Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0691 and Echvi_0692 are separated by 228 nucleotides Echvi_0692 and Echvi_0693 are separated by 288 nucleotides Echvi_0693 and Echvi_0694 are separated by 203 nucleotides
Echvi_0691: Echvi_0691 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 779,393 to 781,570
_0691
Echvi_0692: Echvi_0692 - hypothetical protein, at 781,799 to 782,032
_0692
Echvi_0693: Echvi_0693 - D-alanine--D-alanine ligase, at 782,321 to 783,310
_0693
Echvi_0694: Echvi_0694 - S-adenosylmethionine synthetase, at 783,514 to 784,767
_0694
Position (kb) 782
783
784 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 781.407 kb on + strand at 781.408 kb on - strand at 781.408 kb on - strand at 781.411 kb on - strand at 781.411 kb on - strand at 781.484 kb on + strand at 781.484 kb on + strand at 781.484 kb on + strand at 781.485 kb on - strand at 781.485 kb on - strand at 781.509 kb on + strand at 781.510 kb on - strand at 781.525 kb on + strand at 781.525 kb on + strand at 781.526 kb on - strand at 781.526 kb on - strand at 781.574 kb on + strand at 781.574 kb on + strand at 781.575 kb on - strand at 781.578 kb on + strand at 781.579 kb on - strand at 781.579 kb on - strand at 781.580 kb on + strand at 781.580 kb on + strand at 781.581 kb on - strand at 781.581 kb on - strand at 781.581 kb on - strand at 781.608 kb on + strand at 781.608 kb on + strand at 781.608 kb on + strand at 781.657 kb on - strand at 781.710 kb on + strand at 781.779 kb on + strand at 781.792 kb on + strand at 781.846 kb on - strand, within Echvi_0692 at 781.960 kb on + strand, within Echvi_0692 at 781.966 kb on - strand, within Echvi_0692 at 781.987 kb on + strand, within Echvi_0692 at 782.005 kb on - strand, within Echvi_0692 at 782.023 kb on - strand at 782.048 kb on - strand at 782.055 kb on - strand at 782.055 kb on - strand at 782.057 kb on + strand at 782.128 kb on + strand at 782.129 kb on - strand at 782.129 kb on - strand at 782.135 kb on - strand at 782.177 kb on + strand at 782.177 kb on + strand at 782.177 kb on + strand at 782.178 kb on - strand at 782.262 kb on - strand at 782.309 kb on + strand at 783.344 kb on - strand at 783.393 kb on + strand at 783.394 kb on - strand at 783.414 kb on + strand at 783.499 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 781,407 + -1.7 781,408 - -1.4 781,408 - -1.9 781,411 - -0.2 781,411 - +0.3 781,484 + +0.2 781,484 + -3.9 781,484 + +0.1 781,485 - +0.2 781,485 - +0.7 781,509 + -3.5 781,510 - -1.2 781,525 + -2.7 781,525 + +1.4 781,526 - -3.0 781,526 - -2.8 781,574 + -2.0 781,574 + -3.2 781,575 - -1.1 781,578 + -1.4 781,579 - -2.0 781,579 - -0.4 781,580 + -0.4 781,580 + -3.7 781,581 - +2.3 781,581 - -2.2 781,581 - -1.4 781,608 + +0.3 781,608 + -1.2 781,608 + -2.0 781,657 - +0.8 781,710 + +0.8 781,779 + +0.9 781,792 + -1.5 781,846 - Echvi_0692 0.20 +1.3 781,960 + Echvi_0692 0.69 -1.7 781,966 - Echvi_0692 0.71 -0.6 781,987 + Echvi_0692 0.80 -0.7 782,005 - Echvi_0692 0.88 -2.3 782,023 - -1.4 782,048 - -2.7 782,055 - +1.4 782,055 - -2.6 782,057 + -0.4 782,128 + -2.0 782,129 - +0.1 782,129 - +0.5 782,135 - +0.3 782,177 + +0.6 782,177 + +1.1 782,177 + -0.0 782,178 - +2.1 782,262 - +2.2 782,309 + -1.4 783,344 - -0.5 783,393 + -0.3 783,394 - -2.4 783,414 + +1.0 783,499 + -0.4
Or see this region's nucleotide sequence