Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2313

Experiment: m.b. syringaldehyde 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2312 and B158DRAFT_2313 are separated by 15 nucleotidesB158DRAFT_2313 and B158DRAFT_2314 are separated by 19 nucleotidesB158DRAFT_2314 and B158DRAFT_2315 are separated by 105 nucleotides B158DRAFT_2312: B158DRAFT_2312 - polyphosphate kinase 1, at 472,258 to 474,393 _2312 B158DRAFT_2313: B158DRAFT_2313 - Exopolyphosphatase, at 474,409 to 475,956 _2313 B158DRAFT_2314: B158DRAFT_2314 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 475,976 to 476,725 _2314 B158DRAFT_2315: B158DRAFT_2315 - proteobacterial dedicated sortase system response regulator, at 476,831 to 477,523 _2315 Position (kb) 474 475 476Strain fitness (log2 ratio) -2 -1 0 1at 473.438 kb on + strand, within B158DRAFT_2312at 473.469 kb on + strand, within B158DRAFT_2312at 473.510 kb on - strand, within B158DRAFT_2312at 473.535 kb on + strand, within B158DRAFT_2312at 473.701 kb on + strand, within B158DRAFT_2312at 473.708 kb on - strand, within B158DRAFT_2312at 473.710 kb on + strand, within B158DRAFT_2312at 473.718 kb on - strand, within B158DRAFT_2312at 473.718 kb on - strand, within B158DRAFT_2312at 473.748 kb on + strand, within B158DRAFT_2312at 473.748 kb on + strand, within B158DRAFT_2312at 473.748 kb on + strand, within B158DRAFT_2312at 473.748 kb on + strand, within B158DRAFT_2312at 473.756 kb on - strand, within B158DRAFT_2312at 473.756 kb on - strand, within B158DRAFT_2312at 473.756 kb on - strand, within B158DRAFT_2312at 473.972 kb on - strand, within B158DRAFT_2312at 473.992 kb on + strand, within B158DRAFT_2312at 473.992 kb on + strand, within B158DRAFT_2312at 473.992 kb on + strand, within B158DRAFT_2312at 473.992 kb on + strand, within B158DRAFT_2312at 473.992 kb on + strand, within B158DRAFT_2312at 473.992 kb on + strand, within B158DRAFT_2312at 474.000 kb on - strand, within B158DRAFT_2312at 474.000 kb on - strand, within B158DRAFT_2312at 474.000 kb on - strand, within B158DRAFT_2312at 474.005 kb on - strand, within B158DRAFT_2312at 474.086 kb on + strand, within B158DRAFT_2312at 474.116 kb on + strand, within B158DRAFT_2312at 474.204 kb on + strandat 474.232 kb on + strandat 474.237 kb on + strandat 474.294 kb on + strandat 474.386 kb on - strandat 474.390 kb on - strandat 474.409 kb on + strandat 474.454 kb on + strandat 474.671 kb on + strand, within B158DRAFT_2313at 474.671 kb on + strand, within B158DRAFT_2313at 474.671 kb on + strand, within B158DRAFT_2313at 474.671 kb on + strand, within B158DRAFT_2313at 474.679 kb on - strand, within B158DRAFT_2313at 474.679 kb on - strand, within B158DRAFT_2313at 474.679 kb on - strand, within B158DRAFT_2313at 474.744 kb on - strand, within B158DRAFT_2313at 474.749 kb on - strand, within B158DRAFT_2313at 474.772 kb on + strand, within B158DRAFT_2313at 474.780 kb on - strand, within B158DRAFT_2313at 474.780 kb on - strand, within B158DRAFT_2313at 474.780 kb on - strand, within B158DRAFT_2313at 474.780 kb on - strand, within B158DRAFT_2313at 474.791 kb on - strand, within B158DRAFT_2313at 474.908 kb on + strand, within B158DRAFT_2313at 474.916 