Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0880

Experiment: m.b. syringaldehyde 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0878 and B158DRAFT_0879 are separated by 87 nucleotidesB158DRAFT_0879 and B158DRAFT_0880 are separated by 2 nucleotidesB158DRAFT_0880 and B158DRAFT_0881 are separated by 152 nucleotides B158DRAFT_0878: B158DRAFT_0878 - Protein of unknown function (DUF3365)., at 893,841 to 894,422 _0878 B158DRAFT_0879: B158DRAFT_0879 - Predicted S-adenosylmethionine-dependent methyltransferase, at 894,510 to 895,133 _0879 B158DRAFT_0880: B158DRAFT_0880 - PilZ domain., at 895,136 to 895,528 _0880 B158DRAFT_0881: B158DRAFT_0881 - ATP-binding cassette protein, ChvD family, at 895,681 to 897,348 _0881 Position (kb) 895 896Strain fitness (log2 ratio) -1 0 1at 894.141 kb on - strand, within B158DRAFT_0878at 894.172 kb on - strand, within B158DRAFT_0878at 894.175 kb on + strand, within B158DRAFT_0878at 894.183 kb on - strand, within B158DRAFT_0878at 894.211 kb on - strand, within B158DRAFT_0878at 894.253 kb on - strand, within B158DRAFT_0878at 894.261 kb on - strand, within B158DRAFT_0878at 894.287 kb on + strand, within B158DRAFT_0878at 894.287 kb on + strand, within B158DRAFT_0878at 894.287 kb on + strand, within B158DRAFT_0878at 894.295 kb on - strand, within B158DRAFT_0878at 894.295 kb on - strand, within B158DRAFT_0878at 894.295 kb on - strand, within B158DRAFT_0878at 894.295 kb on - strand, within B158DRAFT_0878at 894.343 kb on + strand, within B158DRAFT_0878at 894.351 kb on - strand, within B158DRAFT_0878at 894.351 kb on - strand, within B158DRAFT_0878at 894.351 kb on - strand, within B158DRAFT_0878at 894.351 kb on - strand, within B158DRAFT_0878at 894.369 kb on - strandat 894.371 kb on - strandat 894.376 kb on - strandat 894.387 kb on + strandat 894.405 kb on + strandat 894.450 kb on + strandat 894.458 kb on - strandat 894.458 kb on - strandat 894.507 kb on + strandat 894.515 kb on - strandat 894.523 kb on + strandat 894.524 kb on + strandat 894.532 kb on - strandat 894.576 kb on - strand, within B158DRAFT_0879at 894.628 kb on - strand, within B158DRAFT_0879at 894.638 kb on - strand, within B158DRAFT_0879at 894.655 kb on - strand, within B158DRAFT_0879at 894.662 kb on + strand, within B158DRAFT_0879at 894.685 kb on + strand, within B158DRAFT_0879at 894.758 kb on - strand, within B158DRAFT_0879at 894.777 kb on + strand, within B158DRAFT_0879at 894.780 kb on - strand, within B158DRAFT_0879at 894.910 kb on - strand, within B158DRAFT_0879at 894.943 kb on + strand, within B158DRAFT_0879at 894.951 kb on - strand, within B158DRAFT_0879at 894.954 kb on + strand, within B158DRAFT_0879at 894.970 kb on - strand, within B158DRAFT_0879at 894.996 kb on - strand, within B158DRAFT_0879at 895.056 kb on + strand, within B158DRAFT_0879at 895.082 kb on + strandat 895.205 kb on - strand, within B158DRAFT_0880at 