Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0420

Experiment: m.b. syringaldehyde 2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0419 and B158DRAFT_0420 overlap by 1 nucleotidesB158DRAFT_0420 and B158DRAFT_0421 are separated by 12 nucleotidesB158DRAFT_0421 and B158DRAFT_0422 are separated by 9 nucleotides B158DRAFT_0419: B158DRAFT_0419 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 422,646 to 423,863 _0419 B158DRAFT_0420: B158DRAFT_0420 - 3-oxoacyl-(acyl-carrier-protein) reductase, putative, at 423,863 to 424,588 _0420 B158DRAFT_0421: B158DRAFT_0421 - Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase, at 424,601 to 425,077 _0421 B158DRAFT_0422: B158DRAFT_0422 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 425,087 to 426,280 _0422 Position (kb) 423 424 425Strain fitness (log2 ratio) -2 -1 0 1at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.863 kb on - strand, within B158DRAFT_0419at 422.892 kb on + strand, within B158DRAFT_0419at 422.892 kb on + strand, within B158DRAFT_0419at 422.892 kb on + strand, within B158DRAFT_0419at 422.900 kb on - strand, within B158DRAFT_0419at 422.900 kb on - strand, within B158DRAFT_0419at 422.900 kb on - strand, within B158DRAFT_0419at 422.900 kb on - strand, within B158DRAFT_0419at 422.900 kb on - strand, within B158DRAFT_0419at 422.960 kb on - strand, within B158DRAFT_0419at 422.960 kb on - strand, within B158DRAFT_0419at 422.962 kb on + strand, within B158DRAFT_0419at 422.976 kb on + strand, within B158DRAFT_0419at 422.976 kb on + strand, within B158DRAFT_0419at 422.976 kb on + strand, within B158DRAFT_0419at 422.996 kb on - strand, within B158DRAFT_0419at 423.005 kb on - strand, within B158DRAFT_0419at 423.068 kb on - strand, within B158DRAFT_0419at 423.129 kb on - strand, within B158DRAFT_0419at 423.153 kb on + strand, within B158DRAFT_0419at 423.281 kb on - strand, within B158DRAFT_0419at 423.283 kb on + strand, within B158DRAFT_0419at 423.291 kb on - strand, within B158DRAFT_0419at 423.293 kb on + strand, within B158DRAFT_0419at 423.331 kb on + strand, within B158DRAFT_0419at 423.348 kb on + strand, within B158DRAFT_0419at 423.356 kb on - strand, within B158DRAFT_0419at 423.356 kb on - strand, within B158DRAFT_0419at 423.363 kb on - strand, within B158DRAFT_0419at 423.363 kb on - strand, within B158DRAFT_0419at 423.363 kb on - strand, within B158DRAFT_0419at 423.377 kb on - strand, within B158DRAFT_0419at 423.390 kb on + strand, within B158DRAFT_0419at 423.393 kb on - strand, within B158DRAFT_0419at 423.399 kb on + strand, within B158DRAFT_0419at 423.453 kb on - strand, within B158DRAFT_0419at 423.461 kb on - strand, within B158DRAFT_0419at 423.484 kb on - strand, within B158DRAFT_0419at 423.499 kb on + strand, within B158DRAFT_0419at 423.527 kb on - strand, within B158DRAFT_0419at 423.566 kb on + strand, within B158DRAFT_0419at 423.588 