Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3909 and Echvi_3910 are separated by 165 nucleotides Echvi_3910 and Echvi_3911 are separated by 32 nucleotides
Echvi_3909: Echvi_3909 - Fucose permease, at 4,672,657 to 4,674,066
_3909
Echvi_3910: Echvi_3910 - Transcriptional regulator/sugar kinase, at 4,674,232 to 4,675,131
_3910
Echvi_3911: Echvi_3911 - alpha-1,2-mannosidase, putative, at 4,675,164 to 4,677,458
_3911
Position (kb)
4674
4675
4676 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4673.287 kb on - strand, within Echvi_3909 at 4673.315 kb on + strand, within Echvi_3909 at 4673.325 kb on + strand, within Echvi_3909 at 4673.326 kb on - strand, within Echvi_3909 at 4673.326 kb on - strand, within Echvi_3909 at 4673.326 kb on - strand, within Echvi_3909 at 4673.326 kb on - strand, within Echvi_3909 at 4673.326 kb on - strand, within Echvi_3909 at 4673.326 kb on - strand, within Echvi_3909 at 4673.461 kb on + strand, within Echvi_3909 at 4673.462 kb on - strand, within Echvi_3909 at 4673.465 kb on + strand, within Echvi_3909 at 4673.465 kb on + strand, within Echvi_3909 at 4673.466 kb on - strand, within Echvi_3909 at 4673.466 kb on - strand, within Echvi_3909 at 4673.466 kb on - strand, within Echvi_3909 at 4673.507 kb on - strand, within Echvi_3909 at 4673.525 kb on + strand, within Echvi_3909 at 4673.526 kb on - strand, within Echvi_3909 at 4673.534 kb on - strand, within Echvi_3909 at 4673.566 kb on - strand, within Echvi_3909 at 4673.627 kb on + strand, within Echvi_3909 at 4673.656 kb on - strand, within Echvi_3909 at 4673.825 kb on + strand, within Echvi_3909 at 4673.825 kb on + strand, within Echvi_3909 at 4673.826 kb on - strand, within Echvi_3909 at 4673.849 kb on + strand, within Echvi_3909 at 4673.849 kb on + strand, within Echvi_3909 at 4673.897 kb on - strand, within Echvi_3909 at 4673.905 kb on + strand, within Echvi_3909 at 4673.905 kb on + strand, within Echvi_3909 at 4673.905 kb on + strand, within Echvi_3909 at 4673.906 kb on - strand, within Echvi_3909 at 4673.926 kb on + strand at 4673.962 kb on - strand at 4673.976 kb on + strand at 4674.054 kb on + strand at 4674.054 kb on + strand at 4674.055 kb on - strand at 4674.072 kb on + strand at 4674.072 kb on + strand at 4674.073 kb on - strand at 4674.075 kb on + strand at 4674.075 kb on + strand at 4674.076 kb on - strand at 4674.080 kb on + strand at 4674.094 kb on + strand at 4674.112 kb on + strand at 4674.113 kb on - strand at 4674.120 kb on - strand at 4674.131 kb on - strand at 4674.133 kb on + strand at 4674.507 kb on - strand, within Echvi_3910 at 4674.507 kb on - strand, within Echvi_3910 at 4674.550 kb on - strand, within Echvi_3910 at 4674.550 kb on - strand, within Echvi_3910 at 4674.552 kb on + strand, within Echvi_3910 at 4674.552 kb on + strand, within Echvi_3910 at 4674.553 kb on - strand, within Echvi_3910 at 4674.575 kb on + strand, within Echvi_3910 at 4674.575 kb on + strand, within Echvi_3910 at 4674.575 kb on + strand, within Echvi_3910 at 4674.576 kb on - strand, within Echvi_3910 at 4674.618 kb on + strand, within Echvi_3910 at 4674.618 kb on + strand, within Echvi_3910 at 4674.643 kb on + strand, within Echvi_3910 at 4674.644 kb on - strand, within Echvi_3910 at 4674.760 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.850 kb on + strand, within Echvi_3910 at 4674.851 kb on - strand, within Echvi_3910 at 4674.851 kb on - strand, within Echvi_3910 at 4674.851 kb on - strand, within Echvi_3910 at 4674.851 kb on - strand, within Echvi_3910 at 4674.860 kb on + strand, within Echvi_3910 at 4675.033 kb on + strand, within Echvi_3910 at 4675.034 kb on - strand, within Echvi_3910 at 4675.034 kb on - strand, within Echvi_3910 at 4675.085 kb on - strand at 4675.085 kb on - strand at 4675.085 kb on - strand at 4675.086 kb on + strand at 4675.087 kb on - strand at 4675.087 kb on - strand at 4675.087 kb on - strand at 4675.087 kb on - strand at 4675.087 kb on - strand at 4675.087 kb on - strand at 4675.105 kb on + strand at 4675.111 kb on + strand at 4675.114 kb on + strand at 4675.114 kb on + strand at 4675.119 kb on + strand at 4675.133 kb on + strand at 4675.133 kb on + strand at 4675.133 kb on + strand at 4675.134 kb on - strand at 4675.134 kb on - strand at 4675.206 kb on - strand at 4675.315 kb on - strand at 4675.328 kb on - strand at 4675.426 kb on + strand, within Echvi_3911 at 4675.427 kb on - strand, within Echvi_3911 at 4675.446 kb on + strand, within Echvi_3911 at 4675.453 kb on + strand, within Echvi_3911 at 4675.453 kb on + strand, within Echvi_3911 at 4675.477 kb on + strand, within Echvi_3911 at 4675.530 kb on - strand, within Echvi_3911 at 4675.537 kb on + strand, within Echvi_3911 at 4675.537 kb on + strand, within Echvi_3911 at 4675.537 kb on + strand, within Echvi_3911 at 4675.537 kb on + strand, within Echvi_3911 at 4675.538 kb on - strand, within Echvi_3911 at 4675.538 kb on - strand, within Echvi_3911 at 4675.538 kb on - strand, within Echvi_3911 at 4675.607 kb on - strand, within Echvi_3911 at 4675.607 kb on - strand, within Echvi_3911 at 4675.642 kb on + strand, within Echvi_3911 at 4675.642 kb on + strand, within Echvi_3911 at 4675.643 kb on - strand, within Echvi_3911 at 4675.643 kb on - strand, within Echvi_3911 at 4675.696 kb on + strand, within Echvi_3911 at 4675.696 kb on + strand, within Echvi_3911 at 4675.696 kb on + strand, within Echvi_3911 at 4675.696 kb on + strand, within Echvi_3911 at 4675.699 kb on + strand, within Echvi_3911 at 4675.699 kb on + strand, within Echvi_3911 at 4675.699 kb on + strand, within Echvi_3911 at 4675.699 kb on + strand, within Echvi_3911 at 4675.699 kb on + strand, within Echvi_3911 at 4675.700 kb on - strand, within Echvi_3911 at 4675.749 kb on + strand, within Echvi_3911 at 4675.814 kb on + strand, within Echvi_3911 at 4675.814 kb on + strand, within Echvi_3911 at 4675.814 kb on + strand, within Echvi_3911 at 4675.814 kb on + strand, within Echvi_3911 at 4675.814 kb on + strand, within Echvi_3911 at 4675.816 kb on + strand, within Echvi_3911 at 4675.826 kb on + strand, within Echvi_3911 at 4675.826 kb on + strand, within Echvi_3911 at 4675.827 kb on - strand, within Echvi_3911 at 4675.866 kb on - strand, within Echvi_3911 at 4675.877 kb on + strand, within Echvi_3911 at 4675.877 kb on + strand, within Echvi_3911 at 4675.937 kb on + strand, within Echvi_3911 at 4675.937 kb on + strand, within Echvi_3911 at 