Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4256 and Echvi_4257 are separated by 102 nucleotides Echvi_4257 and Echvi_4258 are separated by 47 nucleotides
Echvi_4256: Echvi_4256 - TonB-linked outer membrane protein, SusC/RagA family, at 5,104,917 to 5,107,745
_4256
Echvi_4257: Echvi_4257 - SusD family., at 5,107,848 to 5,109,551
_4257
Echvi_4258: Echvi_4258 - TonB-linked outer membrane protein, SusC/RagA family, at 5,109,599 to 5,112,673
_4258
Position (kb)
5107
5108
5109
5110 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5106.899 kb on + strand, within Echvi_4256 at 5106.947 kb on - strand, within Echvi_4256 at 5106.983 kb on + strand, within Echvi_4256 at 5106.983 kb on + strand, within Echvi_4256 at 5107.133 kb on - strand, within Echvi_4256 at 5107.133 kb on - strand, within Echvi_4256 at 5107.150 kb on + strand, within Echvi_4256 at 5107.258 kb on - strand, within Echvi_4256 at 5107.291 kb on - strand, within Echvi_4256 at 5107.291 kb on - strand, within Echvi_4256 at 5107.317 kb on + strand, within Echvi_4256 at 5107.317 kb on + strand, within Echvi_4256 at 5107.318 kb on - strand, within Echvi_4256 at 5107.318 kb on - strand, within Echvi_4256 at 5107.371 kb on + strand, within Echvi_4256 at 5107.423 kb on - strand, within Echvi_4256 at 5107.497 kb on - strand at 5107.542 kb on + strand at 5107.584 kb on - strand at 5107.589 kb on - strand at 5107.769 kb on - strand at 5107.869 kb on + strand at 5107.873 kb on + strand at 5107.874 kb on - strand at 5107.906 kb on + strand at 5107.906 kb on + strand at 5107.912 kb on + strand at 5107.913 kb on - strand at 5107.913 kb on - strand at 5107.986 kb on + strand at 5108.120 kb on + strand, within Echvi_4257 at 5108.134 kb on + strand, within Echvi_4257 at 5108.134 kb on + strand, within Echvi_4257 at 5108.154 kb on + strand, within Echvi_4257 at 5108.154 kb on + strand, within Echvi_4257 at 5108.154 kb on + strand, within Echvi_4257 at 5108.154 kb on + strand, within Echvi_4257 at 5108.155 kb on - strand, within Echvi_4257 at 5108.378 kb on + strand, within Echvi_4257 at 5108.437 kb on - strand, within Echvi_4257 at 5108.443 kb on + strand, within Echvi_4257 at 5108.480 kb on + strand, within Echvi_4257 at 5108.480 kb on + strand, within Echvi_4257 at 5108.492 kb on - strand, within Echvi_4257 at 5108.511 kb on + strand, within Echvi_4257 at 5108.511 kb on + strand, within Echvi_4257 at 5108.539 kb on + strand, within Echvi_4257 at 5108.587 kb on + strand, within Echvi_4257 at 5108.685 kb on + strand, within Echvi_4257 at 5108.686 kb on - strand, within Echvi_4257 at 5108.816 kb on - strand, within Echvi_4257 at 5108.854 kb on + strand, within Echvi_4257 at 5108.855 kb on - strand, within Echvi_4257 at 5108.855 kb on - strand, within Echvi_4257 at 5108.866 kb on + strand, within Echvi_4257 at 5108.890 kb on + strand, within Echvi_4257 at 5109.029 kb on + strand, within Echvi_4257 at 5109.029 kb on + strand, within Echvi_4257 at 5109.029 kb on + strand, within Echvi_4257 at 5109.115 kb on + strand, within Echvi_4257 at 5109.120 kb on + strand, within Echvi_4257 at 5109.121 kb on - strand, within Echvi_4257 at 5109.150 kb on + strand, within Echvi_4257 at 5109.151 kb on - strand, within