kb on - strand, within B158DRAFT_0419at 423.610 kb on - strand, within B158DRAFT_0419at 423.610 kb on - strand, within B158DRAFT_0419at 423.626 kb on + strand, within B158DRAFT_0419at 423.629 kb on - strand, within B158DRAFT_0419at 423.629 kb on - strand, within B158DRAFT_0419at 423.634 kb on - strand, within B158DRAFT_0419at 423.696 kb on + strand, within B158DRAFT_0419at 423.696 kb on + strand, within B158DRAFT_0419at 423.697 kb on + strand, within B158DRAFT_0419at 423.726 kb on + strand, within B158DRAFT_0419at 423.739 kb on - strand, within B158DRAFT_0419at 423.759 kb on + strandat 423.759 kb on + strandat 423.762 kb on - strandat 423.802 kb on + strandat 423.861 kb on + strandat 423.869 kb on - strandat 423.923 kb on - strandat 423.943 kb on - strand, within B158DRAFT_0420at 424.106 kb on + strand, within B158DRAFT_0420at 424.130 kb on + strand, within B158DRAFT_0420at 424.149 kb on - strand, within B158DRAFT_0420at 424.161 kb on + strand, within B158DRAFT_0420at 424.169 kb on - strand, within B158DRAFT_0420at 424.183 kb on - strand, within B158DRAFT_0420at 424.314 kb on + strand, within B158DRAFT_0420at 424.316 kb on + strand, within B158DRAFT_0420at 424.317 kb on - strand, within B158DRAFT_0420at 424.334 kb on - strand, within B158DRAFT_0420at 424.474 kb on + strand, within B158DRAFT_0420at 424.490 kb on + strand, within B158DRAFT_0420at 424.515 kb on + strand, within B158DRAFT_0420at 424.523 kb on - strandat 424.564 kb on - strandat 424.571 kb on - strandat 424.576 kb on - strandat 424.578 kb on + strandat 424.586 kb on - strandat 424.586 kb on - strandat 424.683 kb on - strand, within B158DRAFT_0421at 424.738 kb on - strand, within B158DRAFT_0421at 424.738 kb on - strand, within B158DRAFT_0421at 424.740 kb on + strand, within B158DRAFT_0421at 424.740 kb on + strand, within B158DRAFT_0421at 424.740 kb on + strand, within B158DRAFT_0421at 424.740 kb on + strand, within B158DRAFT_0421at 424.740 kb on + strand, within B158DRAFT_0421at 424.748 kb on - strand, within B158DRAFT_0421at 424.748 kb on - strand, within B158DRAFT_0421at 424.748 kb on - strand, within B158DRAFT_0421at 424.748 kb on - strand, within B158DRAFT_0421at 424.865 kb on - strand, within B158DRAFT_0421at 424.865 kb on - strand, within B158DRAFT_0421at 424.869 kb on + strand, within B158DRAFT_0421at 424.869 kb on + strand, within B158DRAFT_0421at 424.871 kb on + strand, within B158DRAFT_0421at 424.910 kb on - strand, within B158DRAFT_0421at 425.153 kb on + strandat 425.153 kb on + strandat 425.173 kb on + strandat 425.173 kb on + strandat 425.173 kb on + strandat 425.173 kb on + strandat 425.181 kb on - strandat 425.249 kb on - strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.314 kb on + strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.322 kb on - strand, within B158DRAFT_0422at 425.345 kb on + strand, within B158DRAFT_0422at 