Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4249 and Echvi_4250 are separated by 87 nucleotides Echvi_4250 and Echvi_4251 are separated by 317 nucleotides Echvi_4251 and Echvi_4252 are separated by 911 nucleotides
Echvi_4249: Echvi_4249 - hypothetical protein, at 5,097,559 to 5,097,954
_4249
Echvi_4250: Echvi_4250 - hypothetical protein, at 5,098,042 to 5,098,476
_4250
Echvi_4251: Echvi_4251 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 5,098,794 to 5,099,493
_4251
Echvi_4252: Echvi_4252 - hypothetical protein, at 5,100,405 to 5,100,890
_4252
Position (kb)
5098
5099
5100 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5097.887 kb on + strand, within Echvi_4249 at 5097.931 kb on - strand at 5098.009 kb on + strand at 5098.009 kb on + strand at 5098.009 kb on + strand at 5098.010 kb on - strand at 5098.011 kb on + strand at 5098.011 kb on + strand at 5098.012 kb on - strand at 5098.033 kb on + strand at 5098.171 kb on - strand, within Echvi_4250 at 5098.171 kb on - strand, within Echvi_4250 at 5098.174 kb on + strand, within Echvi_4250 at 5098.174 kb on + strand, within Echvi_4250 at 5098.174 kb on + strand, within Echvi_4250 at 5098.175 kb on - strand, within Echvi_4250 at 5098.175 kb on - strand, within Echvi_4250 at 5098.175 kb on - strand, within Echvi_4250 at 5098.175 kb on - strand, within Echvi_4250 at 5098.183 kb on - strand, within Echvi_4250 at 5098.189 kb on + strand, within Echvi_4250 at 5098.190 kb on - strand, within Echvi_4250 at 5098.190 kb on - strand, within Echvi_4250 at 5098.339 kb on + strand, within Echvi_4250 at 5098.340 kb on - strand, within Echvi_4250 at 5098.341 kb on + strand, within Echvi_4250 at 5098.366 kb on - strand, within Echvi_4250 at 5098.437 kb on + strand at 5098.438 kb on - strand at 5098.440 kb on + strand at 5098.496 kb on + strand at 5098.496 kb on + strand at 5098.497 kb on - strand at 5098.507 kb on + strand at 5098.507 kb on + strand at 5098.510 kb on + strand at 5098.510 kb on + strand at 5098.510 kb on + strand at 5098.539 kb on + strand at 5098.549 kb on + strand at 5098.549 kb on + strand at 5098.550 kb on - strand at 5098.550 kb on - strand at 5098.550 kb on - strand at 5098.550 kb on - strand at 5098.552 kb on + strand at 5098.553 kb on - strand at 5098.560 kb on + strand at 5098.580 kb on + strand at 5098.581 kb on - strand at 5098.660 kb on - strand at 5098.679 kb on + strand at 5098.680 kb on - strand at 5098.697 kb on - strand at 5098.697 kb on - strand at 5098.701 kb on + strand at 5098.702 kb on - strand at 5098.782 kb on - strand at 5098.826 kb on - strand at 5098.919 kb on - strand, within Echvi_4251 at 5098.998 kb on + strand, within Echvi_4251 at 5098.999 kb on - strand, within Echvi_4251 at 5098.999 kb on - strand, within Echvi_4251 at 5098.999 kb on - strand, within Echvi_4251 at 5098.999 kb on - strand, within Echvi_4251 at 5099.034 kb on - strand, within Echvi_4251 at 5099.063 kb on + strand, within Echvi_4251 at 5099.063 kb on + strand, within Echvi_4251 at 5099.064 kb on - strand, within Echvi_4251 at 5099.068 kb on + strand, within Echvi_4251 at 5099.068 kb on + strand, within Echvi_4251 at 5099.081 kb on - strand, within Echvi_4251 at 5099.147 kb on + strand, within Echvi_4251 at 5099.147 kb on + strand, within Echvi_4251 at 5099.147 kb on + strand, within Echvi_4251 at 5099.148 kb on - strand, within Echvi_4251 at 5099.148 kb on - strand, within Echvi_4251 at 5099.148 kb on - strand, within Echvi_4251 at 5099.237 kb on + strand, within Echvi_4251 at 5099.270 kb on + strand, within Echvi_4251 at 5099.270 kb on + strand, within Echvi_4251 at 5099.271 kb on - strand, within Echvi_4251 at 5099.272 kb on + strand, within Echvi_4251 at 5099.272 kb on + strand, within Echvi_4251 at 5099.273 kb on - strand, within Echvi_4251 at 5099.273 kb on - strand, within Echvi_4251 at 5099.273 kb on - strand, within