Experiment: A22 0.04 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_310 and PfGW456L13_311 are separated by 49 nucleotides PfGW456L13_311 and PfGW456L13_312 are separated by 351 nucleotides PfGW456L13_312 and PfGW456L13_313 overlap by 4 nucleotides
PfGW456L13_310 - Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-), at 361,707 to 364,220
_310
PfGW456L13_311 - Glucans biosynthesis protein G precursor, at 364,270 to 366,054
_311
PfGW456L13_312 - D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1), at 366,406 to 366,843
_312
PfGW456L13_313 - Proline iminopeptidase (EC 3.4.11.5), at 366,840 to 367,811
_313
Position (kb) 364
365
366
367 Strain fitness (log2 ratio) -2
-1
0
1
2 at 363.296 kb on + strand, within PfGW456L13_310 at 363.303 kb on + strand, within PfGW456L13_310 at 363.304 kb on - strand, within PfGW456L13_310 at 363.396 kb on - strand, within PfGW456L13_310 at 363.492 kb on + strand, within PfGW456L13_310 at 363.493 kb on - strand, within PfGW456L13_310 at 363.594 kb on - strand, within PfGW456L13_310 at 363.594 kb on - strand, within PfGW456L13_310 at 363.703 kb on + strand, within PfGW456L13_310 at 363.703 kb on + strand, within PfGW456L13_310 at 363.704 kb on - strand, within PfGW456L13_310 at 363.704 kb on - strand, within PfGW456L13_310 at 363.781 kb on + strand, within PfGW456L13_310 at 363.837 kb on + strand, within PfGW456L13_310 at 363.838 kb on - strand, within PfGW456L13_310 at 363.850 kb on + strand, within PfGW456L13_310 at 363.965 kb on + strand, within PfGW456L13_310 at 363.965 kb on + strand, within PfGW456L13_310 at 363.966 kb on - strand, within PfGW456L13_310 at 363.966 kb on - strand, within PfGW456L13_310 at 364.022 kb on + strand at 364.022 kb on + strand at 364.261 kb on - strand at 364.261 kb on - strand at 364.271 kb on + strand at 364.271 kb on + strand at 364.272 kb on - strand at 364.272 kb on - strand at 364.272 kb on - strand at 364.292 kb on + strand at 364.292 kb on + strand at 364.293 kb on - strand at 364.383 kb on + strand at 364.384 kb on - strand at 364.524 kb on + strand, within PfGW456L13_311 at 364.524 kb on + strand, within PfGW456L13_311 at 364.524 kb on + strand, within PfGW456L13_311 at 364.525 kb on - strand, within PfGW456L13_311 at 364.525 kb on - strand, within PfGW456L13_311 at 364.525 kb on - strand, within PfGW456L13_311 at 364.647 kb on + strand, within PfGW456L13_311 at 364.647 kb on + strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.648 kb on - strand, within PfGW456L13_311 at 364.649 kb on + strand, within PfGW456L13_311 at 364.649 kb on + strand, within PfGW456L13_311 at 364.650 kb on - strand, within PfGW456L13_311 at 364.760 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.887 kb on + strand, within PfGW456L13_311 at 364.888 kb on - strand, within PfGW456L13_311 at 364.888 kb on - strand, within PfGW456L13_311 at 364.888 kb on - strand, within PfGW456L13_311 at 365.241 kb on - strand, within PfGW456L13_311 at 365.249 kb on - strand, within PfGW456L13_311 at 365.543 kb on + strand, within PfGW456L13_311 at 365.543 kb on + strand, within PfGW456L13_311 at 365.543 kb on + strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.544 kb on - strand, within PfGW456L13_311 at 365.574 kb on - strand, within PfGW456L13_311 at 365.651 kb on + strand, within PfGW456L13_311 at 365.717 kb on + strand, within PfGW456L13_311 at 365.717 kb on + strand, within PfGW456L13_311 at 365.718 kb on - strand, within PfGW456L13_311 at 365.718 kb on - strand, within PfGW456L13_311 at 365.718 kb on - strand, within PfGW456L13_311 at 365.864 kb on + strand, within PfGW456L13_311 at 365.864 kb on + strand, within PfGW456L13_311 