Experiment: m.b. syringaldehyde 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2261 and B158DRAFT_2262 are separated by 37 nucleotides B158DRAFT_2262 and B158DRAFT_2263 are separated by 19 nucleotides B158DRAFT_2263 and B158DRAFT_2264 are separated by 54 nucleotides B158DRAFT_2264 and B158DRAFT_2265 are separated by 104 nucleotides
B158DRAFT_2261: B158DRAFT_2261 - ribosomal protein S16, at 425,594 to 425,839
_2261
B158DRAFT_2262: B158DRAFT_2262 - 16S rRNA processing protein RimM, at 425,877 to 426,398
_2262
B158DRAFT_2263: B158DRAFT_2263 - tRNA (guanine-N1)-methyltransferase, at 426,418 to 427,185
_2263
B158DRAFT_2264: B158DRAFT_2264 - ribosomal protein L19, bacterial type, at 427,240 to 427,596
_2264
B158DRAFT_2265: B158DRAFT_2265 - tyrosine recombinase XerD, at 427,701 to 428,588
_2265
Position (kb) 426
427
428 Strain fitness (log2 ratio) -2
-1
0
1 at 427.736 kb on + strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.744 kb on - strand at 427.754 kb on - strand at 427.759 kb on - strand at 427.759 kb on - strand at 427.989 kb on - strand, within B158DRAFT_2265 at 428.053 kb on - strand, within B158DRAFT_2265 at 428.082 kb on + strand, within B158DRAFT_2265 at 428.138 kb on - strand, within B158DRAFT_2265
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. syringaldehyde 2 mM remove 427,736 + -0.7 427,744 - -1.4 427,744 - -1.1 427,744 - -0.6 427,754 - -1.8 427,759 - -2.3 427,759 - -1.2 427,989 - B158DRAFT_2265 0.32 -0.6 428,053 - B158DRAFT_2265 0.40 -1.4 428,082 + B158DRAFT_2265 0.43 -0.5 428,138 - B158DRAFT_2265 0.49 -0.9
Or see this region's nucleotide sequence