1,965,834	+				+1.1
1,965,834	+				-0.1
1,965,834	+				+0.8
1,965,834	+				-0.4
1,965,835	-				+1.2
1,965,835	-				-0.3
1,965,835	-				-2.6
1,965,835	-				-1.1
1,965,835	-				-1.7
1,965,943	+		PfGW456L13_1785	0.15	-0.7
1,965,943	+		PfGW456L13_1785	0.15	+1.3
1,965,943	+				+0.3
1,965,944	-		PfGW456L13_1785	0.15	-2.1
1,965,946	+		PfGW456L13_1785	0.16	-0.0
1,965,946	+		PfGW456L13_1785	0.16	-0.4
1,965,946	+		PfGW456L13_1785	0.16	-2.0
1,965,947	-		PfGW456L13_1785	0.16	-1.7
1,965,947	-		PfGW456L13_1785	0.16	+0.5
1,965,947	-		PfGW456L13_1785	0.16	-1.5
1,965,947	-		PfGW456L13_1785	0.16	-1.2
1,966,015	+		PfGW456L13_1785	0.24	+1.7
1,966,015	+		PfGW456L13_1785	0.24	-2.0
1,966,016	-		PfGW456L13_1785	0.24	-1.5
1,966,016	-		PfGW456L13_1785	0.24	-0.1
1,966,225	+		PfGW456L13_1785	0.48	+0.5
1,966,225	+		PfGW456L13_1785	0.48	+0.9
1,966,225	+		PfGW456L13_1785	0.48	+1.7
1,966,225	+		PfGW456L13_1785	0.48	+0.0
1,966,226	-		PfGW456L13_1785	0.49	+1.8
1,966,228	+		PfGW456L13_1785	0.49	+0.6
1,966,228	+		PfGW456L13_1785	0.49	-0.4
1,966,228	+		PfGW456L13_1785	0.49	+0.8
1,966,228	+		PfGW456L13_1785	0.49	+0.5
1,966,229	-		PfGW456L13_1785	0.49	+0.8
1,966,229	-		PfGW456L13_1785	0.49	-0.7
1,966,264	+		PfGW456L13_1785	0.53	+0.8
1,966,265	-		PfGW456L13_1785	0.53	-1.1
1,966,267	+		PfGW456L13_1785	0.53	+1.8
1,966,268	-		PfGW456L13_1785	0.53	-1.2
1,966,268	-		PfGW456L13_1785	0.53	-1.8
1,966,268	-		PfGW456L13_1785	0.53	+1.3
1,966,268	-		PfGW456L13_1785	0.53	-1.2
1,966,268	-		PfGW456L13_1785	0.53	+0.3
1,966,399	+		PfGW456L13_1785	0.69	-3.0
1,966,399	+		PfGW456L13_1785	0.69	-2.8
1,966,399	+		PfGW456L13_1785	0.69	-0.5
1,966,399	+		PfGW456L13_1785	0.69	+0.9
1,966,399	+		PfGW456L13_1785	0.69	-0.9
1,966,399	+		PfGW456L13_1785	0.69	-0.4
1,966,399	+		PfGW456L13_1785	0.69	-1.2
1,966,399	+		PfGW456L13_1785	0.69	-2.0
1,966,399	+		PfGW456L13_1785	0.69	-0.0
1,966,399	+		PfGW456L13_1785	0.69	-2.1
1,966,399	+		PfGW456L13_1785	0.69	-0.1
1,966,399	+		PfGW456L13_1785	0.69	+0.9
1,966,400	-		PfGW456L13_1785	0.69	-1.8
1,966,400	-		PfGW456L13_1785	0.69	+1.6
1,966,400	-		PfGW456L13_1785	0.69	+0.1
1,966,400	-		PfGW456L13_1785	0.69	+0.5
1,966,432	+		PfGW456L13_1785	0.73	-0.5
1,966,433	-		PfGW456L13_1785	0.73	-1.8
1,966,546	+		PfGW456L13_1785	0.86	-0.7