at 365.956 kb on + strand at 365.956 kb on + strand at 365.956 kb on + strand at 365.957 kb on - strand at 365.957 kb on - strand at 365.957 kb on - strand at 365.957 kb on - strand at 366.076 kb on - strand at 366.076 kb on - strand at 366.129 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.147 kb on - strand at 366.253 kb on + strand at 366.253 kb on + strand at 366.254 kb on - strand at 366.254 kb on - strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.257 kb on + strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.258 kb on - strand at 366.302 kb on + strand at 366.303 kb on - strand at 366.303 kb on - strand at 366.303 kb on - strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.306 kb on + strand at 366.307 kb on - strand at 366.307 kb on - strand at 366.309 kb on + strand at 366.310 kb on - strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.319 kb on + strand at 366.343 kb on + strand at 366.343 kb on + strand at 366.344 kb on - strand at 366.344 kb on - strand at 366.416 kb on - strand at 366.416 kb on - strand at 366.427 kb on + strand at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.515 kb on - strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.517 kb on + strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.518 kb on - strand, within PfGW456L13_312 at 366.521 kb on + strand, within PfGW456L13_312 at 366.521 kb on + strand, within PfGW456L13_312 at 366.521 kb on + strand, within PfGW456L13_312 at 366.522 kb on - strand, within PfGW456L13_312 at 366.591 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.693 kb on + strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.694 kb on - strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.702 kb on + strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 366.703 kb on - strand, within PfGW456L13_312 at 367.022 kb on - strand, within PfGW456L13_313 at 367.022 kb on - strand, within PfGW456L13_313
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.04 mg/ml remove 363,296 + PfGW456L13_310 0.63 +0.6 363,303 + PfGW456L13_310 0.63 +1.5 363,304 - PfGW456L13_310 0.64 -0.4 363,396 - PfGW456L13_310 0.67 -0.0 363,492 + PfGW456L13_310 0.71 -0.0 363,493 - PfGW456L13_310 0.71 -0.1 363,594 - PfGW456L13_310 0.75 -0.2 363,594 - PfGW456L13_310 0.75 -1.0 363,703 + PfGW456L13_310 0.79 -0.6 363,703 + PfGW456L13_310 0.79 -2.5 363,704 - PfGW456L13_310 0.79 +1.0 363,704 - PfGW456L13_310 0.79 +0.4 363,781 + PfGW456L13_310 0.82 +0.3 363,837 + PfGW456L13_310 0.85 -0.1 363,838 - PfGW456L13_310 0.85 +0.9 363,850 + PfGW456L13_310 0.85 -0.0 363,965 + PfGW456L13_310 0.90 +1.2 363,965 + PfGW456L13_310 0.90 -0.2 363,966 - PfGW456L13_310 0.90 +1.5 363,966 - PfGW456L13_310 0.90 -0.7 364,022 + +0.4 364,022 + +0.6 364,261 - -0.4 364,261 - +0.8 364,271 + +1.1 364,271 + +2.4 364,272 - +1.1 364,272 - +1.3 364,272 - +0.9 364,292 + -0.8 364,292 + -1.2 364,293 - -0.4 364,383 + -0.3 364,384 - -0.7 364,524 + PfGW456L13_311 0.14 -0.3 364,524 + PfGW456L13_311 0.14 +0.2 364,524 + PfGW456L13_311 0.14 -0.3 364,525 - PfGW456L13_311 0.14 -0.7 364,525 - PfGW456L13_311 0.14 -0.4 364,525 - PfGW456L13_311 0.14 -0.7 364,647 + PfGW456L13_311 0.21 +0.9 364,647 + PfGW456L13_311 0.21 +0.5 364,648 - PfGW456L13_311 0.21 +0.2 364,648 - PfGW456L13_311 0.21 -0.2 364,648 - PfGW456L13_311 0.21 +0.1 364,648 - PfGW456L13_311 0.21 +0.0 364,648 - PfGW456L13_311 0.21 +0.2 364,649 + PfGW456L13_311 0.21 +0.2 364,649 + PfGW456L13_311 0.21 -1.1 364,650 - PfGW456L13_311 0.21 -2.3 364,760 + PfGW456L13_311 0.27 +0.1 364,887 + PfGW456L13_311 0.35 -0.4 364,887 + PfGW456L13_311 0.35 +0.8 364,887 + PfGW456L13_311 0.35 -0.3 364,887 + PfGW456L13_311 0.35 +1.2 