Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3158

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_3157 and Echvi_3158 are separated by 11 nucleotidesEchvi_3158 and Echvi_3159 are separated by 11 nucleotides Echvi_3157: Echvi_3157 - glyceraldehyde-3-phosphate dehydrogenase, type II, at 3,763,336 to 3,764,349 _3157 Echvi_3158: Echvi_3158 - DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes, at 3,764,361 to 3,765,422 _3158 Echvi_3159: Echvi_3159 - Na+/H+-dicarboxylate symporters, at 3,765,434 to 3,766,782 _3159 Position (kb) 3764 3765 3766Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3763.435 kb on - strandat 3763.467 kb on - strand, within Echvi_3157at 3763.477 kb on + strand, within Echvi_3157at 3763.478 kb on - strand, within Echvi_3157at 3763.478 kb on - strand, within Echvi_3157at 3763.478 kb on - strand, within Echvi_3157at 3763.486 kb on + strand, within Echvi_3157at 3763.487 kb on - strand, within Echvi_3157at 3763.487 kb on - strand, within Echvi_3157at 3763.516 kb on - strand, within Echvi_3157at 3763.551 kb on - strand, within Echvi_3157at 3763.591 kb on - strand, within Echvi_3157at 3763.591 kb on - strand, within Echvi_3157at 3763.591 kb on - strand, within Echvi_3157at 3763.627 kb on + strand, within Echvi_3157at 3763.628 kb on - strand, within Echvi_3157at 3763.628 kb on - strand, within Echvi_3157at 3763.656 kb on - strand, within Echvi_3157at 3763.755 kb on + strand, within Echvi_3157at 3763.758 kb on + strand, within Echvi_3157at 3763.758 kb on + strand, within Echvi_3157at 3763.759 kb on - strand, within Echvi_3157at 3763.759 kb on - strand, within Echvi_3157at 3763.761 kb on + strand, within Echvi_3157at 3763.761 kb on + strand, within Echvi_3157at 3763.762 kb on - strand, within Echvi_3157at 3763.762 kb on - strand, within Echvi_3157at 3763.762 kb on - strand, within Echvi_3157at 3763.791 kb on - strand, within Echvi_3157at 3763.824 kb on + strand, within Echvi_3157at 3763.833 kb on - strand, within Echvi_3157at 3763.842 kb on + strand, within Echvi_3157at 3763.843 kb on - strand, within Echvi_3157at 3763.866 kb on - strand, within Echvi_3157at 3763.866 kb on - strand, within Echvi_3157at 3763.872 kb on + strand, within Echvi_3157at 3763.875 kb on + strand, within Echvi_3157at 3763.876 kb on - strand, within Echvi_3157at 3763.881 kb on + strand, within Echvi_3157at 3763.996 kb on - strand, within Echvi_3157at 3764.046 kb on - strand, within Echvi_3157at 3764.074 kb on - strand, within Echvi_3157at 3764.089 kb on + strand, within Echvi_3157at 3764.138 kb on - strand, within Echvi_3157at 3764.160 kb on + strand, within Echvi_3157at 3764.160 kb on + strand, within Echvi_3157at 3764.161 kb on - strand, within Echvi_3157at 3764.161 kb on - strand, within Echvi_3157at 3764.161 kb on - strand, within Echvi_3157at 3764.164 kb on + strand, within Echvi_3157at 3764.164 kb on + strand, within Echvi_3157at 3764.164 kb on + strand, within Echvi_3157at 3764.164 kb on + strand, within Echvi_3157at 3764.165 kb on - strand, within Echvi_3157at 3764.165 kb on - strand, within Echvi_3157at 3764.188 kb on - strand, within Echvi_3157at 3764.188 kb on - strand, within Echvi_3157at 3764.224 kb on + strand, within Echvi_3157at 3764.224 kb on + strand, within Echvi_3157at 3764.225 kb on - strand, within Echvi_3157at 3764.225 kb on - strand, within Echvi_3157at 3764.225 kb on - strand, within Echvi_3157at 3764.225 kb on - strand, within Echvi_3157at 3764.229 kb on - strand, within Echvi_3157at 3764.244 kb on + strand, within Echvi_3157at 3764.244 kb on + strand, within Echvi_3157at 3764.245 kb on - strand, within Echvi_3157at 3764.250 kb on + strandat 3764.265 kb on - strandat 3764.265 kb on - strandat 3764.272 kb on - strandat 3764.344 kb on + strandat 3764.344 kb on + strandat 3764.351 kb on + strandat 3764.355 kb on - strandat 3764.379 kb on - strandat 3764.380 kb on + strandat 3764.380 kb on + strandat 3764.381 kb on - strandat 3764.381 kb on - strandat 3764.413 kb on - strandat 3764.413 kb on - strandat 3764.441 kb on + strandat 3764.471 kb on + strand, within Echvi_3158at 3764.474 kb on + strand, within Echvi_3158at 3764.476 kb on + strand, within Echvi_3158at 3764.476 kb on + strand, within Echvi_3158at 3764.477 kb on - strand, within Echvi_3158at 3764.477 kb on - strand, within Echvi_3158at 3764.477 kb on - strand, within Echvi_3158at 3764.477 kb on - strand, within Echvi_3158at 3764.477 kb on - strand, within Echvi_3158at 3764.480 kb on + strand, within Echvi_3158at 3764.480 kb on + strand, within Echvi_3158at 3764.481 kb on - strand, within Echvi_3158at 3764.538 kb on + strand, within Echvi_3158at 3764.538 kb on + strand, within Echvi_3158at 3764.572 kb on + strand, within Echvi_3158at 3764.572 kb on + strand, within Echvi_3158at 3764.572 kb on + strand, within Echvi_3158at 3764.573 kb on - strand, within Echvi_3158at 3764.573 kb on - strand, within Echvi_3158at 3764.573 kb on - strand, within Echvi_3158at 3764.573 kb on - strand, within Echvi_3158at 3764.576 kb on + strand, within Echvi_3158at 3764.576 kb on + strand, within Echvi_3158at 3764.616 kb on + strand, within Echvi_3158at 3764.663 kb on - strand, within Echvi_3158at 3764.687 kb on + strand, within Echvi_3158at 3764.687 kb on + strand, within Echvi_3158at 3764.745 kb on - strand, within Echvi_3158at 3764.774 kb on + strand, within Echvi_3158at 3764.775 kb on - strand, within Echvi_3158at 3764.795 kb on + strand, within Echvi_3158at 3764.798 kb on + strand, within Echvi_3158at 3764.914 kb on + strand, within Echvi_3158at 3764.915 kb on - strand, within Echvi_3158at 3764.915 kb on - strand, within Echvi_3158at 3764.970 kb on + strand, within Echvi_3158at 3764.971 kb on - strand, within Echvi_3158at 3765.030 kb on - strand, within Echvi_3158at 3765.059 kb on + strand, within Echvi_3158at 3765.060 kb on - strand, within Echvi_3158at 