kb on - strand, within B158DRAFT_2313at 474.923 kb on + strand, within B158DRAFT_2313at 474.961 kb on - strand, within B158DRAFT_2313at 474.963 kb on + strand, within B158DRAFT_2313at 474.963 kb on + strand, within B158DRAFT_2313at 474.971 kb on - strand, within B158DRAFT_2313at 474.976 kb on - strand, within B158DRAFT_2313at 474.997 kb on - strand, within B158DRAFT_2313at 475.025 kb on - strand, within B158DRAFT_2313at 475.054 kb on - strand, within B158DRAFT_2313at 475.093 kb on + strand, within B158DRAFT_2313at 475.210 kb on + strand, within B158DRAFT_2313at 475.210 kb on + strand, within B158DRAFT_2313at 475.217 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.218 kb on - strand, within B158DRAFT_2313at 475.224 kb on - strand, within B158DRAFT_2313at 475.236 kb on - strand, within B158DRAFT_2313at 475.238 kb on + strand, within B158DRAFT_2313at 475.283 kb on - strand, within B158DRAFT_2313at 475.283 kb on - strand, within B158DRAFT_2313at 475.297 kb on + strand, within B158DRAFT_2313at 475.305 kb on - strand, within B158DRAFT_2313at 475.305 kb on - strand, within B158DRAFT_2313at 475.305 kb on - strand, within B158DRAFT_2313at 475.429 kb on + strand, within B158DRAFT_2313at 475.450 kb on - strand, within B158DRAFT_2313at 475.513 kb on - strand, within B158DRAFT_2313at 475.535 kb on + strand, within B158DRAFT_2313at 475.535 kb on - strand, within B158DRAFT_2313at 475.597 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.644 kb on + strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.652 kb on - strand, within B158DRAFT_2313at 475.769 kb on + strand, within B158DRAFT_2313at 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on + strandat 475.809 kb on - strandat 475.817 kb on - strandat 475.853 kb on - strandat 475.889 kb on + strandat 475.889 kb on + strandat 475.897 kb on - strandat 475.897 kb on - strandat 475.907 kb on + strandat 475.907 kb on - strandat 475.915 kb on - strandat 475.915 kb on - strandat 475.998 kb on + strandat 476.013 kb on + strandat 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.082 kb on + strand, within B158DRAFT_2314at 476.090 kb on + strand, within B158DRAFT_2314at 476.090 kb on + strand, within B158DRAFT_2314at 476.090 kb on + strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.090 kb on - strand, within B158DRAFT_2314at 476.098 kb on - strand, within B158DRAFT_2314at 476.169 kb on - strand, within B158DRAFT_2314at 476.177 kb on - strand, within B158DRAFT_2314at 476.192 kb on - strand, within B158DRAFT_2314at 476.216 kb on + strand, within B158DRAFT_2314at 476.224 kb on - strand, within B158DRAFT_2314at 476.224 kb on - strand, within B158DRAFT_2314at 476.224 kb on - strand, within B158DRAFT_2314at 476.349 kb on + strand, within B158DRAFT_2314at 476.357 kb on - strand, within B158DRAFT_2314at 476.357 kb on - strand, within B158DRAFT_2314at 476.357 kb on - strand, within B158DRAFT_2314at 476.429 kb on + strand, within B158DRAFT_2314at 476.437 kb on - strand, within B158DRAFT_2314at 476.439 kb on + strand, within B158DRAFT_2314at 476.505 kb on - strand, within B158DRAFT_2314at 476.644 kb on - strand, within B158DRAFT_2314at 476.755 kb on - strandat 476.806 kb on - strandat 476.819 kb on + strandat 476.913 kb on + strand, within B158DRAFT_2315at 476.928 kb on - strand, within B158DRAFT_2315at 476.951 kb on + strand, within B158DRAFT_2315