425.353 kb on - strand, within B158DRAFT_0422at 425.374 kb on - strand, within B158DRAFT_0422at 425.387 kb on - strand, within B158DRAFT_0422at 425.412 kb on - strand, within B158DRAFT_0422at 425.413 kb on - strand, within B158DRAFT_0422at 425.448 kb on + strand, within B158DRAFT_0422at 425.456 kb on - strand, within B158DRAFT_0422at 425.456 kb on - strand, within B158DRAFT_0422at 425.458 kb on - strand, within B158DRAFT_0422at 425.487 kb on - strand, within B158DRAFT_0422at 425.533 kb on + strand, within B158DRAFT_0422at 425.533 kb on + strand, within B158DRAFT_0422at 425.540 kb on + strand, within B158DRAFT_0422at 425.541 kb on - strand, within B158DRAFT_0422at 425.545 kb on + strand, within B158DRAFT_0422

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 2 mM
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422,863 - B158DRAFT_0419 0.18 +0.0
422,863 - B158DRAFT_0419 0.18 +0.0
422,863 - B158DRAFT_0419 0.18 +0.1
422,863 - B158DRAFT_0419 0.18 -0.1
422,863 - B158DRAFT_0419 0.18 +0.1
422,863 - B158DRAFT_0419 0.18 -0.2
422,863 - B158DRAFT_0419 0.18 -0.6
422,892 + B158DRAFT_0419 0.20 -0.1
422,892 + B158DRAFT_0419 0.20 -0.0
422,892 + B158DRAFT_0419 0.20 -0.2
422,900 - B158DRAFT_0419 0.21 +0.1
422,900 - B158DRAFT_0419 0.21 -0.1
422,900 - B158DRAFT_0419 0.21 -0.3
422,900 - B158DRAFT_0419 0.21 -0.1
422,900 - B158DRAFT_0419 0.21 +0.2
422,960 - B158DRAFT_0419 0.26 -0.2
422,960 - B158DRAFT_0419 0.26 -0.1
422,962 + B158DRAFT_0419 0.26 +0.2
422,976 + B158DRAFT_0419 0.27 -0.1
422,976 + B158DRAFT_0419 0.27 +0.0
422,976 + B158DRAFT_0419 0.27 +0.1
422,996 - B158DRAFT_0419 0.29 +0.1
423,005 - B158DRAFT_0419 0.29 -0.2
423,068 - B158DRAFT_0419 0.35 -0.3
423,129 - B158DRAFT_0419 0.40 -0.1
423,153 + B158DRAFT_0419 0.42 +0.8
423,281 - B158DRAFT_0419 0.52 -0.5
423,283 + B158DRAFT_0419 0.52 -0.5
423,291 - B158DRAFT_0419 0.53 -0.0
423,293 + B158DRAFT_0419 0.53 -0.1
423,331 + B158DRAFT_0419 0.56 -0.4
423,348 + B158DRAFT_0419 0.58 -0.1
423,356 - B158DRAFT_0419 0.58 -1.8
423,356 - B158DRAFT_0419 0.58 -0.1
423,363 - B158DRAFT_0419 0.59 -0.5
423,363 - B158DRAFT_0419 0.59 +0.6
423,363 - B158DRAFT_0419 0.59 -0.4
423,377 - B158DRAFT_0419 0.60 +0.1
423,390 + B158DRAFT_0419 0.61 +0.1
423,393 - B158DRAFT_0419 0.61 -0.1
423,399 + B158DRAFT_0419 0.62 -0.0
423,453 - B158DRAFT_0419 0.66 -0.1
423,461 - B158DRAFT_0419 0.67 +0.3
423,484 - B158DRAFT_0419 0.69 +0.0
423,499 + B158DRAFT_0419 0.70 +0.2
423,527 - B158DRAFT_0419 0.72 -0.1
423,566 + B158DRAFT_0419 0.76 -0.0
423,588 - B158DRAFT_0419 0.77 -0.1
423,610 - B158DRAFT_0419 0.79 -0.5
423,610 - B158DRAFT_0419 0.79 +0.4
423,626 + B158DRAFT_0419 0.80 +0.0
423,629 - B158DRAFT_0419 0.81 -0.0
423,629 - B158DRAFT_0419 0.81 +0.0
423,634 - B158DRAFT_0419 0.81 -0.1
423,696 + B158DRAFT_0419 0.86 -0.1
423,696 + B158DRAFT_0419 0.86 -0.2
423,697 + B158DRAFT_0419 0.86 +0.5
423,726 + B158DRAFT_0419 0.89 -0.0
