Experiment: Lomefloxacin 0.0004 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1016 and PfGW456L13_1017 are separated by 27 nucleotides PfGW456L13_1017 and PfGW456L13_1018 are separated by 79 nucleotides PfGW456L13_1018 and PfGW456L13_1019 overlap by 1 nucleotides
PfGW456L13_1016 - Aspartate carbamoyltransferase (EC 2.1.3.2), at 1,127,333 to 1,128,352
_1016
PfGW456L13_1017 - Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR, at 1,128,380 to 1,128,883
_1017
PfGW456L13_1018 - Putative Holliday junction resolvase YggF, at 1,128,963 to 1,129,400
_1018
PfGW456L13_1019 - UPF0301 protein YqgE, at 1,129,400 to 1,129,972
_1019
Position (kb)
1128
1129 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1128.372 kb on - strand at 1128.547 kb on - strand, within PfGW456L13_1017 at 1128.826 kb on - strand, within PfGW456L13_1017 at 1128.936 kb on + strand at 1128.937 kb on - strand at 1128.937 kb on - strand at 1128.937 kb on - strand at 1128.937 kb on - strand at 1128.937 kb on - strand at 1128.937 kb on - strand at 1128.941 kb on - strand at 1128.941 kb on - strand at 1128.941 kb on - strand at 1129.006 kb on - strand at 1129.006 kb on - strand at 1129.006 kb on - strand at 1129.006 kb on - strand at 1129.006 kb on - strand at 1129.006 kb on - strand at 1129.576 kb on - strand, within PfGW456L13_1019 at 1129.755 kb on - strand, within PfGW456L13_1019 at 1129.755 kb on - strand, within PfGW456L13_1019 at 1129.755 kb on - strand, within PfGW456L13_1019 at 1129.755 kb on - strand, within PfGW456L13_1019 at 1129.755 kb on - strand, within PfGW456L13_1019 at 1129.782 kb on - strand, within PfGW456L13_1019 at 1129.782 kb on - strand, within PfGW456L13_1019 at 1129.882 kb on - strand, within PfGW456L13_1019 at 1129.882 kb on - strand, within PfGW456L13_1019 at 1129.882 kb on - strand, within PfGW456L13_1019 at 1129.882 kb on - strand, within PfGW456L13_1019 at 1129.882 kb on - strand, within PfGW456L13_1019 at 1129.882 kb on - strand, within PfGW456L13_1019
Per-strain Table
Position Strand Gene LocusTag Fraction Lomefloxacin 0.0004 mM remove 1,128,372 - +0.3 1,128,547 - PfGW456L13_1017 0.33 +0.1 1,128,826 - PfGW456L13_1017 0.88 -0.3 1,128,936 + -1.8 1,128,937 - +0.6 1,128,937 - -0.9 1,128,937 - +0.3 1,128,937 - +1.5 1,128,937 - +1.6 1,128,937 - +1.1 1,128,941 - +0.7 1,128,941 - -1.0 1,128,941 - +0.1 1,129,006 - +0.0 1,129,006 - +0.3 1,129,006 - +0.9 1,129,006 - -0.8 1,129,006 - -1.5 1,129,006 - -1.9 1,129,576 - PfGW456L13_1019 0.31 +0.0 1,129,755 - PfGW456L13_1019 0.62 +0.4 1,129,755 - PfGW456L13_1019 0.62 +0.2 1,129,755 - PfGW456L13_1019 0.62 +0.6 1,129,755 - PfGW456L13_1019 0.62 +3.8 1,129,755 - PfGW456L13_1019 0.62 +0.1 1,129,782 - PfGW456L13_1019 0.67 +0.5 1,129,782 - PfGW456L13_1019 0.67 +1.7 1,129,882 - PfGW456L13_1019 0.84 -1.4 1,129,882 - PfGW456L13_1019 0.84 -1.0 1,129,882 - PfGW456L13_1019 0.84 +0.4 1,129,882 - PfGW456L13_1019 0.84 -1.5 1,129,882 - PfGW456L13_1019 0.84 +1.0 1,129,882 - PfGW456L13_1019 0.84 -0.0
Or see this region's nucleotide sequence