Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2463 and Echvi_2464 overlap by 4 nucleotides Echvi_2464 and Echvi_2465 are separated by 138 nucleotides Echvi_2465 and Echvi_2466 are separated by 109 nucleotides Echvi_2466 and Echvi_2467 are separated by 2 nucleotides
Echvi_2463: Echvi_2463 - Translation initiation factor 1 (eIF-1/SUI1) and related proteins, at 2,923,338 to 2,923,703
_2463
Echvi_2464: Echvi_2464 - Universal stress protein UspA and related nucleotide-binding proteins, at 2,923,700 to 2,924,548
_2464
Echvi_2465: Echvi_2465 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 2,924,687 to 2,925,601
_2465
Echvi_2466: Echvi_2466 - Glutathione peroxidase, at 2,925,711 to 2,926,307
_2466
Echvi_2467: Echvi_2467 - arginyl-tRNA synthetase, at 2,926,310 to 2,928,100
_2467
Position (kb)
2924
2925
2926 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2923.757 kb on + strand at 2923.758 kb on - strand at 2923.758 kb on - strand at 2923.759 kb on + strand at 2923.760 kb on - strand at 2923.811 kb on + strand, within Echvi_2464 at 2923.888 kb on + strand, within Echvi_2464 at 2923.888 kb on + strand, within Echvi_2464 at 2924.168 kb on + strand, within Echvi_2464 at 2924.253 kb on + strand, within Echvi_2464 at 2924.276 kb on - strand, within Echvi_2464 at 2924.287 kb on + strand, within Echvi_2464 at 2924.287 kb on + strand, within Echvi_2464 at 2924.287 kb on + strand, within Echvi_2464 at 2924.287 kb on + strand, within Echvi_2464 at 2924.288 kb on - strand, within Echvi_2464 at 2924.288 kb on - strand, within Echvi_2464 at 2924.288 kb on - strand, within Echvi_2464 at 2924.290 kb on - strand, within Echvi_2464 at 2924.453 kb on + strand, within Echvi_2464 at 2924.453 kb on + strand, within Echvi_2464 at 2924.454 kb on - strand, within Echvi_2464 at 2924.454 kb on - strand, within Echvi_2464 at 2924.548 kb on + strand at 2924.548 kb on + strand at 2924.565 kb on + strand at 2924.603 kb on + strand at 2924.625 kb on - strand at 2924.627 kb on + strand at 2924.628 kb on - strand at 2925.619 kb on - strand at 2925.636 kb on - strand at 2925.638 kb on - strand at 2925.800 kb on - strand, within Echvi_2466 at 2925.800 kb on - strand, within Echvi_2466 at 2925.803 kb on - strand, within Echvi_2466 at 2925.822 kb on - strand, within Echvi_2466 at 2925.935 kb on - strand, within Echvi_2466 at 2926.064 kb on - strand, within Echvi_2466 at 2926.093 kb on - strand, within Echvi_2466 at 2926.175 kb on - strand, within Echvi_2466 at 2926.297 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 2,923,757 + -2.6 2,923,758 - +1.0 2,923,758 - +0.0 2,923,759 + +0.7 2,923,760 - +1.0 2,923,811 + Echvi_2464 0.13 -2.0 2,923,888 + Echvi_2464 0.22 +0.9 2,923,888 + Echvi_2464 0.22 -1.2 2,924,168 + Echvi_2464 0.55 -0.9 2,924,253 + Echvi_2464 0.65 -0.2 2,924,276 - Echvi_2464 0.68 -1.0 2,924,287 + Echvi_2464 0.69 +0.5 2,924,287 + Echvi_2464 0.69 -2.7 2,924,287 + Echvi_2464 0.69 +0.3 2,924,287 + Echvi_2464 0.69 +0.3 2,924,288 - Echvi_2464 0.69 -3.1 2,924,288 - Echvi_2464 0.69 -2.3 2,924,288 - Echvi_2464 0.69 +0.2 2,924,290 - Echvi_2464 0.69 -1.9 2,924,453 + Echvi_2464 0.89 +0.6 2,924,453 + Echvi_2464 0.89 +1.0 2,924,454 - Echvi_2464 0.89 -0.7 2,924,454 - Echvi_2464 0.89 -2.4 2,924,548 + +1.1 2,924,548 + +2.0 2,924,565 + +1.6 2,924,603 + -0.4 2,924,625 - -2.9 2,924,627 + -1.1 2,924,628 - +1.0 2,925,619 - +0.8 2,925,636 - -0.3 2,925,638 - +0.8 2,925,800 - Echvi_2466 0.15 -1.9 2,925,800 - Echvi_2466 0.15 -0.1 2,925,803 - Echvi_2466 0.15 -0.7 2,925,822 - Echvi_2466 0.19 +0.6 2,925,935 - Echvi_2466 0.38 -1.9 2,926,064 - Echvi_2466 0.59 -0.0 2,926,093 - Echvi_2466 0.64 +2.3 2,926,175 - Echvi_2466 0.78 -1.7 2,926,297 - +0.6
Or see this region's nucleotide sequence