Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0175 and Echvi_0176 are separated by 29 nucleotides Echvi_0176 and Echvi_0177 overlap by 4 nucleotides
Echvi_0175: Echvi_0175 - hypothetical protein, at 186,056 to 191,896
_0175
Echvi_0176: Echvi_0176 - conserved repeat domain, at 191,926 to 193,527
_0176
Echvi_0177: Echvi_0177 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 193,524 to 195,848
_0177
Position (kb) 191
192
193
194 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.199 kb on + strand, within Echvi_0175 at 191.205 kb on + strand, within Echvi_0175 at 191.252 kb on + strand, within Echvi_0175 at 191.273 kb on + strand, within Echvi_0175 at 191.296 kb on + strand, within Echvi_0175 at 191.297 kb on - strand, within Echvi_0175 at 191.298 kb on + strand, within Echvi_0175 at 191.298 kb on + strand, within Echvi_0175 at 191.299 kb on - strand, within Echvi_0175 at 191.302 kb on + strand, within Echvi_0175 at 191.302 kb on + strand, within Echvi_0175 at 191.302 kb on + strand, within Echvi_0175 at 191.309 kb on - strand, within Echvi_0175 at 191.319 kb on + strand at 191.320 kb on - strand at 191.322 kb on + strand at 191.323 kb on - strand at 191.324 kb on + strand at 191.325 kb on - strand at 191.342 kb on - strand at 191.342 kb on - strand at 191.350 kb on + strand at 191.354 kb on + strand at 191.354 kb on + strand at 191.386 kb on + strand at 191.396 kb on - strand at 191.409 kb on - strand at 191.420 kb on + strand at 191.421 kb on - strand at 191.457 kb on + strand at 191.458 kb on - strand at 191.458 kb on - strand at 191.461 kb on + strand at 191.461 kb on + strand at 191.461 kb on + strand at 191.461 kb on + strand at 191.462 kb on - strand at 191.462 kb on - strand at 191.462 kb on - strand at 191.462 kb on - strand at 191.510 kb on + strand at 191.511 kb on - strand at 191.527 kb on + strand at 191.531 kb on + strand at 191.532 kb on - strand at 191.554 kb on + strand at 191.554 kb on + strand at 191.554 kb on + strand at 191.554 kb on + strand at 191.555 kb on - strand at 191.559 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.583 kb on + strand at 191.584 kb on - strand at 191.584 kb on - strand at 191.584 kb on - strand at 191.586 kb on - strand at 191.586 kb on - strand at 191.586 kb on - strand at 191.586 kb on - strand at 191.587 kb on - strand at 191.599 kb on + strand at 191.599 kb on + strand at 191.599 kb on + strand at 191.600 kb on - strand at 191.600 kb on - strand at 191.640 kb on + strand at 191.641 kb on - strand at 191.641 kb on - strand at 191.650 kb on - strand at 191.652 kb on + strand at 191.652 kb on + strand at 191.653 kb on - strand at 191.665 kb on + strand at 191.666 kb on - strand at 191.666 kb on - strand at 191.674 kb on + strand at 191.675 kb on - strand at 191.675 kb on - strand at 191.675 kb on - strand at 191.675 kb on - strand at 191.683 kb on + strand at 191.683 kb on + strand at 191.684 kb on - strand at 191.684 kb on - strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.686 kb on + strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.687 kb on - strand at 191.688 kb on + strand at 191.688 kb on + strand at 191.688 kb on + strand at 191.688 kb on + strand at 191.689 kb on - strand at 191.689 kb on - strand at 191.689 kb on - strand at 191.693 kb on + strand at 191.720 kb on + strand at 191.720 kb on + strand at 191.721 kb on - strand at 191.740 kb on + strand at 191.834 kb on + strand at 191.834 kb on + strand at 191.903 kb on - strand at 191.931 kb on + strand at 191.931 kb on + strand at 192.005 kb on - strand at 192.017 kb on + strand at 192.018 kb on - strand at 192.018 kb on - strand at 192.024 kb on - strand at 192.027 kb on + strand at 192.034 kb on + strand at 192.037 kb on + strand at 192.065 kb on + strand at 192.082 kb on + strand at 192.083 kb on - strand at 192.184 kb on - strand, within Echvi_0176 at 192.184 kb on - strand, within Echvi_0176 at 192.192 kb on + strand, within Echvi_0176 at 192.217 kb on - strand, within Echvi_0176 at 192.217 kb on - strand, within Echvi_0176 at 192.219 kb on + strand, within Echvi_0176 at 192.246 kb on + strand, within Echvi_0176 at 192.247 kb on - strand, within Echvi_0176 at 192.270 kb on + strand, within Echvi_0176 at 192.289 kb on + strand, within Echvi_0176 at 192.290 kb on - strand, within Echvi_0176 at 192.385 kb on + strand, within Echvi_0176 at 192.399 kb on - strand, within Echvi_0176 at 192.424 kb on - strand, within Echvi_0176 at 192.483 kb on + strand, within Echvi_0176 at 192.649 kb on + strand, within Echvi_0176 at 192.661 kb on + strand, within Echvi_0176 at 192.814 kb on + strand, within Echvi_0176 at 192.814 kb on + strand, within Echvi_0176 at 192.823 kb on + strand, within Echvi_0176 at 192.833 kb on + strand, within Echvi_0176 at 192.858 kb on + strand, within Echvi_0176 at 192.858 kb on + strand, within Echvi_0176 at 192.870 kb on + strand, within Echvi_0176 at 192.918 kb on + strand, within Echvi_0176 at 192.919 kb on - strand, within Echvi_0176 at 192.923 kb on + strand, within Echvi_0176 at 192.971 kb on + strand, within Echvi_0176 at 192.971 kb on + strand, within Echvi_0176 at 192.994 kb on + strand, within Echvi_0176 at 192.996 kb on + strand, within Echvi_0176 at 192.997 kb on - strand, within Echvi_0176 at 193.005 kb on + strand, within Echvi_0176 at 193.005 kb on + strand, within Echvi_0176 at 193.006 kb on - strand, within Echvi_0176 at 193.006 kb on - strand, within Echvi_0176 at 193.008 kb on + strand, within Echvi_0176 at 193.027 kb on + strand, within Echvi_0176 at 193.045 kb on - strand, within Echvi_0176 at 193.063 kb on + strand, within Echvi_0176 at 193.064 kb on - strand, within Echvi_0176 at 193.112 kb on - strand, within Echvi_0176 at 193.125 kb on + strand, within Echvi_0176 at 193.150 kb on + strand, within Echvi_0176 at 193.150 kb on + strand, within Echvi_0176 at 193.150 kb on + strand, within Echvi_0176 at 193.151 kb on - strand, within Echvi_0176 at 193.151 kb on - strand, within Echvi_0176 at 193.188 kb on + strand, within Echvi_0176 at 193.188 kb on + strand, within Echvi_0176 at 193.189 kb on - strand, within Echvi_0176 at 193.189 kb on - strand, within Echvi_0176 at 193.191 kb on + strand, within Echvi_0176 at 193.209 kb on + strand, within Echvi_0176 at 193.209 kb on + strand, within Echvi_0176 at 193.210 kb on - strand, within Echvi_0176 at 193.210 kb on - strand, within Echvi_0176 at 193.295 kb on + strand, within Echvi_0176 at 193.335 kb on - strand, within Echvi_0176 at 193.352 kb on - strand, within Echvi_0176 at 193.352 kb on - strand, within Echvi_0176 at 193.404 kb on + strand at 193.504 kb on + strand at 193.505 kb on - strand at 193.515 kb on + strand at 193.515 kb on + strand at 193.517 kb on + strand at 193.517 kb