Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1929

Experiment: A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.04 mg/ml
2,121,907	-		PfGW456L13_1928	0.33	-1.5
2,121,984	+		PfGW456L13_1928	0.39	-0.3
2,121,984	+		PfGW456L13_1928	0.39	+0.2
2,121,984	+		PfGW456L13_1928	0.39	-0.1
2,121,985	-		PfGW456L13_1928	0.40	+0.2
2,121,985	-		PfGW456L13_1928	0.40	-0.3
2,121,985	-		PfGW456L13_1928	0.40	-1.1
2,122,084	-		PfGW456L13_1928	0.48	+0.6
2,122,100	+		PfGW456L13_1928	0.49	-0.9
2,122,100	+		PfGW456L13_1928	0.49	-0.2
2,122,100	+		PfGW456L13_1928	0.49	-0.2
2,122,101	-		PfGW456L13_1928	0.49	-0.6
2,122,101	-		PfGW456L13_1928	0.49	+1.0
2,122,101	-		PfGW456L13_1928	0.49	-0.0
2,122,114	-		PfGW456L13_1928	0.50	+0.5
2,122,311	+		PfGW456L13_1928	0.66	-0.0
2,122,311	+		PfGW456L13_1928	0.66	-0.3
2,122,311	+		PfGW456L13_1928	0.66	-0.0
2,122,311	+		PfGW456L13_1928	0.66	+0.1
2,122,311	+		PfGW456L13_1928	0.66	+1.0
2,122,311	+		PfGW456L13_1928	0.66	+0.3
2,122,312	-		PfGW456L13_1928	0.66	+0.4
2,122,312	-		PfGW456L13_1928	0.66	+0.4
2,122,312	-		PfGW456L13_1928	0.66	-1.0
2,122,312	-		PfGW456L13_1928	0.66	+0.2
2,122,312	-		PfGW456L13_1928	0.66	-0.2
2,122,312	-		PfGW456L13_1928	0.66	-0.7
2,122,312	-		PfGW456L13_1928	0.66	+0.5
2,122,312	-		PfGW456L13_1928	0.66	+2.0
2,122,312	-		PfGW456L13_1928	0.66	-1.1
2,122,327	-		PfGW456L13_1928	0.68	-1.1
2,122,461	+		PfGW456L13_1928	0.79	-0.8
2,122,461	+		PfGW456L13_1928	0.79	+0.8
2,122,462	-		PfGW456L13_1928	0.79	-0.2
2,122,462	-		PfGW456L13_1928	0.79	-0.2
2,122,512	+		PfGW456L13_1928	0.83	-0.4
2,122,665	+				-0.2
2,122,682	+				+0.0
2,122,682	+				+0.6
2,122,682	+				+1.3
2,122,683	-				-0.7
2,122,683	-				+0.4
2,122,683	-				+0.8
2,122,738	+				-0.3
2,122,738	+				+0.0
2,122,738	+				+0.8
2,122,738	+				+0.0
2,122,738	+				+0.2
2,122,739	-				-0.4
2,122,739	-				-0.9
2,122,739	-				+0.0
2,122,739	-				-0.8
2,122,739	-				-0.1
2,122,739	-				-0.4
2,122,739	-				+0.9
2,122,739	-				-0.0
2,122,795	+				-0.1
2,122,795	+				+0.2
2,122,830	+				-1.0
2,122,830	+				+1.0
2,122,830	+				+1.0
2,122,831	-				+0.2
2,122,869	-				-0.5
2,122,869	-				-1.3
2,123,008	-		PfGW456L13_1929	0.22	+0.1
2,123,008	-		PfGW456L13_1929	0.22	-0.4
2,123,008	-		PfGW456L13_1929	0.22	+0.1
2,123,008	-		PfGW456L13_1929	0.22	+0.7
2,123,050	-		PfGW456L13_1929	0.29	-1.2
2,123,050	-		PfGW456L13_1929	0.29	+0.0
2,123,100	+		PfGW456L13_1929	0.36	-0.3
2,123,100	+		PfGW456L13_1929	0.36	+0.8
2,123,100	+		PfGW456L13_1929	0.36	-0.2
2,123,101	-		PfGW456L13_1929	0.36	+0.4
2,123,101	-		PfGW456L13_1929	0.36	-0.3
2,123,121	+		PfGW456L13_1929	0.39	+1.1
2,123,121	+		PfGW456L13_1929	0.39	+0.4
2,123,121	+		PfGW456L13_1929	0.39	+0.2
2,123,121	+		PfGW456L13_1929	0.39	+0.3
2,123,121	+		PfGW456L13_1929	0.39	+0.8
2,123,121	+		PfGW456L13_1929	0.39	+0.6