Echvi_4257 at 5109.177 kb on - strand, within Echvi_4257 at 5109.232 kb on + strand, within Echvi_4257 at 5109.233 kb on - strand, within Echvi_4257 at 5109.288 kb on - strand, within Echvi_4257 at 5109.288 kb on - strand, within Echvi_4257 at 5109.317 kb on - strand, within Echvi_4257 at 5109.317 kb on - strand, within Echvi_4257 at 5109.317 kb on - strand, within Echvi_4257 at 5109.358 kb on + strand, within Echvi_4257 at 5109.358 kb on + strand, within Echvi_4257 at 5109.359 kb on - strand, within Echvi_4257 at 5109.359 kb on - strand, within Echvi_4257 at 5109.359 kb on - strand, within Echvi_4257 at 5109.362 kb on + strand, within Echvi_4257 at 5109.362 kb on + strand, within Echvi_4257 at 5109.362 kb on + strand, within Echvi_4257 at 5109.362 kb on + strand, within Echvi_4257 at 5109.362 kb on + strand, within Echvi_4257 at 5109.363 kb on - strand, within Echvi_4257 at 5109.363 kb on - strand, within Echvi_4257 at 5109.415 kb on + strand at 5109.415 kb on + strand at 5109.416 kb on - strand at 5109.416 kb on - strand at 5109.450 kb on - strand at 5109.468 kb on + strand at 5109.469 kb on - strand at 5109.520 kb on + strand at 5109.553 kb on + strand at 5109.553 kb on + strand at 5109.555 kb on + strand at 5109.555 kb on + strand at 5109.555 kb on + strand at 5109.555 kb on + strand at 5109.555 kb on + strand at 5109.555 kb on + strand at 5109.556 kb on - strand at 5109.556 kb on - strand at 5109.556 kb on - strand at 5109.558 kb on + strand at 5109.558 kb on + strand at 5109.559 kb on - strand at 5109.559 kb on - strand at 5109.627 kb on + strand at 5109.628 kb on - strand at 5109.778 kb on + strand at 5109.811 kb on - strand at 5110.000 kb on - strand, within Echvi_4258 at 5110.053 kb on + strand, within Echvi_4258 at 5110.053 kb on + strand, within Echvi_4258 at 5110.053 kb on + strand, within Echvi_4258 at 5110.054 kb on - strand, within Echvi_4258 at 5110.077 kb on + strand, within Echvi_4258 at 5110.078 kb on - strand, within Echvi_4258 at 5110.136 kb on - strand, within Echvi_4258 at 5110.159 kb on - strand, within Echvi_4258 at 5110.172 kb on + strand, within Echvi_4258 at 5110.234 kb on - strand, within Echvi_4258 at 5110.350 kb on + strand, within Echvi_4258 at 5110.350 kb on + strand, within Echvi_4258 at 5110.355 kb on - strand, within Echvi_4258 at 5110.436 kb on + strand, within Echvi_4258 at 5110.436 kb on + strand, within Echvi_4258 at 5110.437 kb on - strand, within Echvi_4258 at 5110.437 kb on - strand, within Echvi_4258 at 5110.437 kb on - strand, within Echvi_4258 at 5110.488 kb on + strand, within Echvi_4258 at 5110.498 kb on + strand, within Echvi_4258
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 5,106,899 + Echvi_4256 0.70 +1.2 5,106,947 - Echvi_4256 0.72 +0.6 5,106,983 + Echvi_4256 0.73 -2.1 5,106,983 + Echvi_4256 0.73 -1.2 5,107,133 - Echvi_4256 0.78 +0.4 5,107,133 - Echvi_4256 0.78 -0.8 5,107,150 + Echvi_4256 0.79 -2.3 5,107,258 - Echvi_4256 0.83 -0.4 5,107,291 - Echvi_4256 0.84 +1.9 5,107,291 - Echvi_4256 0.84 -2.1 5,107,317 + Echvi_4256 0.85 -0.9 5,107,317 + Echvi_4256 0.85 +1.0 5,107,318 - Echvi_4256 0.85 +0.8 5,107,318 - Echvi_4256 0.85 -0.4 5,107,371 + Echvi_4256 0.87 +0.2 5,107,423 - Echvi_4256 0.89 -0.9 