Echvi_4251 at 5099.340 kb on + strand, within Echvi_4251 at 5099.341 kb on - strand, within Echvi_4251 at 5099.424 kb on - strand at 5099.424 kb on - strand at 5099.481 kb on - strand at 5099.519 kb on + strand at 5099.519 kb on + strand at 5099.525 kb on - strand at 5099.543 kb on + strand at 5099.544 kb on - strand at 5099.546 kb on - strand at 5099.697 kb on - strand at 5099.700 kb on + strand at 5099.700 kb on + strand at 5099.700 kb on + strand at 5099.701 kb on - strand at 5099.790 kb on - strand at 5099.809 kb on - strand at 5099.890 kb on - strand at 5099.926 kb on - strand at 5100.021 kb on + strand at 5100.021 kb on + strand at 5100.022 kb on - strand at 5100.022 kb on - strand at 5100.087 kb on + strand at 5100.141 kb on + strand at 5100.155 kb on + strand at 5100.201 kb on - strand at 5100.333 kb on + strand at 5100.358 kb on + strand at 5100.358 kb on + strand at 5100.376 kb on - strand at 5100.376 kb on - strand at 5100.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 5,097,887 + Echvi_4249 0.83 -0.3 5,097,931 - -0.9 5,098,009 + -0.0 5,098,009 + +1.5 5,098,009 + -0.0 5,098,010 - -0.4 5,098,011 + +0.8 5,098,011 + +0.8 5,098,012 - -0.0 5,098,033 + -0.9 5,098,171 - Echvi_4250 0.30 -0.0 5,098,171 - Echvi_4250 0.30 +1.6 5,098,174 + Echvi_4250 0.30 -0.3 5,098,174 + Echvi_4250 0.30 +0.6 5,098,174 + Echvi_4250 0.30 -0.3 5,098,175 - Echvi_4250 0.31 -0.8 5,098,175 - Echvi_4250 0.31 +0.0 5,098,175 - Echvi_4250 0.31 -0.6 5,098,175 - Echvi_4250 0.31 -0.5 5,098,183 - Echvi_4250 0.32 +0.6 5,098,189 + Echvi_4250 0.34 -2.3 5,098,190 - Echvi_4250 0.34 +0.2 5,098,190 - Echvi_4250 0.34 +1.1 5,098,339 + Echvi_4250 0.68 -0.5 5,098,340 - Echvi_4250 0.69 +0.0 5,098,341 + Echvi_4250 0.69 +0.1 5,098,366 - Echvi_4250 0.74 +1.2 5,098,437 + -0.9 5,098,438 - -1.4 5,098,440 + -0.6 5,098,496 + -1.1 5,098,496 + +0.8 5,098,497 - -0.2 5,098,507 + +0.3 5,098,507 + -0.2 5,098,510 + +0.4 5,098,510 + -2.9 5,098,510 + -0.3 5,098,539 + +1.0 5,098,549 + +1.6 5,098,549 + -0.5 5,098,550 - +0.4 5,098,550 - -0.2 5,098,550 - -1.9 5,098,550 - -0.5 5,098,552 + -1.5 5,098,553 - +0.3 5,098,560 + -0.5 5,098,580 + +0.2 5,098,581 - -0.9 5,098,660 - +0.0 5,098,679 + -0.9 5,098,680 - -0.2 5,098,697 - -0.0 5,098,697 - +1.4 5,098,701 + -0.7 5,098,702 - -1.3 5,098,782 - -1.2 5,098,826 - -0.2 5,098,919 - Echvi_4251 0.18 +0.9 5,098,998 + Echvi_4251 0.29 -1.3 5,098,999 - Echvi_4251 0.29 +0.5 5,098,999 - Echvi_4251 0.29 +0.5 5,098,999 - Echvi_4251 0.29 -0.2 5,098,999 - Echvi_4251 0.29 -0.1 5,099,034 - Echvi_4251 0.34 -2.8 5,099,063 + Echvi_4251 0.38 +0.3 5,099,063 + Echvi_4251 0.38 -0.1 5,099,064 - Echvi_4251 0.39 -0.8 5,099,068 + Echvi_4251 0.39 +1.1 5,099,068 + Echvi_4251 0.39 -2.0 5,099,081 - Echvi_4251 0.41 +0.6 5,099,147 + Echvi_4251 0.50 -2.2 5,099,147 + Echvi_4251 0.50 +0.8 5,099,147 + Echvi_4251 0.50 -0.2 5,099,148 - Echvi_4251 0.51 -0.3 5,099,148 - Echvi_4251 0.51 +1.0 5,099,148 - Echvi_4251 0.51 -1.0 5,099,237 + Echvi_4251 0.63 -2.3 5,099,270 + Echvi_4251 0.68 +1.1 5,099,270 + Echvi_4251 0.68 -1.7 5,099,271 - Echvi_4251 0.68 +1.1 5,099,272 + Echvi_4251 0.68 -0.0 5,099,272 + Echvi_4251 0.68 +0.2 5,099,273 - Echvi_4251 0.68 -0.9 5,099,273 - Echvi_4251 0.68 +2.2 5,099,273 - Echvi_4251 0.68 +0.7 5,099,340 + Echvi_4251 0.78 +0.8 5,099,341 - Echvi_4251 0.78 +0.7 5,099,424 - +1.1 5,099,424 - +0.2 5,099,481 - -1.3 5,099,519 + +0.4 5,099,519 + -0.9 5,099,525 - -1.0 5,099,543 + +0.2 5,099,544 - +0.3 5,099,546 - +0.1 5,099,697 - +1.2 5,099,700 + +0.7 5,099,700 + -0.8 5,099,700 + -0.3 5,099,701 - +0.2 5,099,790 - +1.6 5,099,809 - -1.7 5,099,890 - -0.7 5,099,926 - -1.5 5,100,021 + -0.3 5,100,021 + -0.2 5,100,022 - -0.2 5,100,022 - +0.6 5,100,087 + +0.2 5,100,141 + -0.8 5,100,155 + -2.2 5,100,201 - -0.0 5,100,333 + +0.7 5,100,358 + +0.8 5,100,358 + -1.2 5,100,376 - -1.8 5,100,376 - -0.4 5,100,445 - +1.6
Or see this region's nucleotide sequence