Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2412

Experiment: LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF2411 and GFF2412 are separated by 110 nucleotidesGFF2412 and GFF2413 are separated by 26 nucleotides GFF2411 - Histidyl-tRNA synthetase (EC 6.1.1.21), at 23,355 to 24,629 GFF2411 GFF2412 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1), at 24,740 to 25,858 GFF2412 GFF2413 - FIG021952: putative membrane protein, at 25,885 to 26,889 GFF2413 Position (kb) 24 25 26Strain fitness (log2 ratio) -1 0 1at 25.912 kb on - strandat 26.017 kb on - strand, within GFF2413at 26.042 kb on - strand, within GFF2413

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
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25,912 - -0.7
26,017 - GFF2413 0.13 -0.8
26,042 - GFF2413 0.16 +0.1

Or see this region's nucleotide sequence