5,107,497 - -1.9 5,107,542 + +0.0 5,107,584 - -1.8 5,107,589 - -0.1 5,107,769 - -1.0 5,107,869 + +0.2 5,107,873 + -2.1 5,107,874 - +0.4 5,107,906 + +0.0 5,107,906 + +0.1 5,107,912 + +0.3 5,107,913 - +2.0 5,107,913 - -0.8 5,107,986 + -1.7 5,108,120 + Echvi_4257 0.16 -1.7 5,108,134 + Echvi_4257 0.17 +0.6 5,108,134 + Echvi_4257 0.17 -1.7 5,108,154 + Echvi_4257 0.18 +0.9 5,108,154 + Echvi_4257 0.18 -3.1 5,108,154 + Echvi_4257 0.18 -0.6 5,108,154 + Echvi_4257 0.18 -1.1 5,108,155 - Echvi_4257 0.18 +1.5 5,108,378 + Echvi_4257 0.31 -2.1 5,108,437 - Echvi_4257 0.35 +1.5 5,108,443 + Echvi_4257 0.35 +0.3 5,108,480 + Echvi_4257 0.37 -0.2 5,108,480 + Echvi_4257 0.37 +0.4 5,108,492 - Echvi_4257 0.38 -2.9 5,108,511 + Echvi_4257 0.39 +2.0 5,108,511 + Echvi_4257 0.39 +0.2 5,108,539 + Echvi_4257 0.41 -1.5 5,108,587 + Echvi_4257 0.43 +1.2 5,108,685 + Echvi_4257 0.49 -0.0 5,108,686 - Echvi_4257 0.49 +0.9 5,108,816 - Echvi_4257 0.57 -0.1 5,108,854 + Echvi_4257 0.59 -0.4 5,108,855 - Echvi_4257 0.59 +0.9 5,108,855 - Echvi_4257 0.59 +1.7 5,108,866 + Echvi_4257 0.60 -2.3 5,108,890 + Echvi_4257 0.61 +0.8 5,109,029 + Echvi_4257 0.69 +1.2 5,109,029 + Echvi_4257 0.69 -3.1 5,109,029 + Echvi_4257 0.69 +0.9 5,109,115 + Echvi_4257 0.74 -2.1 5,109,120 + Echvi_4257 0.75 -0.1 5,109,121 - Echvi_4257 0.75 +0.3 5,109,150 + Echvi_4257 0.76 -0.2 5,109,151 - Echvi_4257 0.76 -0.2 5,109,177 - Echvi_4257 0.78 -1.5 5,109,232 + Echvi_4257 0.81 +1.2 5,109,233 - Echvi_4257 0.81 +1.0 5,109,288 - Echvi_4257 0.85 +2.4 5,109,288 - Echvi_4257 0.85 +1.5 5,109,317 - Echvi_4257 0.86 +0.5 5,109,317 - Echvi_4257 0.86 -0.2 5,109,317 - Echvi_4257 0.86 -0.5 5,109,358 + Echvi_4257 0.89 -1.5 5,109,358 + Echvi_4257 0.89 +1.3 5,109,359 - Echvi_4257 0.89 +0.9 5,109,359 - Echvi_4257 0.89 +0.0 5,109,359 - Echvi_4257 0.89 +1.2 5,109,362 + Echvi_4257 0.89 +1.0 5,109,362 + Echvi_4257 0.89 +0.1 5,109,362 + Echvi_4257 0.89 -1.5 5,109,362 + Echvi_4257 0.89 +0.2 5,109,362 + Echvi_4257 0.89 -1.6 5,109,363 - Echvi_4257 0.89 +0.2 5,109,363 - Echvi_4257 0.89 +0.2 5,109,415 + +2.4 5,109,415 + -1.1 5,109,416 - -1.6 5,109,416 - -2.3 5,109,450 - -0.6 5,109,468 + -0.7 5,109,469 - -1.3 5,109,520 + +0.9 5,109,553 + -0.8 5,109,553 + -1.3 5,109,555 + +0.3 5,109,555 + -1.8 5,109,555 + -2.8 5,109,555 + -0.9 5,109,555 + +0.0 5,109,555 + -1.4 5,109,556 - -0.4 5,109,556 - +2.1 5,109,556 - +2.1 5,109,558 + +0.2 5,109,558 + +0.0 5,109,559 - +0.2 5,109,559 - -0.0 5,109,627 + +1.3 5,109,628 - +1.5 5,109,778 + -0.4 5,109,811 - +1.2 5,110,000 - Echvi_4258 0.13 +1.2 5,110,053 + Echvi_4258 0.15 -1.1 5,110,053 + Echvi_4258 0.15 +0.2 5,110,053 + Echvi_4258 0.15 +0.7 5,110,054 - Echvi_4258 0.15 +0.2 5,110,077 + Echvi_4258 0.16 -1.7 5,110,078 - Echvi_4258 0.16 -0.3 5,110,136 - Echvi_4258 0.17 -0.5 5,110,159 - Echvi_4258 0.18 -0.1 5,110,172 + Echvi_4258 0.19 +1.6 5,110,234 - Echvi_4258 0.21 -0.2 5,110,350 + Echvi_4258 0.24 +0.6 5,110,350 + Echvi_4258 0.24 -0.4 5,110,355 - Echvi_4258 0.25 +0.1 5,110,436 + Echvi_4258 0.27 -1.1 5,110,436 + Echvi_4258 0.27 +1.5 5,110,437 - Echvi_4258 0.27 -0.4 5,110,437 - Echvi_4258 0.27 -0.1 5,110,437 - Echvi_4258 0.27 -2.9 5,110,488 + Echvi_4258 0.29 +1.3 5,110,498 + Echvi_4258 0.29 +0.0
Or see this region's nucleotide sequence