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 2 mM
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473,438 + B158DRAFT_2312 0.55 -0.1
473,469 + B158DRAFT_2312 0.57 -0.3
473,510 - B158DRAFT_2312 0.59 -0.0
473,535 + B158DRAFT_2312 0.60 -0.7
473,701 + B158DRAFT_2312 0.68 -0.2
473,708 - B158DRAFT_2312 0.68 -0.1
473,710 + B158DRAFT_2312 0.68 -0.6
473,718 - B158DRAFT_2312 0.68 -0.4
473,718 - B158DRAFT_2312 0.68 +0.1
473,748 + B158DRAFT_2312 0.70 -0.2
473,748 + B158DRAFT_2312 0.70 +0.0
473,748 + B158DRAFT_2312 0.70 -0.6
473,748 + B158DRAFT_2312 0.70 -0.2
473,756 - B158DRAFT_2312 0.70 -0.0
473,756 - B158DRAFT_2312 0.70 -0.7
473,756 - B158DRAFT_2312 0.70 +0.4
473,972 - B158DRAFT_2312 0.80 -0.6
473,992 + B158DRAFT_2312 0.81 -0.4
473,992 + B158DRAFT_2312 0.81 -0.1
473,992 + B158DRAFT_2312 0.81 -0.4
473,992 + B158DRAFT_2312 0.81 +0.7
473,992 + B158DRAFT_2312 0.81 -0.1
473,992 + B158DRAFT_2312 0.81 -0.3
474,000 - B158DRAFT_2312 0.82 -0.2
474,000 - B158DRAFT_2312 0.82 -0.1
474,000 - B158DRAFT_2312 0.82 +0.2
474,005 - B158DRAFT_2312 0.82 -0.0
474,086 + B158DRAFT_2312 0.86 -0.1
474,116 + B158DRAFT_2312 0.87 -0.5
474,204 + -0.5
474,232 + +0.5
474,237 + +0.3
474,294 + -0.6
474,386 - -0.3
474,390 - -0.2
474,409 + -0.2
474,454 + -0.4
474,671 + B158DRAFT_2313 0.17 -0.3
474,671 + B158DRAFT_2313 0.17 -0.3
474,671 + B158DRAFT_2313 0.17 -0.2
474,671 + B158DRAFT_2313 0.17 +0.0
474,679 - B158DRAFT_2313 0.17 +0.2
474,679 - B158DRAFT_2313 0.17 +0.2
474,679 - B158DRAFT_2313 0.17 -0.1
474,744 - B158DRAFT_2313 0.22 -0.3
474,749 - B158DRAFT_2313 0.22 -0.5
474,772 + B158DRAFT_2313 0.23 -0.0
474,780 - B158DRAFT_2313 0.24 +0.1
474,780 - B158DRAFT_2313 0.24 -0.7
474,780 - B158DRAFT_2313 0.24 +0.1
474,780 - B158DRAFT_2313 0.24 -0.2
474,791 - B158DRAFT_2313 0.25 -0.1
474,908 + B158DRAFT_2313 0.32 +0.0
474,916 - B158DRAFT_2313 0.33 -0.3
474,923 + B158DRAFT_2313 0.33 -0.3
474,961 - B158DRAFT_2313 0.36 -0.0
474,963 + B158DRAFT_2313 0.36 -0.3
474,963 + B158DRAFT_2313 0.36 -0.1
474,971 - B158DRAFT_2313 0.36 -0.3
474,976 - B158DRAFT_2313 0.37 +0.1
474,997 - B158DRAFT_2313 0.38 -0.2
475,025 - B158DRAFT_2313 0.40 -0.3
475,054 - B158DRAFT_2313 0.42 -0.4
475,093 + B158DRAFT_2313 0.44 +0.3
475,210 + B158DRAFT_2313 0.52 -0.3
475,210 + B158DRAFT_2313 0.52 -0.6
475,217 - B158DRAFT_2313 0.52 -0.4
475,218 - B158DRAFT_2313 0.52 -0.1
475,218 - B158DRAFT_2313 0.52 +0.1
475,218 - B158DRAFT_2313 0.52 -0.2
475,218 - B158DRAFT_2313 0.52 -0.4
475,218 - B158DRAFT_2313 0.52 +0.7
475,224 - B158DRAFT_2313 0.53 -0.0
475,236 - B158DRAFT_2313 0.53 -0.2
475,238 + B158DRAFT_2313 0.54 -0.2
475,283 - B158DRAFT_2313 0.56 -0.1
475,283 - B158DRAFT_2313 0.56 -0.3
475,297 + B158DRAFT_2313 0.57 -0.1
475,305 - B158DRAFT_2313 0.58 -0.3
475,305 - B158DRAFT_2313 0.58 +0.5
475,305 - B158DRAFT_2313 0.58 -0.2
475,429 + B158DRAFT_2313 0.66 -0.2
475,450 - B158DRAFT_2313 0.67 +0.2
475,513 - B158DRAFT_2313 0.71 -0.0
475,535 + B158DRAFT_2313 0.73 -0.4
475,535 - B158DRAFT_2313 0.73 -0.1