on + strand at 193.517 kb on + strand at 193.518 kb on - strand at 193.518 kb on - strand at 193.518 kb on - strand at 193.522 kb on + strand at 193.542 kb on + strand at 193.543 kb on - strand at 193.638 kb on - strand at 193.666 kb on + strand at 193.667 kb on - strand at 193.667 kb on - strand at 193.707 kb on - strand at 193.791 kb on + strand, within Echvi_0177 at 193.791 kb on + strand, within Echvi_0177 at 193.792 kb on - strand, within Echvi_0177 at 193.860 kb on + strand, within Echvi_0177 at 193.860 kb on + strand, within Echvi_0177 at 193.860 kb on + strand, within Echvi_0177 at 193.861 kb on - strand, within Echvi_0177 at 193.882 kb on + strand, within Echvi_0177 at 194.071 kb on + strand, within Echvi_0177 at 194.071 kb on + strand, within Echvi_0177 at 194.117 kb on - strand, within Echvi_0177 at 194.117 kb on - strand, within Echvi_0177 at 194.178 kb on + strand, within Echvi_0177 at 194.178 kb on + strand, within Echvi_0177 at 194.251 kb on + strand, within Echvi_0177 at 194.251 kb on + strand, within Echvi_0177 at 194.251 kb on + strand, within Echvi_0177 at 194.368 kb on + strand, within Echvi_0177 at 194.444 kb on + strand, within Echvi_0177 at 194.445 kb on - strand, within Echvi_0177 at 194.454 kb on + strand, within Echvi_0177 at 194.455 kb on - strand, within Echvi_0177 at 194.513 kb on + strand, within Echvi_0177 at 194.514 kb on - strand, within Echvi_0177
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 191,199 + Echvi_0175 0.88 +1.5 191,199 + Echvi_0175 0.88 -0.2 191,199 + Echvi_0175 0.88 +0.2 191,199 + Echvi_0175 0.88 +0.1 191,199 + Echvi_0175 0.88 +0.4 191,199 + Echvi_0175 0.88 +0.9 191,205 + Echvi_0175 0.88 -0.2 191,252 + Echvi_0175 0.89 +0.5 191,273 + Echvi_0175 0.89 +0.3 191,296 + Echvi_0175 0.90 +0.3 191,297 - Echvi_0175 0.90 +1.2 191,298 + Echvi_0175 0.90 +1.5 191,298 + Echvi_0175 0.90 +1.1 191,299 - Echvi_0175 0.90 -1.7 191,302 + Echvi_0175 0.90 -0.6 191,302 + Echvi_0175 0.90 -0.6 191,302 + Echvi_0175 0.90 -0.6 191,309 - Echvi_0175 0.90 -3.0 191,319 + +0.8 191,320 - -0.1 191,322 + +0.3 191,323 - -2.1 191,324 + -0.5 191,325 - -1.2 191,342 - -0.8 191,342 - -2.6 191,350 + +1.4 191,354 + -1.4 191,354 + +1.1 191,386 + +0.3 191,396 - -2.0 191,409 - +0.8 191,420 + +0.6 191,421 - -0.2 191,457 + +0.8 191,458 - -1.9 191,458 - -1.8 191,461 + +0.6 191,461 + +1.4 191,461 + -0.3 191,461 + +2.1 191,462 - +2.6 191,462 - -2.4 191,462 - -0.8 191,462 - -0.5 191,510 + -2.4 191,511 - +0.1 191,527 + -0.4 191,531 + -0.7 191,532 - +1.3 191,554 + +2.0 191,554 + +2.7 191,554 + +1.3 191,554 + +1.2 191,555 - +0.5 191,559 + -0.3 191,583 + +1.6 191,583 + -1.0 191,583 + -0.0 191,583 + +0.2 191,583 + +0.1 191,583 + -1.2 191,584 - +0.8 191,584 - -1.2 191,584 - +1.7 191,586 - -0.4 191,586 - -1.6 191,586 - -1.1 191,586 - +1.0 191,587 - -0.6 191,599 + -0.9 191,599 + -0.6 191,599 + -0.1 191,600 - -1.0 191,600 - +0.2 191,640 + -1.1 191,641 - -0.7 191,641 - +4.2 191,650 - -0.6 191,652 + +0.9 191,652 + +1.2 191,653 - +0.7 191,665 + +0.4 191,666 - +0.4 191,666 - +0.2 191,674 + +0.7 191,675 - +1.5 191,675 - -0.9 191,675 - -0.8 191,675 - -1.3 191,683 + -1.9 191,683 + +0.6 191,684 - +1.6 191,684 - -1.7 191,686 + -0.5 191,686 + +0.9 191,686 + +0.6 191,686 + +0.6 191,686 + +0.6 191,686 + -0.6 191,686 + +3.1 191,687 - -0.5 191,687 - -0.8 191,687 - -2.0 191,687 - -0.8 191,687 - -1.7 191,687 - +0.9 191,688 + +1.1 