Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3910

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3909 and Echvi_3910 are separated by 165 nucleotidesEchvi_3910 and Echvi_3911 are separated by 32 nucleotides Echvi_3909: Echvi_3909 - Fucose permease, at 4,672,657 to 4,674,066 _3909 Echvi_3910: Echvi_3910 - Transcriptional regulator/sugar kinase, at 4,674,232 to 4,675,131 _3910 Echvi_3911: Echvi_3911 - alpha-1,2-mannosidase, putative, at 4,675,164 to 4,677,458 _3911 Position (kb) 4674 4675 4676Strain fitness (log2 ratio) -2 -1 0 1 2at 4673.287 kb on - strand, within Echvi_3909at 4673.315 kb on + strand, within Echvi_3909at 4673.325 kb on + strand, within Echvi_3909at 4673.326 kb on - strand, within Echvi_3909at 4673.326 kb on - strand, within Echvi_3909at 4673.326 kb on - strand, within Echvi_3909at 4673.326 kb on - strand, within Echvi_3909at 4673.326 kb on - strand, within Echvi_3909at 4673.326 kb on - strand, within Echvi_3909at 4673.461 kb on + strand, within Echvi_3909at 4673.462 kb on - strand, within Echvi_3909at 4673.465 kb on + strand, within Echvi_3909at 4673.465 kb on + strand, within Echvi_3909at 4673.466 kb on - strand, within Echvi_3909at 4673.466 kb on - strand, within Echvi_3909at 4673.466 kb on - strand, within Echvi_3909at 4673.507 kb on - strand, within Echvi_3909at 4673.525 kb on + strand, within Echvi_3909at 4673.526 kb on - strand, within Echvi_3909at 4673.534 kb on - strand, within Echvi_3909at 4673.566 kb on - strand, within Echvi_3909at 4673.627 kb on + strand, within Echvi_3909at 4673.656 kb on - strand, within Echvi_3909at 4673.825 kb on + strand, within Echvi_3909at 4673.825 kb on + strand, within Echvi_3909at 4673.826 kb on - strand, within Echvi_3909at 4673.849 kb on + strand, within Echvi_3909at 4673.849 kb on + strand, within Echvi_3909at 4673.897 kb on - strand, within Echvi_3909at 4673.905 kb on + strand, within Echvi_3909at 4673.905 kb on + strand, within Echvi_3909at 4673.905 kb on + strand, within Echvi_3909at 4673.906 kb on - strand, within Echvi_3909at 4673.926 kb on + strandat 4673.962 kb on - strandat 4673.976 kb on + strandat 4674.054 kb on + strandat 4674.054 kb on + strandat 4674.055 kb on - strandat 4674.072 kb on + strandat 4674.072 kb on + strandat 4674.073 kb on - strandat 4674.075 kb on + strandat 4674.075 kb on + strandat 4674.076 kb on - strandat 4674.080 kb on + strandat 4674.094 kb on + strandat 4674.112 kb on + strandat 4674.113 kb on - strandat 4674.120 kb on - strandat 4674.131 kb on - strandat 4674.133 kb on + strandat 4674.507 kb on - strand, within Echvi_3910at 4674.507 kb on - strand, within Echvi_3910at 4674.550 kb on - strand, within Echvi_3910at 4674.550 kb on - strand, within Echvi_3910at 4674.552 kb on + strand, within Echvi_3910at 4674.552 kb on + strand, within Echvi_3910at 4674.553 kb on - strand, within Echvi_3910at 4674.575 kb on + strand, within Echvi_3910at 4674.575 kb on + strand, within Echvi_3910at 4674.575 kb on + strand, within Echvi_3910at 4674.576 kb on - strand, within Echvi_3910at 4674.618 kb on + strand, within Echvi_3910at 4674.618 kb on + strand, within Echvi_3910at 4674.643 kb on + strand, within Echvi_3910at 4674.644 