2,123,121	+		PfGW456L13_1929	0.39	-0.2
2,123,121	+		PfGW456L13_1929	0.39	-0.1
2,123,121	+		PfGW456L13_1929	0.39	-0.3
2,123,122	-		PfGW456L13_1929	0.40	-0.4
2,123,122	-		PfGW456L13_1929	0.40	+0.0
2,123,122	-		PfGW456L13_1929	0.40	+0.1
2,123,122	-		PfGW456L13_1929	0.40	-0.5
2,123,122	-		PfGW456L13_1929	0.40	+0.7
2,123,415	+		PfGW456L13_1929	0.84	+0.2
2,123,416	-		PfGW456L13_1929	0.84	-0.5
2,123,473	-				-0.9
2,123,520	+				-0.8
2,123,520	+				+1.2
2,123,521	-				-0.2
2,123,521	-				-0.4
2,123,521	-				-0.1
2,123,521	-				-2.1
2,123,521	-				-0.3
2,123,546	+				-0.4
2,123,546	+				-1.1
2,123,546	+				-0.1
2,123,546	+				-0.4
2,123,546	+				+0.4
2,123,546	+				+0.4
2,123,546	+				+0.8
2,123,546	+				-0.4
2,123,547	-				+0.4
2,123,547	-				+0.2
2,123,547	-				-0.9
2,123,547	-				+0.3
2,123,547	-				+0.2
2,123,547	-				+0.5
2,123,547	-				+0.2
2,123,547	-				+0.3
2,123,548	+				+0.8
2,123,548	+				-0.1
2,123,549	-				-0.1
2,123,600	+				+0.2
2,123,600	+				-0.1
2,123,601	-				+0.3
2,123,601	-				-0.9
2,123,601	-				-0.0
2,123,677	-		PfGW456L13_1930	0.18	-0.3
2,123,767	+		PfGW456L13_1930	0.36	-0.8
2,123,768	-		PfGW456L13_1930	0.37	-0.6
2,123,809	+		PfGW456L13_1930	0.45	+0.0
2,123,809	+		PfGW456L13_1930	0.45	-0.2
2,123,810	-		PfGW456L13_1930	0.45	-0.6
2,123,810	-		PfGW456L13_1930	0.45	+1.3
2,123,810	-		PfGW456L13_1930	0.45	+0.2
2,123,810	-		PfGW456L13_1930	0.45	-0.4
2,123,867	+		PfGW456L13_1930	0.57	-0.7
2,123,867	+		PfGW456L13_1930	0.57	-0.1
2,123,868	-		PfGW456L13_1930	0.57	-0.2
2,123,887	+		PfGW456L13_1930	0.61	+2.4
2,123,887	+		PfGW456L13_1930	0.61	-1.9
2,123,887	+		PfGW456L13_1930	0.61	+0.1
2,123,887	+		PfGW456L13_1930	0.61	-0.8
2,123,887	+		PfGW456L13_1930	0.61	-0.6
2,123,887	+		PfGW456L13_1930	0.61	-1.3
2,123,888	-		PfGW456L13_1930	0.61	+0.0
2,123,888	-		PfGW456L13_1930	0.61	+1.0
2,123,941	+		PfGW456L13_1930	0.72	-0.2
2,123,941	+		PfGW456L13_1930	0.72	-0.6
2,123,941	+		PfGW456L13_1930	0.72	-1.0
2,123,941	+		PfGW456L13_1930	0.72	+0.3
2,123,941	+		PfGW456L13_1930	0.72	-1.0
2,123,942	-		PfGW456L13_1930	0.72	+0.5
2,123,942	-		PfGW456L13_1930	0.72	+0.8
2,123,981	+		PfGW456L13_1930	0.80	+0.2
2,123,982	-		PfGW456L13_1930	0.81	+0.4
2,123,982	-		PfGW456L13_1930	0.81	-0.9
2,124,007	+		PfGW456L13_1930	0.86	-0.3
2,124,007	+		PfGW456L13_1930	0.86	-0.5
2,124,134	+				+0.6
2,124,135	-				+0.0
2,124,242	+		PfGW456L13_1931	0.14	-0.4
2,124,242	+		PfGW456L13_1931	0.14	+1.0
2,124,242	+		PfGW456L13_1931	0.14	-0.5
2,124,242	+		PfGW456L13_1931	0.14	-0.1
2,124,242	+		PfGW456L13_1931	0.14	+0.5
2,124,242	+		PfGW456L13_1931	0.14	-0.9
2,124,243	-		PfGW456L13_1931	0.14	+0.5
2,124,243	-		PfGW456L13_1931	0.14	+0.2
2,124,243	-		PfGW456L13_1931	0.14	-0.5
2,124,333	+		PfGW456L13_1931	0.33	-0.0
2,124,465	-		PfGW456L13_1931	0.60	+0.3