Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0534

Experiment: m.b. syringaldehyde 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0533 and B158DRAFT_0534 are separated by 12 nucleotidesB158DRAFT_0534 and B158DRAFT_0535 overlap by 11 nucleotides B158DRAFT_0533: B158DRAFT_0533 - Xaa-Pro aminopeptidase, at 538,831 to 540,150 _0533 B158DRAFT_0534: B158DRAFT_0534 - 2-polyprenyl-6-methoxyphenol 4-hydroxylase, at 540,163 to 541,401 _0534 B158DRAFT_0535: B158DRAFT_0535 - hypothetical protein, at 541,391 to 542,353 _0535 Position (kb) 540 541 542Strain fitness (log2 ratio) -3 -2 -1 0 1at 539.276 kb on - strand, within B158DRAFT_0533at 539.276 kb on - strand, within B158DRAFT_0533at 539.286 kb on - strand, within B158DRAFT_0533at 539.331 kb on - strand, within B158DRAFT_0533at 539.400 kb on + strand, within B158DRAFT_0533at 539.403 kb on - strand, within B158DRAFT_0533at 539.415 kb on + strand, within B158DRAFT_0533at 539.424 kb on - strand, within B158DRAFT_0533at 539.451 kb on + strand, within B158DRAFT_0533at 539.493 kb on + strand, within B158DRAFT_0533at 539.540 kb on + strand, within B158DRAFT_0533at 539.564 kb on + strand, within B158DRAFT_0533at 539.578 kb on + strand, within B158DRAFT_0533at 539.592 kb on - strand, within B158DRAFT_0533at 539.669 kb on + strand, within B158DRAFT_0533at 539.674 kb on + strand, within B158DRAFT_0533at 539.680 kb on + strand, within B158DRAFT_0533at 539.688 kb on + strand, within B158DRAFT_0533at 539.729 kb on + strand, within B158DRAFT_0533at 539.753 kb on - strand, within B158DRAFT_0533at 539.753 kb on - strand, within B158DRAFT_0533at 539.778 kb on + strand, within B158DRAFT_0533at 539.885 kb on + strand, within B158DRAFT_0533at 539.891 kb on + strand, within B158DRAFT_0533at 539.899 kb on - strand, within B158DRAFT_0533at 539.934 kb on + strand, within B158DRAFT_0533at 539.942 kb on - strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 539.994 kb on + strand, within B158DRAFT_0533at 540.002 kb on - strand, within B158DRAFT_0533at 540.002 kb on - strand, within B158DRAFT_0533at 540.002 kb on - strand, within B158DRAFT_0533at 540.069 kb on + strandat 540.070 kb on + strandat 540.070 kb on + strandat 540.078 kb on - strandat 540.078 kb on - strandat 540.084 kb on + strandat 540.084 kb on + strandat 540.084 kb on + strandat 540.123 kb on + strandat 540.123 kb on + strandat 540.123 kb on + strandat 540.130 kb on + strandat 540.135 kb on + strandat 541.481 kb on - strandat 541.483 kb on + strandat 541.491 kb on - strand, within B158DRAFT_0535at 541.497 kb on + strand, within B158DRAFT_0535at 541.497 kb on - strand, within B158DRAFT_0535at 541.505 kb on - strand, within B158DRAFT_0535at 541.521 kb on - strand, within B158DRAFT_0535at 541.566 kb on + strand, within B158DRAFT_0535at 541.566 kb on + strand, within B158DRAFT_0535at 541.574 kb on - strand, within B158DRAFT_0535at 541.614 kb on - strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.623 kb on + strand, within B158DRAFT_0535at 541.626 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.631 kb on - strand, within B158DRAFT_0535at 541.647 kb on + strand, within B158DRAFT_0535at 541.647 kb on + strand, within B158DRAFT_0535at 541.655 kb on - strand, within B158DRAFT_0535at 541.891 kb on + strand, within B158DRAFT_0535at 541.891 kb on + strand, within B158DRAFT_0535at 541.913 kb on + strand, within B158DRAFT_0535at 541.945 kb on + strand, within B158DRAFT_0535at 