475,597 + B158DRAFT_2313 0.77 -0.3
475,644 + B158DRAFT_2313 0.80 -0.1
475,644 + B158DRAFT_2313 0.80 +0.7
475,644 + B158DRAFT_2313 0.80 +0.0
475,644 + B158DRAFT_2313 0.80 -0.6
475,644 + B158DRAFT_2313 0.80 -0.1
475,644 + B158DRAFT_2313 0.80 -0.0
475,644 + B158DRAFT_2313 0.80 +0.3
475,644 + B158DRAFT_2313 0.80 +0.1
475,644 + B158DRAFT_2313 0.80 -0.8
475,644 + B158DRAFT_2313 0.80 -0.1
475,644 + B158DRAFT_2313 0.80 -0.2
475,644 + B158DRAFT_2313 0.80 -0.1
475,644 + B158DRAFT_2313 0.80 -0.2
475,644 + B158DRAFT_2313 0.80 +0.1
475,644 + B158DRAFT_2313 0.80 -0.2
475,644 + B158DRAFT_2313 0.80 -0.6
475,644 + B158DRAFT_2313 0.80 +0.6
475,644 + B158DRAFT_2313 0.80 -0.0
475,644 + B158DRAFT_2313 0.80 -0.3
475,644 + B158DRAFT_2313 0.80 -0.3
475,644 + B158DRAFT_2313 0.80 -0.2
475,644 + B158DRAFT_2313 0.80 +0.4
475,644 + B158DRAFT_2313 0.80 +0.3
475,652 - B158DRAFT_2313 0.80 +0.1
475,652 - B158DRAFT_2313 0.80 -0.3
475,652 - B158DRAFT_2313 0.80 -0.3
475,652 - B158DRAFT_2313 0.80 -0.1
475,652 - B158DRAFT_2313 0.80 -0.3
475,652 - B158DRAFT_2313 0.80 -0.4
475,652 - B158DRAFT_2313 0.80 -0.2
475,652 - B158DRAFT_2313 0.80 -0.6
475,652 - B158DRAFT_2313 0.80 +0.1
475,652 - B158DRAFT_2313 0.80 -0.0
475,652 - B158DRAFT_2313 0.80 -0.4
475,652 - B158DRAFT_2313 0.80 -1.3
475,652 - B158DRAFT_2313 0.80 -0.2
475,652 - B158DRAFT_2313 0.80 +0.2
475,652 - B158DRAFT_2313 0.80 -0.2
475,652 - B158DRAFT_2313 0.80 -0.3
475,652 - B158DRAFT_2313 0.80 +0.1
475,652 - B158DRAFT_2313 0.80 -0.2
475,652 - B158DRAFT_2313 0.80 +0.3
475,652 - B158DRAFT_2313 0.80 -0.1
475,652 - B158DRAFT_2313 0.80 +0.0
475,769 + B158DRAFT_2313 0.88 +0.1
475,809 + -0.3
475,809 + -0.3
475,809 + -0.0
475,809 + -0.3
475,809 + +0.2
475,809 - +0.1
475,817 - +0.4
475,853 - +0.2
475,889 + -0.2
475,889 + -0.3
475,897 - -0.1
475,897 - -0.3
475,907 + +0.0
475,907 - -0.1
475,915 - -0.2
475,915 - -0.1
475,998 + -0.3
476,013 + -0.6
476,082 + B158DRAFT_2314 0.14 +0.4
476,082 + B158DRAFT_2314 0.14 +0.7
476,082 + B158DRAFT_2314 0.14 -0.0
476,082 + B158DRAFT_2314 0.14 -1.1
476,082 + B158DRAFT_2314 0.14 -0.6
476,082 + B158DRAFT_2314 0.14 -0.0
476,082 + B158DRAFT_2314 0.14 -0.1
476,090 + B158DRAFT_2314 0.15 +0.5
476,090 + B158DRAFT_2314 0.15 -1.2
476,090 + B158DRAFT_2314 0.15 -0.7
476,090 - B158DRAFT_2314 0.15 -0.5
476,090 - B158DRAFT_2314 0.15 -1.1
476,090 - B158DRAFT_2314 0.15 -0.4
476,090 - B158DRAFT_2314 0.15 -1.5
476,098 - B158DRAFT_2314 0.16 +0.6
476,169 - B158DRAFT_2314 0.26 -0.3
476,177 - B158DRAFT_2314 0.27 -0.8
476,192 - B158DRAFT_2314 0.29 -0.4
476,216 + B158DRAFT_2314 0.32 -1.8
476,224 - B158DRAFT_2314 0.33 -1.8
476,224 - B158DRAFT_2314 0.33 -0.4
476,224 - B158DRAFT_2314 0.33 -0.6
476,349 + B158DRAFT_2314 0.50 +0.0
476,357 - B158DRAFT_2314 0.51 +0.1
476,357 - B158DRAFT_2314 0.51 -0.8
476,357 - B158DRAFT_2314 0.51 +1.0
476,429 + B158DRAFT_2314 0.60 -1.1
476,437 - B158DRAFT_2314 0.61 -1.6
476,439 + B158DRAFT_2314 0.62 -0.7
476,505 - B158DRAFT_2314 0.71 -1.6
476,644 - B158DRAFT_2314 0.89 +0.5
476,755 - -1.5
476,806 - -1.7
476,819 + -0.3
476,913 + B158DRAFT_2315 0.12 -2.3
476,928 - B158DRAFT_2315 0.14 -1.2
476,951 + B158DRAFT_2315 0.17 -2.3

Or see this region's nucleotide sequence