4675.937 kb on + strand, within Echvi_3911 at 4675.939 kb on + strand, within Echvi_3911 at 4675.940 kb on - strand, within Echvi_3911 at 4675.960 kb on + strand, within Echvi_3911 at 4675.968 kb on + strand, within Echvi_3911 at 4676.008 kb on + strand, within Echvi_3911 at 4676.026 kb on + strand, within Echvi_3911 at 4676.027 kb on - strand, within Echvi_3911 at 4676.032 kb on + strand, within Echvi_3911 at 4676.032 kb on + strand, within Echvi_3911 at 4676.033 kb on - strand, within Echvi_3911 at 4676.033 kb on - strand, within Echvi_3911 at 4676.098 kb on + strand, within Echvi_3911 at 4676.098 kb on + strand, within Echvi_3911 at 4676.098 kb on + strand, within Echvi_3911 at 4676.098 kb on + strand, within Echvi_3911 at 4676.099 kb on - strand, within Echvi_3911 at 4676.099 kb on - strand, within Echvi_3911 at 4676.099 kb on - strand, within Echvi_3911 at 4676.101 kb on + strand, within Echvi_3911 at 4676.101 kb on + strand, within Echvi_3911 at 4676.101 kb on + strand, within Echvi_3911 at 4676.101 kb on + strand, within Echvi_3911 at 4676.101 kb on + strand, within Echvi_3911
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,673,287 - Echvi_3909 0.45 +0.3 4,673,315 + Echvi_3909 0.47 -0.1 4,673,325 + Echvi_3909 0.47 +1.0 4,673,326 - Echvi_3909 0.47 -0.7 4,673,326 - Echvi_3909 0.47 +1.5 4,673,326 - Echvi_3909 0.47 +0.2 4,673,326 - Echvi_3909 0.47 -0.2 4,673,326 - Echvi_3909 0.47 -0.6 4,673,326 - Echvi_3909 0.47 +0.5 4,673,461 + Echvi_3909 0.57 -2.6 4,673,462 - Echvi_3909 0.57 -1.5 4,673,465 + Echvi_3909 0.57 +2.1 4,673,465 + Echvi_3909 0.57 +0.6 4,673,466 - Echvi_3909 0.57 -0.5 4,673,466 - Echvi_3909 0.57 +0.0 4,673,466 - Echvi_3909 0.57 -2.5 4,673,507 - Echvi_3909 0.60 +0.4 4,673,525 + Echvi_3909 0.62 -0.3 4,673,526 - Echvi_3909 0.62 +1.4 4,673,534 - Echvi_3909 0.62 -0.6 4,673,566 - Echvi_3909 0.64 +1.7 4,673,627 + Echvi_3909 0.69 -0.4 4,673,656 - Echvi_3909 0.71 -0.5 4,673,825 + Echvi_3909 0.83 -0.5 4,673,825 + Echvi_3909 0.83 -0.4 4,673,826 - Echvi_3909 0.83 +0.2 4,673,849 + Echvi_3909 0.85 +0.1 4,673,849 + Echvi_3909 0.85 -0.7 4,673,897 - Echvi_3909 0.88 +0.0 4,673,905 + Echvi_3909 0.89 -2.4 4,673,905 + Echvi_3909 0.89 +2.5 4,673,905 + Echvi_3909 0.89 -0.8 4,673,906 - Echvi_3909 0.89 +0.5 4,673,926 + -0.2 4,673,962 - +0.1 4,673,976 + +0.5 4,674,054 + -0.5 4,674,054 + +1.3 4,674,055 - -1.1 4,674,072 + +1.8 4,674,072 + +0.9 4,674,073 - +0.1 4,674,075 + +0.1 4,674,075 + +1.0 4,674,076 - +0.8 4,674,080 + -0.5 4,674,094 + -0.4 4,674,112 + -2.1 4,674,113 - +0.9 4,674,120 - +1.2 4,674,131 - +1.0 4,674,133 + -0.1 4,674,507 - Echvi_3910 0.31 +1.4 4,674,507 - Echvi_3910 0.31 +1.2 4,674,550 - Echvi_3910 0.35 +1.6 4,674,550 - Echvi_3910 0.35 +0.6 4,674,552 + Echvi_3910 0.36 +1.5 4,674,552 + Echvi_3910 0.36 -1.6 4,674,553 - Echvi_3910 0.36 -0.6 4,674,575 + Echvi_3910 0.38 +1.8 4,674,575 + Echvi_3910 0.38 +1.1 4,674,575 + Echvi_3910 0.38 +1.2 4,674,576 - Echvi_3910 0.38 +1.3 4,674,618 + Echvi_3910 0.43 -1.9 4,674,618 + Echvi_3910 0.43 +0.1 4,674,643 + Echvi_3910 0.46 +1.8 4,674,644 - Echvi_3910 0.46 +0.9 4,674,760 + Echvi_3910 0.59 +1.3 4,674,850 + Echvi_3910 0.69 +1.4 4,674,850 + Echvi_3910 0.69 +0.8 4,674,850 + Echvi_3910 0.69 +2.0 4,674,850 + Echvi_3910 0.69 +0.2 4,674,850 + Echvi_3910 0.69 -2.4 4,674,850 + Echvi_3910 0.69 +1.2 4,674,850 + Echvi_3910 0.69 +0.9 4,674,850 + Echvi_3910 0.69 +1.0 4,674,850 + Echvi_3910 0.69 +0.3 4,674,850 + Echvi_3910 0.69 +1.5 4,674,851 - Echvi_3910 0.69 +1.1 4,674,851 - Echvi_3910 0.69 +0.9 4,674,851 - Echvi_3910 0.69 +2.1 4,674,851 - Echvi_3910 0.69 +1.4 4,674,860 + Echvi_3910 0.70 +1.1 4,675,033 + Echvi_3910 0.89 +1.4 4,675,034 - Echvi_3910 0.89 +0.4 4,675,034 - Echvi_3910 0.89 -1.7 4,675,085 - +1.0 4,675,085 - +1.3 4,675,085 - +1.5 4,675,086 + +0.9 4,675,087 - +1.3 4,675,087 - +1.6 4,675,087 - +1.1 4,675,087 - +2.0 4,675,087 - +0.7 4,675,087 - +0.8 4,675,105 + +0.5 4,675,111 + -0.0 4,675,114 + +0.6 4,675,114 + -0.3 4,675,119 + +1.1 4,675,133 + +0.1 4,675,133 + +1.6 4,675,133 + +1.4 4,675,134 - +0.8 4,675,134 - +0.4 4,675,206 - +0.6 4,675,315 - +1.4 4,675,328 - +0.6 4,675,426 + Echvi_3911 0.11 +0.7 4,675,427 - Echvi_3911 0.11 -0.9 4,675,446 + Echvi_3911 0.12 -0.3 4,675,453 + Echvi_3911 0.13 +1.3 4,675,453 + Echvi_3911 0.13 +0.6 4,675,477 + Echvi_3911 0.14 +0.1 4,675,530 - Echvi_3911 0.16 -0.9 4,675,537 + Echvi_3911 0.16 +1.4 4,675,537 + Echvi_3911 0.16 +0.6 4,675,537 + Echvi_3911 0.16 +0.6 4,675,537 + Echvi_3911 0.16 +0.5 4,675,538 - Echvi_3911 0.16 +1.4 4,675,538 - Echvi_3911 0.16 +0.2 4,675,538 - Echvi_3911 0.16 +0.8 4,675,607 - Echvi_3911 0.19 +1.0 4,675,607 - Echvi_3911 0.19 +0.2 4,675,642 + Echvi_3911 0.21 +0.8 4,675,642 + Echvi_3911 0.21 +1.0 4,675,643 - Echvi_3911 0.21 -2.1 4,675,643 - Echvi_3911 0.21 +0.8 4,675,696 + Echvi_3911 0.23 +0.9 4,675,696 + Echvi_3911 0.23 +1.1 4,675,696 + Echvi_3911 0.23 +1.2 4,675,696 + Echvi_3911 0.23 +1.6 4,675,699 + Echvi_3911 0.23 -0.1 4,675,699 + Echvi_3911 0.23 +0.4 4,675,699 + Echvi_3911 0.23 +1.0 4,675,699 + Echvi_3911 0.23 +1.4 4,675,699 + Echvi_3911 0.23 +0.7 4,675,700 - Echvi_3911 0.23 +1.3 4,675,749 + Echvi_3911 0.25 -0.0 4,675,814 + Echvi_3911 0.28 +0.9 4,675,814 + Echvi_3911 0.28 +0.8 4,675,814 + Echvi_3911 0.28 +1.9 4,675,814 + Echvi_3911 0.28 +2.1 4,675,814 + Echvi_3911 0.28 +0.7 4,675,816 + Echvi_3911 0.28 +1.2 4,675,826 + Echvi_3911 0.29 -0.1 4,675,826 + Echvi_3911 0.29 -0.8 4,675,827 - Echvi_3911 0.29 -0.2 4,675,866 - Echvi_3911 0.31 -0.4 4,675,877 + Echvi_3911 0.31 +0.3 4,675,877 + Echvi_3911 0.31 +0.5 4,675,937 + Echvi_3911 0.34 +0.3 4,675,937 + Echvi_3911 0.34 +0.5 4,675,937 + Echvi_3911 0.34 +1.9 4,675,939 + Echvi_3911 0.34 -0.4 4,675,940 - Echvi_3911 0.34 -1.5 4,675,960 + Echvi_3911 0.35 +1.1 4,675,968 + Echvi_3911 0.35 +0.1 4,676,008 + Echvi_3911 0.37 +0.9 4,676,026 + Echvi_3911 0.38 +1.4 4,676,027 - Echvi_3911 0.38 +0.1 4,676,032 + Echvi_3911 0.38 +1.4 4,676,032 + Echvi_3911 0.38 +2.1 4,676,033 - Echvi_3911 0.38 +1.7 4,676,033 - Echvi_3911 0.38 -0.1 4,676,098 + Echvi_3911 0.41 +1.5 4,676,098 + Echvi_3911 0.41 +0.5 4,676,098 + Echvi_3911 0.41 +1.9 4,676,098 + Echvi_3911 0.41 +0.6 4,676,099 - Echvi_3911 0.41 -1.0 4,676,099 - Echvi_3911 0.41 +0.8 4,676,099 - Echvi_3911 0.41 +0.5 4,676,101 + Echvi_3911 0.41 -0.6 4,676,101 + Echvi_3911 0.41 +0.5 4,676,101 + Echvi_3911 0.41 -0.2 4,676,101 + Echvi_3911 0.41 +0.4 4,676,101 + Echvi_3911 0.41 +0.2
Or see this region's nucleotide sequence