541.953 kb on - strand, within B158DRAFT_0535at 541.954 kb on - strand, within B158DRAFT_0535at 541.981 kb on - strand, within B158DRAFT_0535at 541.981 kb on - strand, within B158DRAFT_0535at 542.061 kb on - strand, within B158DRAFT_0535at 542.083 kb on - strand, within B158DRAFT_0535at 542.089 kb on + strand, within B158DRAFT_0535at 542.197 kb on + strand, within B158DRAFT_0535at 542.274 kb on - strandat 542.290 kb on - strandat 542.323 kb on + strandat 542.343 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 2 mM
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539,276 - B158DRAFT_0533 0.34 -1.9
539,276 - B158DRAFT_0533 0.34 -2.6
539,286 - B158DRAFT_0533 0.34 -1.0
539,331 - B158DRAFT_0533 0.38 -3.3
539,400 + B158DRAFT_0533 0.43 -0.3
539,403 - B158DRAFT_0533 0.43 -2.6
539,415 + B158DRAFT_0533 0.44 -0.1
539,424 - B158DRAFT_0533 0.45 -1.3
539,451 + B158DRAFT_0533 0.47 -0.1
539,493 + B158DRAFT_0533 0.50 -0.2
539,540 + B158DRAFT_0533 0.54 -0.3
539,564 + B158DRAFT_0533 0.56 +0.2
539,578 + B158DRAFT_0533 0.57 -0.0
539,592 - B158DRAFT_0533 0.58 -0.1
539,669 + B158DRAFT_0533 0.63 -0.1
539,674 + B158DRAFT_0533 0.64 +0.2
539,680 + B158DRAFT_0533 0.64 +0.1
539,688 + B158DRAFT_0533 0.65 -0.1
539,729 + B158DRAFT_0533 0.68 -0.1
539,753 - B158DRAFT_0533 0.70 -2.9
539,753 - B158DRAFT_0533 0.70 -2.2
539,778 + B158DRAFT_0533 0.72 -0.3
539,885 + B158DRAFT_0533 0.80 -0.1
539,891 + B158DRAFT_0533 0.80 +0.2
539,899 - B158DRAFT_0533 0.81 -1.0
539,934 + B158DRAFT_0533 0.84 -0.0
539,942 - B158DRAFT_0533 0.84 -1.4
539,994 + B158DRAFT_0533 0.88 -0.0
539,994 + B158DRAFT_0533 0.88 -0.0
539,994 + B158DRAFT_0533 0.88 -0.3
539,994 + B158DRAFT_0533 0.88 +0.1
540,002 - B158DRAFT_0533 0.89 -0.5
540,002 - B158DRAFT_0533 0.89 -0.6
540,002 - B158DRAFT_0533 0.89 -0.2
540,069 + -0.2
540,070 + -0.2
540,070 + -0.1
540,078 - -2.1
540,078 - -0.6
540,084 + +0.4
540,084 + -0.1
540,084 + +0.0
540,123 + +0.3
540,123 + -0.0
540,123 + -0.8
540,130 + +0.2
540,135 + +0.0
541,481 - -1.0
541,483 + -0.6
541,491 - B158DRAFT_0535 0.10 -0.5
541,497 + B158DRAFT_0535 0.11 -0.5
541,497 - B158DRAFT_0535 0.11 -1.7
541,505 - B158DRAFT_0535 0.12 -1.5
541,521 - B158DRAFT_0535 0.13 -1.0
541,566 + B158DRAFT_0535 0.18 -0.3
541,566 + B158DRAFT_0535 0.18 +0.3
541,574 - B158DRAFT_0535 0.19 -1.6
541,614 - B158DRAFT_0535 0.23 -1.7
541,623 + B158DRAFT_0535 0.24 +0.2
541,623 + B158DRAFT_0535 0.24 -0.2
541,623 + B158DRAFT_0535 0.24 +0.2
541,623 + B158DRAFT_0535 0.24 -1.1
541,623 + B158DRAFT_0535 0.24 -0.2
541,626 - B158DRAFT_0535 0.24 -1.7
541,631 - B158DRAFT_0535 0.25 -2.2
541,631 - B158DRAFT_0535 0.25 -1.0
541,631 - B158DRAFT_0535 0.25 -1.1
541,631 - B158DRAFT_0535 0.25 -1.3
541,631 - B158DRAFT_0535 0.25 -2.0
541,631 - B158DRAFT_0535 0.25 -1.4
541,631 - B158DRAFT_0535 0.25 -2.0
541,631 - B158DRAFT_0535 0.25 -1.3
541,647 + B158DRAFT_0535 0.27 -0.3
541,647 + B158DRAFT_0535 0.27 -0.0
541,655 - B158DRAFT_0535 0.27 -2.0
541,891 + B158DRAFT_0535 0.52 -0.2
541,891 + B158DRAFT_0535 0.52 -0.4
541,913 + B158DRAFT_0535 0.54 -0.4
541,945 + B158DRAFT_0535 0.58 +0.4
541,953 - B158DRAFT_0535 0.58 -1.1
541,954 - B158DRAFT_0535 0.58 -1.4
541,981 - B158DRAFT_0535 0.61 -3.1
541,981 - B158DRAFT_0535 0.61 -1.4
542,061 - B158DRAFT_0535 0.70 -1.1
542,083 - B158DRAFT_0535 0.72 -1.7
542,089 + B158DRAFT_0535 0.72 -0.0
542,197 + B158DRAFT_0535 0.84 +0.2
542,274 - -1.5
542,290 - -1.2
542,323 + -0.0
542,343 + -0.1

Or see this region's nucleotide sequence