Experiment: m.b. syringaldehyde 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1346 and B158DRAFT_1347 are separated by 43 nucleotides B158DRAFT_1347 and B158DRAFT_1348 are separated by 108 nucleotides
B158DRAFT_1346: B158DRAFT_1346 - 2-methylaconitate cis-trans isomerase, at 1,391,184 to 1,392,398
_1346
B158DRAFT_1347: B158DRAFT_1347 - hypothetical protein, at 1,392,442 to 1,393,545
_1347
B158DRAFT_1348: B158DRAFT_1348 - hypothetical protein, at 1,393,654 to 1,394,670
_1348
Position (kb)
1392
1393
1394 Strain fitness (log2 ratio)
-2
-1
0
1 at 1391.777 kb on + strand, within B158DRAFT_1346 at 1391.890 kb on + strand, within B158DRAFT_1346 at 1392.112 kb on + strand, within B158DRAFT_1346 at 1392.587 kb on - strand, within B158DRAFT_1347 at 1392.594 kb on + strand, within B158DRAFT_1347 at 1392.660 kb on - strand, within B158DRAFT_1347 at 1392.726 kb on + strand, within B158DRAFT_1347 at 1392.920 kb on + strand, within B158DRAFT_1347 at 1392.948 kb on - strand, within B158DRAFT_1347 at 1393.063 kb on - strand, within B158DRAFT_1347 at 1393.153 kb on - strand, within B158DRAFT_1347 at 1393.153 kb on - strand, within B158DRAFT_1347 at 1393.155 kb on + strand, within B158DRAFT_1347 at 1393.155 kb on + strand, within B158DRAFT_1347 at 1393.155 kb on + strand, within B158DRAFT_1347 at 1393.160 kb on + strand, within B158DRAFT_1347 at 1393.168 kb on - strand, within B158DRAFT_1347 at 1393.168 kb on - strand, within B158DRAFT_1347 at 1393.382 kb on + strand, within B158DRAFT_1347 at 1393.404 kb on - strand, within B158DRAFT_1347 at 1393.507 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.728 kb on + strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.736 kb on - strand at 1393.738 kb on - strand at 1393.745 kb on + strand at 1393.781 kb on + strand, within B158DRAFT_1348 at 1393.821 kb on + strand, within B158DRAFT_1348 at 1393.994 kb on + strand, within B158DRAFT_1348 at 1393.997 kb on - strand, within B158DRAFT_1348 at 1393.997 kb on - strand, within B158DRAFT_1348 at 1393.997 kb on - strand, within B158DRAFT_1348 at 1393.997 kb on - strand, within B158DRAFT_1348 at 1393.999 kb on + strand, within B158DRAFT_1348 at 1394.007 kb on + strand, within B158DRAFT_1348 at 1394.007 kb on - strand, within B158DRAFT_1348 at 1394.008 kb on - strand, within B158DRAFT_1348 at 1394.026 kb on + strand, within B158DRAFT_1348 at 1394.099 kb on - strand, within B158DRAFT_1348 at 1394.276 kb on + strand, within B158DRAFT_1348 at 1394.283 kb on - strand, within B158DRAFT_1348 at 1394.304 kb on + strand, within B158DRAFT_1348 at 1394.310 kb on + strand, within B158DRAFT_1348 at 1394.318 kb on - strand, within B158DRAFT_1348 at 1394.318 kb on - strand, within B158DRAFT_1348 at 1394.318 kb on - strand, within B158DRAFT_1348 at 1394.331 kb on - strand, within B158DRAFT_1348 at 1394.408 kb on + strand, within B158DRAFT_1348 at 1394.470 kb on - strand, within B158DRAFT_1348
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. syringaldehyde 2 mM remove 1,391,777 + B158DRAFT_1346 0.49 -1.4 1,391,890 + B158DRAFT_1346 0.58 -1.1 1,392,112 + B158DRAFT_1346 0.76 -0.5 1,392,587 - B158DRAFT_1347 0.13 -0.2 1,392,594 + B158DRAFT_1347 0.14 +0.2 1,392,660 - B158DRAFT_1347 0.20 +0.0 1,392,726 + B158DRAFT_1347 0.26 +1.2 1,392,920 + B158DRAFT_1347 0.43 -0.3 1,392,948 - B158DRAFT_1347 0.46 -2.0 1,393,063 - B158DRAFT_1347 0.56 -0.1 1,393,153 - B158DRAFT_1347 0.64 -0.3 1,393,153 - B158DRAFT_1347 0.64 +0.0 1,393,155 + B158DRAFT_1347 0.65 +0.3 1,393,155 + B158DRAFT_1347 0.65 -0.6 1,393,155 + B158DRAFT_1347 0.65 -0.2 1,393,160 + B158DRAFT_1347 0.65 +0.0 1,393,168 - B158DRAFT_1347 0.66 -0.2 1,393,168 - B158DRAFT_1347 0.66 -0.3 1,393,382 + B158DRAFT_1347 0.85 +0.0 1,393,404 - B158DRAFT_1347 0.87 -0.1 1,393,507 + +0.2 1,393,728 + -0.5 1,393,728 + +0.1 1,393,728 + -1.3 1,393,728 + -0.8 1,393,728 + -0.5 1,393,728 + +0.1 1,393,728 + +0.1 1,393,728 + +0.3 1,393,728 + -0.9 1,393,728 + +0.5 1,393,728 + +0.3 1,393,736 - -0.6 1,393,736 - +0.1 1,393,736 - +0.3 1,393,736 - -0.2 1,393,736 - -0.2 1,393,736 - +0.2 1,393,736 - -0.5 1,393,736 - +0.7 1,393,736 - +0.2 1,393,736 - +0.6 1,393,738 - -0.6 1,393,745 + +0.1 1,393,781 + B158DRAFT_1348 0.12 -0.6 1,393,821 + B158DRAFT_1348 0.16 +0.7 1,393,994 + B158DRAFT_1348 0.33 -0.2 1,393,997 - B158DRAFT_1348 0.34 -0.1 1,393,997 - B158DRAFT_1348 0.34 -0.5 1,393,997 - B158DRAFT_1348 0.34 +0.3 1,393,997 - B158DRAFT_1348 0.34 -0.3 1,393,999 + B158DRAFT_1348 0.34 -0.4 1,394,007 + B158DRAFT_1348 0.35 -0.2 1,394,007 - B158DRAFT_1348 0.35 +0.4 1,394,008 - B158DRAFT_1348 0.35 -0.4 1,394,026 + B158DRAFT_1348 0.37 +0.4 1,394,099 - B158DRAFT_1348 0.44 +0.2 1,394,276 + B158DRAFT_1348 0.61 +0.3 1,394,283 - B158DRAFT_1348 0.62 -0.2 1,394,304 + B158DRAFT_1348 0.64 -0.4 1,394,310 + B158DRAFT_1348 0.65 -0.2 1,394,318 - B158DRAFT_1348 0.65 +0.2 1,394,318 - B158DRAFT_1348 0.65 +0.1 1,394,318 - B158DRAFT_1348 0.65 -1.2 1,394,331 - B158DRAFT_1348 0.67 -0.1 1,394,408 + B158DRAFT_1348 0.74 -1.4 1,394,470 - B158DRAFT_1348 0.80 -1.6
Or see this region's nucleotide sequence