191,688 + -2.4 191,688 + -0.1 191,688 + -0.5 191,689 - +0.4 191,689 - -0.6 191,689 - +0.7 191,693 + +0.3 191,720 + +0.7 191,720 + +1.4 191,721 - +1.0 191,740 + +0.9 191,834 + -0.3 191,834 + +1.4 191,903 - +2.0 191,931 + +0.8 191,931 + +0.4 192,005 - +2.2 192,017 + -2.4 192,018 - -2.2 192,018 - -0.9 192,024 - +0.2 192,027 + -0.4 192,034 + -0.1 192,037 + -3.2 192,065 + +0.4 192,082 + -0.1 192,083 - -1.8 192,184 - Echvi_0176 0.16 -1.3 192,184 - Echvi_0176 0.16 +1.5 192,192 + Echvi_0176 0.17 +0.5 192,217 - Echvi_0176 0.18 -1.9 192,217 - Echvi_0176 0.18 -0.6 192,219 + Echvi_0176 0.18 +0.5 192,246 + Echvi_0176 0.20 +1.9 192,247 - Echvi_0176 0.20 -1.4 192,270 + Echvi_0176 0.21 -2.8 192,289 + Echvi_0176 0.23 -2.3 192,290 - Echvi_0176 0.23 -0.1 192,385 + Echvi_0176 0.29 +0.3 192,399 - Echvi_0176 0.30 -0.4 192,424 - Echvi_0176 0.31 -1.9 192,483 + Echvi_0176 0.35 -0.6 192,649 + Echvi_0176 0.45 +2.6 192,661 + Echvi_0176 0.46 -2.2 192,814 + Echvi_0176 0.55 +0.3 192,814 + Echvi_0176 0.55 -2.2 192,823 + Echvi_0176 0.56 -3.1 192,833 + Echvi_0176 0.57 -0.1 192,858 + Echvi_0176 0.58 -0.8 192,858 + Echvi_0176 0.58 +1.9 192,870 + Echvi_0176 0.59 -0.0 192,918 + Echvi_0176 0.62 +1.6 192,919 - Echvi_0176 0.62 +1.2 192,923 + Echvi_0176 0.62 +1.1 192,971 + Echvi_0176 0.65 +0.4 192,971 + Echvi_0176 0.65 +0.7 192,994 + Echvi_0176 0.67 +0.5 192,996 + Echvi_0176 0.67 -1.4 192,997 - Echvi_0176 0.67 -1.2 193,005 + Echvi_0176 0.67 +1.0 193,005 + Echvi_0176 0.67 +2.1 193,006 - Echvi_0176 0.67 -1.3 193,006 - Echvi_0176 0.67 +0.1 193,008 + Echvi_0176 0.68 -1.2 193,027 + Echvi_0176 0.69 +0.5 193,045 - Echvi_0176 0.70 +0.7 193,063 + Echvi_0176 0.71 -1.8 193,064 - Echvi_0176 0.71 +0.2 193,112 - Echvi_0176 0.74 -0.3 193,125 + Echvi_0176 0.75 -0.2 193,150 + Echvi_0176 0.76 +1.3 193,150 + Echvi_0176 0.76 -0.7 193,150 + Echvi_0176 0.76 -0.8 193,151 - Echvi_0176 0.76 +0.2 193,151 - Echvi_0176 0.76 -1.2 193,188 + Echvi_0176 0.79 +0.2 193,188 + Echvi_0176 0.79 +1.4 193,189 - Echvi_0176 0.79 -0.1 193,189 - Echvi_0176 0.79 -0.8 193,191 + Echvi_0176 0.79 +1.9 193,209 + Echvi_0176 0.80 +0.6 193,209 + Echvi_0176 0.80 +1.8 193,210 - Echvi_0176 0.80 -0.8 193,210 - Echvi_0176 0.80 +0.6 193,295 + Echvi_0176 0.85 +0.5 193,335 - Echvi_0176 0.88 -2.4 193,352 - Echvi_0176 0.89 -0.1 193,352 - Echvi_0176 0.89 +0.8 193,404 + +1.3 193,504 + -0.6 193,505 - -0.4 193,515 + -1.2 193,515 + +1.8 193,517 + +0.9 193,517 + -0.0 193,517 + +0.6 193,518 - +1.9 193,518 - -2.9 193,518 - +0.8 193,522 + +0.4 193,542 + -0.6 193,543 - -0.6 193,638 - -3.6 193,666 + +0.8 193,667 - -1.6 193,667 - -1.6 193,707 - -0.8 193,791 + Echvi_0177 0.11 -0.1 193,791 + Echvi_0177 0.11 +1.2 193,792 - Echvi_0177 0.12 -2.7 193,860 + Echvi_0177 0.14 +2.4 193,860 + Echvi_0177 0.14 +1.6 193,860 + Echvi_0177 0.14 +1.3 193,861 - Echvi_0177 0.14 +2.1 193,882 + Echvi_0177 0.15 -1.4 194,071 + Echvi_0177 0.24 +0.5 194,071 + Echvi_0177 0.24 +0.6 194,117 - Echvi_0177 0.26 -1.1 194,117 - Echvi_0177 0.26 +1.6 194,178 + Echvi_0177 0.28 +1.0 194,178 + Echvi_0177 0.28 -0.8 194,251 + Echvi_0177 0.31 -1.9 194,251 + Echvi_0177 0.31 -1.7 194,251 + Echvi_0177 0.31 +0.1 194,368 + Echvi_0177 0.36 +0.2 194,444 + Echvi_0177 0.40 -0.2 194,445 - Echvi_0177 0.40 -0.6 194,454 + Echvi_0177 0.40 +1.1 194,455 - Echvi_0177 0.40 -3.3 194,513 + Echvi_0177 0.43 +0.6 194,514 - Echvi_0177 0.43 -1.6
Or see this region's nucleotide sequence