Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3280

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
3,683,578	+		PfGW456L13_3279	0.24	-0.7
3,683,578	+		PfGW456L13_3279	0.24	+0.1
3,683,579	-		PfGW456L13_3279	0.24	+0.3
3,683,579	-		PfGW456L13_3279	0.24	-2.8
3,683,771	-		PfGW456L13_3279	0.42	-0.7
3,683,771	-		PfGW456L13_3279	0.42	-0.4
3,683,771	-		PfGW456L13_3279	0.42	+0.3
3,683,821	+		PfGW456L13_3279	0.47	+1.7
3,683,822	-		PfGW456L13_3279	0.47	-0.1
3,683,863	+		PfGW456L13_3279	0.51	+2.6
3,683,890	+		PfGW456L13_3279	0.54	+0.3
3,683,890	+		PfGW456L13_3279	0.54	+0.1
3,683,890	+		PfGW456L13_3279	0.54	-1.2
3,683,890	+		PfGW456L13_3279	0.54	+0.5
3,683,890	+		PfGW456L13_3279	0.54	+0.5
3,683,890	+		PfGW456L13_3279	0.54	+0.5
3,683,891	-		PfGW456L13_3279	0.54	+1.3
3,683,891	-		PfGW456L13_3279	0.54	-1.1
3,683,891	-		PfGW456L13_3279	0.54	-1.2
3,683,891	-		PfGW456L13_3279	0.54	-0.2
3,683,891	-		PfGW456L13_3279	0.54	+1.0
3,683,944	+		PfGW456L13_3279	0.59	+0.0
3,683,944	+		PfGW456L13_3279	0.59	+0.3
3,683,945	-		PfGW456L13_3279	0.59	-0.5
3,683,945	-		PfGW456L13_3279	0.59	+0.3
3,683,945	-		PfGW456L13_3279	0.59	+0.8
3,683,998	+		PfGW456L13_3279	0.65	+1.9
3,683,998	+		PfGW456L13_3279	0.65	-0.8
3,683,998	+		PfGW456L13_3279	0.65	+0.8
3,684,319	-				-0.3
3,684,319	-				-0.7
3,684,319	-				-0.7
3,684,319	-				+0.5
3,684,419	+				-2.3
3,684,419	+				+0.7
3,684,420	-				-0.7
3,684,420	-				+0.8
3,684,444	+				+1.8
3,684,444	+				+0.3
3,684,444	+				+0.9
3,684,445	-				+0.5
3,684,448	+				+1.9
3,684,448	+				-0.9
3,684,448	+				+0.7
3,684,448	+				+1.5
3,684,448	+				-1.2
3,684,449	-				+0.6
3,684,449	-				-0.2
3,684,449	-				-0.7
3,684,449	-				-0.1
3,684,449	-				-1.4
3,684,449	-				+0.6
3,684,449	-				-1.0
3,684,449	-				-1.1
3,684,449	-				+1.7
3,684,449	-				+0.2
3,684,449	-				-0.0
3,684,554	-				-0.5
3,684,653	+		PfGW456L13_3280	0.14	+0.8
3,684,653	+		PfGW456L13_3280	0.14	-0.4
3,684,653	+		PfGW456L13_3280	0.14	-0.2
3,684,654	-		PfGW456L13_3280	0.14	-1.7
3,684,654	-		PfGW456L13_3280	0.14	-1.9
3,684,656	+		PfGW456L13_3280	0.14	-0.9
3,684,656	+		PfGW456L13_3280	0.14	-0.5
3,684,656	+		PfGW456L13_3280	0.14	+0.3
3,684,657	-		PfGW456L13_3280	0.14	-0.2
3,684,657	-		PfGW456L13_3280	0.14	+2.2
3,684,714	+		PfGW456L13_3280	0.18	+0.2
3,684,715	-		PfGW456L13_3280	0.18	+1.1
3,684,858	-		PfGW456L13_3280	0.27	+0.8
3,684,858	-		PfGW456L13_3280	0.27	-0.8
3,684,858	-		PfGW456L13_3280	0.27	+0.7
3,684,858	-				+0.3
3,684,858	-		PfGW456L13_3280	0.27	-0.7
3,684,858	-		PfGW456L13_3280	0.27	-0.9
3,684,903	-		PfGW456L13_3280	0.30	-0.6
3,685,308	-		PfGW456L13_3280	0.55	-0.9
3,685,308	-		PfGW456L13_3280	0.55	+1.3
3,685,650	-		PfGW456L13_3280	0.77	+0.3
3,685,650	-		PfGW456L13_3280	0.77	-0.9
3,685,652	+		PfGW456L13_3280	0.77	-0.4
3,685,652	+		PfGW456L13_3280	0.77	+1.1
3,685,653	-		PfGW456L13_3280	0.77	+0.4
3,685,761	+		PfGW456L13_3280	0.84	-0.3
3,685,761	+		PfGW456L13_3280	0.84	+0.1
3,685,761	+		PfGW456L13_3280	0.84	-0.1
3,685,762	-		PfGW456L13_3280	0.84	-0.6
3,685,762	-		PfGW456L13_3280	0.84	+0.5
3,685,762	-		PfGW456L13_3280	0.84	+0.5
3,685,806	-		PfGW456L13_3280	0.87	+0.9
3,685,835	+		PfGW456L13_3280	0.89	+0.3
3,685,835	+		PfGW456L13_3280	0.89	+0.8
3,685,836	-		PfGW456L13_3280	0.89	-0.1
3,685,838	+		PfGW456L13_3280	0.89	+0.1
3,685,838	+		PfGW456L13_3280	0.89	+0.2
3,685,839	-		PfGW456L13_3280	0.89	-1.8
3,685,839	-		PfGW456L13_3280	0.89	-0.2
3,686,012	+				+0.1
3,686,012	+				-1.6
3,686,012	+				-0.2
3,686,012	+				+0.2
3,686,013	-				-0.7
3,686,013	-				-0.1
3,686,240	+				-0.9
3,686,240	+				-0.1
3,686,240	+				+0.5
3,686,321	-				+1.1
3,686,321	-				-0.1
3,686,358	-				-0.6
3,686,358	-				+1.1
3,686,371	+				-1.1
3,686,371	+				-0.5
3,686,371	+				+0.3
3,686,372	-				-0.9
3,686,473	+		PfGW456L13_3281	0.11	+0.2
3,686,474	-				-1.7
3,686,610	+		PfGW456L13_3281	0.16	+0.2
3,686,705	-		PfGW456L13_3281	0.20	-0.9
3,686,705	-		PfGW456L13_3281	0.20	+0.0
3,686,923	+		PfGW456L13_3281	0.29	-0.4
3,686,923	+		PfGW456L13_3281	0.29	+0.3
3,686,924	-		PfGW456L13_3281	0.29	+0.5
3,686,943	-		PfGW456L13_3281	0.29	+0.9
3,686,953	+		PfGW456L13_3281	0.30	-0.1
3,687,004	+				-1.2
3,687,005	-		PfGW456L13_3281	0.32	+0.5
3,687,005	-		PfGW456L13_3281	0.32	+0.6
3,687,005	-		PfGW456L13_3281	0.32	-1.2
3,687,005	-		PfGW456L13_3281	0.32	-1.4