kb on - strand, within Echvi_3910at 4674.760 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.850 kb on + strand, within Echvi_3910at 4674.851 kb on - strand, within Echvi_3910at 4674.851 kb on - strand, within Echvi_3910at 4674.851 kb on - strand, within Echvi_3910at 4674.851 kb on - strand, within Echvi_3910at 4674.860 kb on + strand, within Echvi_3910at 4675.033 kb on + strand, within Echvi_3910at 4675.034 kb on - strand, within Echvi_3910at 4675.034 kb on - strand, within Echvi_3910at 4675.085 kb on - strandat 4675.085 kb on - strandat 4675.085 kb on - strandat 4675.086 kb on + strandat 4675.087 kb on - strandat 4675.087 kb on - strandat 4675.087 kb on - strandat 4675.087 kb on - strandat 4675.087 kb on - strandat 4675.087 kb on - strandat 4675.105 kb on + strandat 4675.111 kb on + strandat 4675.114 kb on + strandat 4675.114 kb on + strandat 4675.119 kb on + strandat 4675.133 kb on + strandat 4675.133 kb on + strandat 4675.133 kb on + strandat 4675.134 kb on - strandat 4675.134 kb on - strandat 4675.206 kb on - strandat 4675.315 kb on - strandat 4675.328 kb on - strandat 4675.426 kb on + strand, within Echvi_3911at 4675.427 kb on - strand, within Echvi_3911at 4675.446 kb on + strand, within Echvi_3911at 4675.453 kb on + strand, within Echvi_3911at 4675.453 kb on + strand, within Echvi_3911at 4675.477 kb on + strand, within Echvi_3911at 4675.530 kb on - strand, within Echvi_3911at 4675.537 kb on + strand, within Echvi_3911at 4675.537 kb on + strand, within Echvi_3911at 4675.537 kb on + strand, within Echvi_3911at 4675.537 kb on + strand, within Echvi_3911at 4675.538 kb on - strand, within Echvi_3911at 4675.538 kb on - strand, within Echvi_3911at 4675.538 kb on - strand, within Echvi_3911at 4675.607 kb on - strand, within Echvi_3911at 4675.607 kb on - strand, within Echvi_3911at 4675.642 kb on + strand, within Echvi_3911at 4675.642 kb on + strand, within Echvi_3911at 4675.643 kb on - strand, within Echvi_3911at 4675.643 kb on - strand, within Echvi_3911at 4675.696 kb on + strand, within Echvi_3911at 4675.696 kb on + strand, within Echvi_3911at 4675.696 kb on + strand, within Echvi_3911at 4675.696 kb on + strand, within Echvi_3911at 4675.699 kb on + strand, within Echvi_3911at 4675.699 kb on + strand, within Echvi_3911at 4675.699 kb on + strand, within Echvi_3911at 4675.699 kb on + strand, within Echvi_3911at 4675.699 kb on + strand, within Echvi_3911at 4675.700 kb on - strand, within Echvi_3911at 4675.749 kb on + strand, within Echvi_3911at 4675.814 kb on + strand, within Echvi_3911at 4675.814 kb on + strand, within Echvi_3911at 4675.814 kb on + strand, within Echvi_3911at 4675.814 kb on + strand, within Echvi_3911at 4675.814 kb on + strand, within Echvi_3911at 4675.816 kb on + strand, within Echvi_3911at 4675.826 kb on + strand, within Echvi_3911at 4675.826 kb on + strand, within Echvi_3911at 4675.827 kb on - strand, within Echvi_3911at 4675.866 kb on - strand, within Echvi_3911at 4675.877 kb on + strand, within Echvi_3911at 4675.877 kb on + strand, within Echvi_3911at 4675.937 kb on + strand, within Echvi_3911at 4675.937 kb on + strand, within Echvi_3911at 4675.937 kb on + strand, within Echvi_3911at 