423,739 - B158DRAFT_0419 0.90 -0.0
423,759 + -0.1
423,759 + -0.4
423,762 - +1.2
423,802 + -0.3
423,861 + -0.2
423,869 - -0.2
423,923 - +0.1
423,943 - B158DRAFT_0420 0.11 -0.9
424,106 + B158DRAFT_0420 0.33 +0.1
424,130 + B158DRAFT_0420 0.37 +0.3
424,149 - B158DRAFT_0420 0.39 +0.2
424,161 + B158DRAFT_0420 0.41 +0.1
424,169 - B158DRAFT_0420 0.42 -0.4
424,183 - B158DRAFT_0420 0.44 -0.2
424,314 + B158DRAFT_0420 0.62 +0.6
424,316 + B158DRAFT_0420 0.62 -0.1
424,317 - B158DRAFT_0420 0.63 -0.0
424,334 - B158DRAFT_0420 0.65 -0.2
424,474 + B158DRAFT_0420 0.84 +0.0
424,490 + B158DRAFT_0420 0.86 -0.1
424,515 + B158DRAFT_0420 0.90 +0.3
424,523 - -0.0
424,564 - +0.1
424,571 - -0.5
424,576 - +0.4
424,578 + +0.3
424,586 - +0.0
424,586 - -0.2
424,683 - B158DRAFT_0421 0.17 +0.0
424,738 - B158DRAFT_0421 0.29 +0.5
424,738 - B158DRAFT_0421 0.29 +0.0
424,740 + B158DRAFT_0421 0.29 +0.2
424,740 + B158DRAFT_0421 0.29 +0.1
424,740 + B158DRAFT_0421 0.29 -0.4
424,740 + B158DRAFT_0421 0.29 -0.7
424,740 + B158DRAFT_0421 0.29 +0.6
424,748 - B158DRAFT_0421 0.31 +0.1
424,748 - B158DRAFT_0421 0.31 +0.7
424,748 - B158DRAFT_0421 0.31 +0.1
424,748 - B158DRAFT_0421 0.31 +0.2
424,865 - B158DRAFT_0421 0.55 -0.2
424,865 - B158DRAFT_0421 0.55 +0.3
424,869 + B158DRAFT_0421 0.56 +0.3
424,869 + B158DRAFT_0421 0.56 +0.2
424,871 + B158DRAFT_0421 0.57 -0.3
424,910 - B158DRAFT_0421 0.65 -0.3
425,153 + -0.6
425,153 + -0.2
425,173 + +0.3
425,173 + +0.3
425,173 + +0.2
425,173 + -0.0
425,181 - +0.1
425,249 - B158DRAFT_0422 0.14 -0.1
425,314 + B158DRAFT_0422 0.19 -0.1
425,314 + B158DRAFT_0422 0.19 +0.1
425,314 + B158DRAFT_0422 0.19 +0.2
425,314 + B158DRAFT_0422 0.19 +0.1
425,314 + B158DRAFT_0422 0.19 +0.2
425,314 + B158DRAFT_0422 0.19 +0.0
425,314 + B158DRAFT_0422 0.19 -0.2
425,314 + B158DRAFT_0422 0.19 -0.4
425,314 + B158DRAFT_0422 0.19 +0.2
425,314 + B158DRAFT_0422 0.19 -1.7
425,314 + B158DRAFT_0422 0.19 -0.5
425,322 - B158DRAFT_0422 0.20 +0.4
425,322 - B158DRAFT_0422 0.20 -0.0
425,322 - B158DRAFT_0422 0.20 +0.0
425,322 - B158DRAFT_0422 0.20 -0.1
425,322 - B158DRAFT_0422 0.20 +0.1
425,322 - B158DRAFT_0422 0.20 -1.2
425,322 - B158DRAFT_0422 0.20 -0.1
425,322 - B158DRAFT_0422 0.20 -0.1
425,322 - B158DRAFT_0422 0.20 -0.8
425,322 - B158DRAFT_0422 0.20 -0.2
425,322 - B158DRAFT_0422 0.20 -0.6
425,345 + B158DRAFT_0422 0.22 -0.7
425,353 - B158DRAFT_0422 0.22 +0.0
425,374 - B158DRAFT_0422 0.24 -0.7
425,387 - B158DRAFT_0422 0.25 -0.1
425,412 - B158DRAFT_0422 0.27 -0.2
425,413 - B158DRAFT_0422 0.27 +0.3
425,448 + B158DRAFT_0422 0.30 -0.2
425,456 - B158DRAFT_0422 0.31 +0.5
425,456 - B158DRAFT_0422 0.31 +0.3
425,458 - B158DRAFT_0422 0.31 -0.5
425,487 - B158DRAFT_0422 0.34 +0.1
425,533 + B158DRAFT_0422 0.37 +0.1
425,533 + B158DRAFT_0422 0.37 -0.2
425,540 + B158DRAFT_0422 0.38 -0.1
425,541 - B158DRAFT_0422 0.38 +0.0
425,545 + B158DRAFT_0422 0.38 -0.6

Or see this region's nucleotide sequence