3765.078 kb on - strand, within Echvi_3158at 3765.089 kb on - strand, within Echvi_3158at 3765.132 kb on + strand, within Echvi_3158at 3765.133 kb on - strand, within Echvi_3158at 3765.147 kb on + strand, within Echvi_3158at 3765.175 kb on + strand, within Echvi_3158at 3765.176 kb on - strand, within Echvi_3158at 3765.207 kb on + strand, within Echvi_3158at 3765.208 kb on - strand, within Echvi_3158at 3765.208 kb on - strand, within Echvi_3158at 3765.208 kb on - strand, within Echvi_3158at 3765.228 kb on - strand, within Echvi_3158at 3765.228 kb on - strand, within Echvi_3158at 3765.322 kb on + strandat 3765.373 kb on + strandat 3765.374 kb on - strandat 3765.394 kb on - strandat 3765.414 kb on - strandat 3765.421 kb on - strandat 3765.459 kb on + strandat 3765.469 kb on + strandat 3765.484 kb on + strandat 3765.516 kb on + strandat 3765.534 kb on + strandat 3765.535 kb on - strandat 3765.535 kb on - strandat 3765.555 kb on + strandat 3765.556 kb on - strandat 3765.633 kb on + strand, within Echvi_3159at 3765.704 kb on - strand, within Echvi_3159at 3765.749 kb on + strand, within Echvi_3159at 3765.768 kb on + strand, within Echvi_3159at 3765.768 kb on + strand, within Echvi_3159at 3765.792 kb on + strand, within Echvi_3159at 3765.792 kb on + strand, within Echvi_3159at 3765.796 kb on - strand, within Echvi_3159at 3765.840 kb on + strand, within Echvi_3159at 3765.955 kb on + strand, within Echvi_3159at 3765.956 kb on - strand, within Echvi_3159at 3765.956 kb on - strand, within Echvi_3159at 3765.956 kb on - strand, within Echvi_3159at 3765.960 kb on + strand, within Echvi_3159at 3765.961 kb on - strand, within Echvi_3159at 3765.961 kb on - strand, within Echvi_3159at 3765.961 kb on - strand, within Echvi_3159at 3765.961 kb on - strand, within Echvi_3159at 3765.980 kb on - strand, within Echvi_3159at 3765.980 kb on - strand, within Echvi_3159at 3766.000 kb on + strand, within Echvi_3159at 3766.009 kb on - strand, within Echvi_3159at 3766.009 kb on - strand, within Echvi_3159at 3766.017 kb on + strand, within Echvi_3159at 3766.036 kb on - strand, within Echvi_3159at 3766.059 kb on + strand, within Echvi_3159at 3766.059 kb on + strand, within Echvi_3159at 3766.092 kb on + strand, within Echvi_3159at 3766.103 kb on - strand, within Echvi_3159at 3766.103 kb on - strand, within Echvi_3159at 3766.103 kb on - strand, within Echvi_3159at 3766.107 kb on + strand, within Echvi_3159at 3766.108 kb on - strand, within Echvi_3159at 3766.108 kb on - strand, within Echvi_3159at 3766.111 kb on - strand, within Echvi_3159at 3766.147 kb on + strand, within Echvi_3159at 3766.147 kb on + strand, within Echvi_3159at 3766.147 kb on + strand, within Echvi_3159at 3766.148 kb on - strand, within Echvi_3159at 3766.148 kb on - strand, within Echvi_3159at 3766.148 kb on - strand, within Echvi_3159at 3766.188 kb on - strand, within Echvi_3159at 3766.246 kb on - strand, within Echvi_3159at 3766.274 kb on - strand, within Echvi_3159