4675.939 kb on + strand, within Echvi_3911at 4675.940 kb on - strand, within Echvi_3911at 4675.960 kb on + strand, within Echvi_3911at 4675.968 kb on + strand, within Echvi_3911at 4676.008 kb on + strand, within Echvi_3911at 4676.026 kb on + strand, within Echvi_3911at 4676.027 kb on - strand, within Echvi_3911at 4676.032 kb on + strand, within Echvi_3911at 4676.032 kb on + strand, within Echvi_3911at 4676.033 kb on - strand, within Echvi_3911at 4676.033 kb on - strand, within Echvi_3911at 4676.098 kb on + strand, within Echvi_3911at 4676.098 kb on + strand, within Echvi_3911at 4676.098 kb on + strand, within Echvi_3911at 4676.098 kb on + strand, within Echvi_3911at 4676.099 kb on - strand, within Echvi_3911at 4676.099 kb on - strand, within Echvi_3911at 4676.099 kb on - strand, within Echvi_3911at 4676.101 kb on + strand, within Echvi_3911at 4676.101 kb on + strand, within Echvi_3911at 4676.101 kb on + strand, within Echvi_3911at 4676.101 kb on + strand, within Echvi_3911at 4676.101 kb on + strand, within Echvi_3911

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,673,287 - Echvi_3909 0.45 +0.3
4,673,315 + Echvi_3909 0.47 -0.1
4,673,325 + Echvi_3909 0.47 +1.0
4,673,326 - Echvi_3909 0.47 -0.7
4,673,326 - Echvi_3909 0.47 +1.5
4,673,326 - Echvi_3909 0.47 +0.2
4,673,326 - Echvi_3909 0.47 -0.2
4,673,326 - Echvi_3909 0.47 -0.6
4,673,326 - Echvi_3909 0.47 +0.5
4,673,461 + Echvi_3909 0.57 -2.6
4,673,462 - Echvi_3909 0.57 -1.5
4,673,465 + Echvi_3909 0.57 +2.1
4,673,465 + Echvi_3909 0.57 +0.6
4,673,466 - Echvi_3909 0.57 -0.5
4,673,466 - Echvi_3909 0.57 +0.0
4,673,466 - Echvi_3909 0.57 -2.5
4,673,507 - Echvi_3909 0.60 +0.4
4,673,525 + Echvi_3909 0.62 -0.3
4,673,526 - Echvi_3909 0.62 +1.4
4,673,534 - Echvi_3909 0.62 -0.6
4,673,566 - Echvi_3909 0.64 +1.7
4,673,627 + Echvi_3909 0.69 -0.4
4,673,656 - Echvi_3909 0.71 -0.5
4,673,825 + Echvi_3909 0.83 -0.5
4,673,825 + Echvi_3909 0.83 -0.4
4,673,826 - Echvi_3909 0.83 +0.2
4,673,849 + Echvi_3909 0.85 +0.1
4,673,849 + Echvi_3909 0.85 -0.7
4,673,897 - Echvi_3909 0.88 +0.0
4,673,905 + Echvi_3909 0.89 -2.4
4,673,905 + Echvi_3909 0.89 +2.5
4,673,905 + Echvi_3909 0.89 -0.8
4,673,906 - Echvi_3909 0.89 +0.5
4,673,926 + -0.2
4,673,962 - +0.1
4,673,976 + +0.5
4,674,054 + -0.5
4,674,054 + +1.3
4,674,055 - -1.1
4,674,072 + +1.8
4,674,072 + +0.9
4,674,073 - +0.1
4,674,075 + +0.1
4,674,075 + +1.0
4,674,076 - +0.8
4,674,080 + -0.5
4,674,094 + -0.4
4,674,112 + -2.1
4,674,113 - +0.9
4,674,120 - +1.2
4,674,131 - +1.0
4,674,133 + -0.1
4,674,507 - Echvi_3910 0.31 +1.4
4,674,507 - Echvi_3910 0.31 +1.2
4,674,550 - Echvi_3910 0.35 +1.6
4,674,550 - Echvi_3910 0.35 +0.6
4,674,552 + Echvi_3910 0.36 +1.5
4,674,552 + Echvi_3910 0.36 -1.6
4,674,553 - Echvi_3910 0.36 -0.6
4,674,575 + Echvi_3910 0.38 +1.8
4,674,575 + Echvi_3910 0.38 +1.1
4,674,575 + Echvi_3910 0.38 +1.2
4,674,576 - Echvi_3910 0.38 +1.3
4,674,618 + Echvi_3910 0.43 -1.9
4,674,618 + Echvi_3910 0.43 +0.1
4,674,643 + Echvi_3910 0.46 +1.8
4,674,644 - Echvi_3910 0.46 +0.9
4,674,760 + Echvi_3910 0.59 +1.3
4,674,850 + Echvi_3910 0.69 +1.4
4,674,850 + Echvi_3910 0.69 +0.8
4,674,850 + Echvi_3910 0.69 +2.0
4,674,850 + Echvi_3910 0.69 +0.2