895.239 kb on + strand, within B158DRAFT_0880at 895.457 kb on - strand, within B158DRAFT_0880at 895.459 kb on - strand, within B158DRAFT_0880at 895.586 kb on - strandat 895.622 kb on + strandat 895.623 kb on - strandat 895.630 kb on - strandat 895.663 kb on - strandat 895.701 kb on + strandat 895.784 kb on - strandat 895.790 kb on + strandat 895.798 kb on - strandat 895.834 kb on + strandat 895.863 kb on + strand, within B158DRAFT_0881at 895.871 kb on - strand, within B158DRAFT_0881at 895.871 kb on - strand, within B158DRAFT_0881at 895.871 kb on - strand, within B158DRAFT_0881at 895.871 kb on - strand, within B158DRAFT_0881at 895.890 kb on - strand, within B158DRAFT_0881at 895.994 kb on + strand, within B158DRAFT_0881at 895.994 kb on + strand, within B158DRAFT_0881at 896.002 kb on - strand, within B158DRAFT_0881at 896.002 kb on - strand, within B158DRAFT_0881at 896.002 kb on - strand, within B158DRAFT_0881at 896.002 kb on - strand, within B158DRAFT_0881at 896.027 kb on + strand, within B158DRAFT_0881at 896.082 kb on + strand, within B158DRAFT_0881at 896.110 kb on + strand, within B158DRAFT_0881at 896.167 kb on + strand, within B158DRAFT_0881at 896.167 kb on + strand, within B158DRAFT_0881at 896.167 kb on + strand, within B158DRAFT_0881at 896.167 kb on + strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.175 kb on - strand, within B158DRAFT_0881at 896.225 kb on + strand, within B158DRAFT_0881at 896.227 kb on - strand, within B158DRAFT_0881at 896.229 kb on + strand, within B158DRAFT_0881at 896.295 kb on + strand, within B158DRAFT_0881at 896.295 kb on + strand, within B158DRAFT_0881at 896.359 kb on + strand, within B158DRAFT_0881at 896.359 kb on + strand, within B158DRAFT_0881at 896.359 kb on + strand, within B158DRAFT_0881at 896.359 kb on + strand, within B158DRAFT_0881at 896.367 kb on - strand, within B158DRAFT_0881at 896.373 kb on - strand, within B158DRAFT_0881at 896.383 kb on - strand, within B158DRAFT_0881at 896.387 kb on + strand, within B158DRAFT_0881at 896.403 kb on - strand, within B158DRAFT_0881at 896.403 kb on - strand, within B158DRAFT_0881at 896.403 kb on - strand, within B158DRAFT_0881at 896.447 kb on - strand, within B158DRAFT_0881at 896.518 kb on - strand, within B158DRAFT_0881

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 2 mM
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894,141 - B158DRAFT_0878 0.52 +0.1
894,172 - B158DRAFT_0878 0.57 +0.3
894,175 + B158DRAFT_0878 0.57 +0.1
894,183 - B158DRAFT_0878 0.59 -0.4
894,211 - B158DRAFT_0878 0.64 -0.3
894,253 - B158DRAFT_0878 0.71 -0.6
894,261 - B158DRAFT_0878 0.72 +0.8
894,287 + B158DRAFT_0878 0.77 -0.3
894,287 + B158DRAFT_0878 0.77 -0.1
894,287 + B158DRAFT_0878 0.77 -0.1
894,295 - B158DRAFT_0878 0.78 +0.1
894,295 - B158DRAFT_0878 0.78 -0.4
894,295 - B158DRAFT_0878 0.78 +0.4
894,295 - B158DRAFT_0878 0.78 -0.0
894,343 + B158DRAFT_0878 0.86 -0.1