364,887 + PfGW456L13_311 0.35 +0.6 364,888 - PfGW456L13_311 0.35 -1.8 364,888 - PfGW456L13_311 0.35 -0.4 364,888 - PfGW456L13_311 0.35 -0.6 365,241 - PfGW456L13_311 0.54 +0.2 365,249 - PfGW456L13_311 0.55 -0.0 365,543 + PfGW456L13_311 0.71 -1.1 365,543 + PfGW456L13_311 0.71 -0.1 365,543 + PfGW456L13_311 0.71 -1.1 365,544 - PfGW456L13_311 0.71 +1.4 365,544 - PfGW456L13_311 0.71 +1.6 365,544 - PfGW456L13_311 0.71 +0.8 365,544 - PfGW456L13_311 0.71 -0.3 365,574 - PfGW456L13_311 0.73 +0.2 365,651 + PfGW456L13_311 0.77 +1.2 365,717 + PfGW456L13_311 0.81 +0.7 365,717 + PfGW456L13_311 0.81 -1.1 365,718 - PfGW456L13_311 0.81 -1.7 365,718 - PfGW456L13_311 0.81 +0.4 365,718 - PfGW456L13_311 0.81 -0.1 365,864 + PfGW456L13_311 0.89 -2.0 365,864 + PfGW456L13_311 0.89 +0.6 365,956 + -0.8 365,956 + +0.1 365,956 + +0.2 365,957 - -1.1 365,957 - +0.1 365,957 - -0.1 365,957 - +1.0 366,076 - -0.1 366,076 - -0.2 366,129 - -0.5 366,147 - -2.1 366,147 - +2.2 366,147 - +0.4 366,147 - +0.1 366,147 - -0.3 366,147 - +0.3 366,147 - -0.0 366,147 - +0.6 366,253 + -0.8 366,253 + -0.1 366,254 - -2.7 366,254 - +1.2 366,257 + +0.6 366,257 + +1.5 366,257 + +0.0 366,257 + -0.2 366,257 + +0.1 366,258 - -0.6 366,258 - -1.5 366,258 - -0.4 366,258 - +0.2 366,258 - -0.6 366,258 - +0.5 366,258 - +0.6 366,302 + +0.9 366,303 - +0.0 366,303 - +0.8 366,303 - +0.3 366,306 + +0.0 366,306 + +0.2 366,306 + +0.5 366,306 + +0.7 366,306 + -0.6 366,306 + +0.6 366,306 + -0.9 366,306 + +1.8 366,306 + -0.3 366,306 + -0.5 366,307 - -0.1 366,307 - -0.1 366,309 + +0.8 366,310 - -0.8 366,319 + -0.2 366,319 + +0.5 366,319 + -0.3 366,319 + +0.9 366,319 + -0.0 366,343 + -0.8 366,343 + +1.8 366,344 - +0.2 366,344 - +0.5 366,416 - +1.1 366,416 - +1.0 366,427 + -0.6 366,515 - PfGW456L13_312 0.25 -0.1 366,515 - PfGW456L13_312 0.25 -1.4 366,515 - PfGW456L13_312 0.25 -0.2 366,515 - PfGW456L13_312 0.25 -0.5 366,515 - PfGW456L13_312 0.25 -0.2 366,517 + PfGW456L13_312 0.25 +0.6 366,517 + PfGW456L13_312 0.25 +0.5 366,517 + PfGW456L13_312 0.25 +0.6 366,517 + PfGW456L13_312 0.25 +0.4 366,517 + PfGW456L13_312 0.25 +0.6 366,517 + PfGW456L13_312 0.25 +0.2 366,517 + PfGW456L13_312 0.25 -0.6 366,517 + PfGW456L13_312 0.25 +0.2 366,518 - PfGW456L13_312 0.26 +0.1 366,518 - PfGW456L13_312 0.26 +1.9 366,518 - PfGW456L13_312 0.26 -0.6 366,518 - PfGW456L13_312 0.26 +0.5 366,518 - PfGW456L13_312 0.26 -0.2 366,518 - PfGW456L13_312 0.26 +0.5 366,518 - PfGW456L13_312 0.26 +0.2 366,518 - PfGW456L13_312 0.26 +0.3 366,521 + PfGW456L13_312 0.26 -0.1 366,521 + PfGW456L13_312 0.26 -0.5 366,521 + PfGW456L13_312 0.26 +0.4 366,522 - PfGW456L13_312 0.26 +0.2 366,591 + PfGW456L13_312 0.42 +0.3 366,693 + PfGW456L13_312 0.66 +0.5 366,693 + PfGW456L13_312 0.66 -0.4 366,693 + PfGW456L13_312 0.66 +0.4 366,693 + PfGW456L13_312 0.66 -0.2 366,693 + PfGW456L13_312 0.66 +1.9 366,693 + PfGW456L13_312 0.66 +0.3 366,693 + PfGW456L13_312 0.66 -0.2 366,693 + PfGW456L13_312 0.66 +0.2 366,693 + PfGW456L13_312 0.66 -0.2 366,693 + PfGW456L13_312 0.66 +0.9 366,693 + PfGW456L13_312 0.66 +0.9 366,694 - PfGW456L13_312 0.66 -0.8 366,694 - PfGW456L13_312 0.66 +0.1 366,694 - PfGW456L13_312 0.66 -0.6 366,694 - PfGW456L13_312 0.66 +0.1 366,694 - PfGW456L13_312 0.66 +0.4 366,694 - PfGW456L13_312 0.66 -0.5 366,702 + PfGW456L13_312 0.68 +0.6 366,702 + PfGW456L13_312 0.68 +0.1 366,702 + PfGW456L13_312 0.68 -0.4 366,702 + PfGW456L13_312 0.68 +0.1 366,703 - PfGW456L13_312 0.68 -0.0 366,703 - PfGW456L13_312 0.68 -2.7 366,703 - PfGW456L13_312 0.68 +0.4 366,703 - PfGW456L13_312 0.68 -0.1 366,703 - PfGW456L13_312 0.68 -0.1 367,022 - PfGW456L13_313 0.19 -0.1 367,022 - PfGW456L13_313 0.19 +0.3
Or see this region's nucleotide sequence