4,674,850 + Echvi_3910 0.69 -2.4
4,674,850 + Echvi_3910 0.69 +1.2
4,674,850 + Echvi_3910 0.69 +0.9
4,674,850 + Echvi_3910 0.69 +1.0
4,674,850 + Echvi_3910 0.69 +0.3
4,674,850 + Echvi_3910 0.69 +1.5
4,674,851 - Echvi_3910 0.69 +1.1
4,674,851 - Echvi_3910 0.69 +0.9
4,674,851 - Echvi_3910 0.69 +2.1
4,674,851 - Echvi_3910 0.69 +1.4
4,674,860 + Echvi_3910 0.70 +1.1
4,675,033 + Echvi_3910 0.89 +1.4
4,675,034 - Echvi_3910 0.89 +0.4
4,675,034 - Echvi_3910 0.89 -1.7
4,675,085 - +1.0
4,675,085 - +1.3
4,675,085 - +1.5
4,675,086 + +0.9
4,675,087 - +1.3
4,675,087 - +1.6
4,675,087 - +1.1
4,675,087 - +2.0
4,675,087 - +0.7
4,675,087 - +0.8
4,675,105 + +0.5
4,675,111 + -0.0
4,675,114 + +0.6
4,675,114 + -0.3
4,675,119 + +1.1
4,675,133 + +0.1
4,675,133 + +1.6
4,675,133 + +1.4
4,675,134 - +0.8
4,675,134 - +0.4
4,675,206 - +0.6
4,675,315 - +1.4
4,675,328 - +0.6
4,675,426 + Echvi_3911 0.11 +0.7
4,675,427 - Echvi_3911 0.11 -0.9
4,675,446 + Echvi_3911 0.12 -0.3
4,675,453 + Echvi_3911 0.13 +1.3
4,675,453 + Echvi_3911 0.13 +0.6
4,675,477 + Echvi_3911 0.14 +0.1
4,675,530 - Echvi_3911 0.16 -0.9
4,675,537 + Echvi_3911 0.16 +1.4
4,675,537 + Echvi_3911 0.16 +0.6
4,675,537 + Echvi_3911 0.16 +0.6
4,675,537 + Echvi_3911 0.16 +0.5
4,675,538 - Echvi_3911 0.16 +1.4
4,675,538 - Echvi_3911 0.16 +0.2
4,675,538 - Echvi_3911 0.16 +0.8
4,675,607 - Echvi_3911 0.19 +1.0
4,675,607 - Echvi_3911 0.19 +0.2
4,675,642 + Echvi_3911 0.21 +0.8
4,675,642 + Echvi_3911 0.21 +1.0
4,675,643 - Echvi_3911 0.21 -2.1
4,675,643 - Echvi_3911 0.21 +0.8
4,675,696 + Echvi_3911 0.23 +0.9
4,675,696 + Echvi_3911 0.23 +1.1
4,675,696 + Echvi_3911 0.23 +1.2
4,675,696 + Echvi_3911 0.23 +1.6
4,675,699 + Echvi_3911 0.23 -0.1
4,675,699 + Echvi_3911 0.23 +0.4
4,675,699 + Echvi_3911 0.23 +1.0
4,675,699 + Echvi_3911 0.23 +1.4
4,675,699 + Echvi_3911 0.23 +0.7
4,675,700 - Echvi_3911 0.23 +1.3
4,675,749 + Echvi_3911 0.25 -0.0
4,675,814 + Echvi_3911 0.28 +0.9
4,675,814 + Echvi_3911 0.28 +0.8
4,675,814 + Echvi_3911 0.28 +1.9
4,675,814 + Echvi_3911 0.28 +2.1
4,675,814 + Echvi_3911 0.28 +0.7
4,675,816 + Echvi_3911 0.28 +1.2
4,675,826 + Echvi_3911 0.29 -0.1
4,675,826 + Echvi_3911 0.29 -0.8
4,675,827 - Echvi_3911 0.29 -0.2
4,675,866 - Echvi_3911 0.31 -0.4
4,675,877 + Echvi_3911 0.31 +0.3
4,675,877 + Echvi_3911 0.31 +0.5
4,675,937 + Echvi_3911 0.34 +0.3
4,675,937 + Echvi_3911 0.34 +0.5
4,675,937 + Echvi_3911 0.34 +1.9
4,675,939 + Echvi_3911 0.34 -0.4
4,675,940 - Echvi_3911 0.34 -1.5
4,675,960 + Echvi_3911 0.35 +1.1
4,675,968 + Echvi_3911 0.35 +0.1
4,676,008 + Echvi_3911 0.37 +0.9
4,676,026 + Echvi_3911 0.38 +1.4
4,676,027 - Echvi_3911 0.38 +0.1
4,676,032 + Echvi_3911 0.38 +1.4
4,676,032 + Echvi_3911 0.38 +2.1
4,676,033 - Echvi_3911 0.38 +1.7
4,676,033 - Echvi_3911 0.38 -0.1
4,676,098 + Echvi_3911 0.41 +1.5
4,676,098 + Echvi_3911 0.41 +0.5
4,676,098 + Echvi_3911 0.41 +1.9
4,676,098 + Echvi_3911 0.41 +0.6
4,676,099 - Echvi_3911 0.41 -1.0
4,676,099 - Echvi_3911 0.41 +0.8
4,676,099 - Echvi_3911 0.41 +0.5
4,676,101 + Echvi_3911 0.41 -0.6
4,676,101 + Echvi_3911 0.41 +0.5
4,676,101 + Echvi_3911 0.41 -0.2
4,676,101 + Echvi_3911 0.41 +0.4
4,676,101 + Echvi_3911 0.41 +0.2

Or see this region's nucleotide sequence