894,351 - B158DRAFT_0878 0.88 -0.4
894,351 - B158DRAFT_0878 0.88 -1.0
894,351 - B158DRAFT_0878 0.88 +0.6
894,351 - B158DRAFT_0878 0.88 -0.1
894,369 - -0.1
894,371 - +0.1
894,376 - -0.2
894,387 + +0.2
894,405 + -0.1
894,450 + +0.7
894,458 - -0.5
894,458 - -0.1
894,507 + +0.1
894,515 - -0.5
894,523 + -0.4
894,524 + -0.0
894,532 - +0.4
894,576 - B158DRAFT_0879 0.11 -0.7
894,628 - B158DRAFT_0879 0.19 -0.2
894,638 - B158DRAFT_0879 0.21 +0.1
894,655 - B158DRAFT_0879 0.23 -0.1
894,662 + B158DRAFT_0879 0.24 +0.1
894,685 + B158DRAFT_0879 0.28 +0.0
894,758 - B158DRAFT_0879 0.40 -0.2
894,777 + B158DRAFT_0879 0.43 -0.0
894,780 - B158DRAFT_0879 0.43 +0.1
894,910 - B158DRAFT_0879 0.64 -0.1
894,943 + B158DRAFT_0879 0.69 -0.1
894,951 - B158DRAFT_0879 0.71 +0.3
894,954 + B158DRAFT_0879 0.71 +0.8
894,970 - B158DRAFT_0879 0.74 -1.0
894,996 - B158DRAFT_0879 0.78 +0.3
895,056 + B158DRAFT_0879 0.88 +0.1
895,082 + +0.1
895,205 - B158DRAFT_0880 0.18 +0.4
895,239 + B158DRAFT_0880 0.26 -0.1
895,457 - B158DRAFT_0880 0.82 +0.1
895,459 - B158DRAFT_0880 0.82 -0.1
895,586 - -0.1
895,622 + -0.0
895,623 - -0.2
895,630 - -0.3
895,663 - -0.2
895,701 + -0.4
895,784 - +0.1
895,790 + +0.4
895,798 - +1.2
895,834 + -0.3
895,863 + B158DRAFT_0881 0.11 -0.2
895,871 - B158DRAFT_0881 0.11 +0.6
895,871 - B158DRAFT_0881 0.11 -1.1
895,871 - B158DRAFT_0881 0.11 +0.2
895,871 - B158DRAFT_0881 0.11 -1.0
895,890 - B158DRAFT_0881 0.13 +0.3
895,994 + B158DRAFT_0881 0.19 +0.2
895,994 + B158DRAFT_0881 0.19 +0.1
896,002 - B158DRAFT_0881 0.19 +0.1
896,002 - B158DRAFT_0881 0.19 +0.1
896,002 - B158DRAFT_0881 0.19 -0.1
896,002 - B158DRAFT_0881 0.19 +0.1
896,027 + B158DRAFT_0881 0.21 +0.8
896,082 + B158DRAFT_0881 0.24 -0.1
896,110 + B158DRAFT_0881 0.26 -0.1
896,167 + B158DRAFT_0881 0.29 +0.3
896,167 + B158DRAFT_0881 0.29 -0.2
896,167 + B158DRAFT_0881 0.29 +0.7
896,167 + B158DRAFT_0881 0.29 +0.1
896,175 - B158DRAFT_0881 0.30 +0.3
896,175 - B158DRAFT_0881 0.30 +0.2
896,175 - B158DRAFT_0881 0.30 +0.2
896,175 - B158DRAFT_0881 0.30 +0.1
896,175 - B158DRAFT_0881 0.30 +0.0
896,175 - B158DRAFT_0881 0.30 -0.1
896,175 - B158DRAFT_0881 0.30 -0.1
896,175 - B158DRAFT_0881 0.30 +0.7
896,175 - B158DRAFT_0881 0.30 -0.1
896,225 + B158DRAFT_0881 0.33 +0.0
896,227 - B158DRAFT_0881 0.33 +0.1
896,229 + B158DRAFT_0881 0.33 -0.5
896,295 + B158DRAFT_0881 0.37 +0.2
896,295 + B158DRAFT_0881 0.37 -0.3
896,359 + B158DRAFT_0881 0.41 +0.3
896,359 + B158DRAFT_0881 0.41 +0.1
896,359 + B158DRAFT_0881 0.41 +0.3
896,359 + B158DRAFT_0881 0.41 -0.1
896,367 - B158DRAFT_0881 0.41 +0.0
896,373 - B158DRAFT_0881 0.41 +0.3
896,383 - B158DRAFT_0881 0.42 -0.2
896,387 + B158DRAFT_0881 0.42 +0.0
896,403 - B158DRAFT_0881 0.43 -0.1
896,403 - B158DRAFT_0881 0.43 +0.1
896,403 - B158DRAFT_0881 0.43 -0.9
896,447 - B158DRAFT_0881 0.46 +0.2
896,518 - B158DRAFT_0881 0.50 +0.1

Or see this region's nucleotide sequence