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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3,763,435 - -1.1
3,763,467 - Echvi_3157 0.13 -0.2
3,763,477 + Echvi_3157 0.14 -2.1
3,763,478 - Echvi_3157 0.14 +0.0
3,763,478 - Echvi_3157 0.14 +0.8
3,763,478 - Echvi_3157 0.14 +0.5
3,763,486 + Echvi_3157 0.15 -1.5
3,763,487 - Echvi_3157 0.15 +0.2
3,763,487 - Echvi_3157 0.15 -2.0
3,763,516 - Echvi_3157 0.18 +1.8
3,763,551 - Echvi_3157 0.21 -3.2
3,763,591 - Echvi_3157 0.25 +0.8
3,763,591 - Echvi_3157 0.25 -0.0
3,763,591 - Echvi_3157 0.25 +0.6
3,763,627 + Echvi_3157 0.29 -1.2
3,763,628 - Echvi_3157 0.29 -0.1
3,763,628 - Echvi_3157 0.29 +0.3
3,763,656 - Echvi_3157 0.32 -0.1
3,763,755 + Echvi_3157 0.41 -0.2
3,763,758 + Echvi_3157 0.42 -0.8
3,763,758 + Echvi_3157 0.42 +1.4
3,763,759 - Echvi_3157 0.42 -0.1
3,763,759 - Echvi_3157 0.42 -1.5
3,763,761 + Echvi_3157 0.42 +0.2
3,763,761 + Echvi_3157 0.42 -0.6
3,763,762 - Echvi_3157 0.42 +1.1
3,763,762 - Echvi_3157 0.42 +1.4
3,763,762 - Echvi_3157 0.42 +0.7
3,763,791 - Echvi_3157 0.45 +1.0
3,763,824 + Echvi_3157 0.48 -1.2
3,763,833 - Echvi_3157 0.49 +0.0
3,763,842 + Echvi_3157 0.50 -1.1
3,763,843 - Echvi_3157 0.50 -0.6
3,763,866 - Echvi_3157 0.52 +2.1
3,763,866 - Echvi_3157 0.52 -0.3
3,763,872 + Echvi_3157 0.53 -1.2
3,763,875 + Echvi_3157 0.53 -2.1
3,763,876 - Echvi_3157 0.53 +1.4
3,763,881 + Echvi_3157 0.54 +0.8
3,763,996 - Echvi_3157 0.65 -0.1
3,764,046 - Echvi_3157 0.70 -1.4
3,764,074 - Echvi_3157 0.73 -2.3
3,764,089 + Echvi_3157 0.74 -0.8
3,764,138 - Echvi_3157 0.79 -1.7
3,764,160 + Echvi_3157 0.81 -1.2
3,764,160 + Echvi_3157 0.81 +2.4
3,764,161 - Echvi_3157 0.81 -0.4
3,764,161 - Echvi_3157 0.81 +0.2
3,764,161 - Echvi_3157 0.81 -0.5
3,764,164 + Echvi_3157 0.82 -0.1
3,764,164 + Echvi_3157 0.82 -0.8
3,764,164 + Echvi_3157 0.82 -0.3
3,764,164 + Echvi_3157 0.82 -1.2
3,764,165 - Echvi_3157 0.82 -1.4
3,764,165 - Echvi_3157 0.82 +1.7
3,764,188 - Echvi_3157 0.84 +0.9
3,764,188 - Echvi_3157 0.84 +0.3
3,764,224 + Echvi_3157 0.88 -0.5
3,764,224 + Echvi_3157 0.88 -0.3
3,764,225 - Echvi_3157 0.88 -1.4
3,764,225 - Echvi_3157 0.88 -1.0
3,764,225 - Echvi_3157 0.88 +0.3
3,764,225 - Echvi_3157 0.88 +0.0
3,764,229 - Echvi_3157 0.88 -0.6
3,764,244 + Echvi_3157 0.90 -0.4
3,764,244 + Echvi_3157 0.90 +2.1
3,764,245 - Echvi_3157 0.90 -3.2
3,764,250 + -0.5
3,764,265 - -1.4
3,764,265 - +0.2
3,764,272 - +0.7
3,764,344 + +0.5
3,764,344 + +1.8
3,764,351 + -1.0
3,764,355 - +0.3
3,764,379 - -0.2
3,764,380 + +1.1
3,764,380 + +0.8
3,764,381 - -1.8
3,764,381 - +0.2
3,764,413 - -1.9
3,764,413 - -0.7
3,764,441 + -0.3
3,764,471 + Echvi_3158 0.10 +0.6
3,764,474 + Echvi_3158 0.11 -2.4
3,764,476 + Echvi_3158 0.11 -1.5
3,764,476 + Echvi_3158 0.11 +1.2
3,764,477 - Echvi_3158 0.11 -1.0
3,764,477 - Echvi_3158 0.11 -0.7
3,764,477 - Echvi_3158 0.11 +0.1
3,764,477 - Echvi_3158 0.11 +0.4
3,764,477 - Echvi_3158 0.11 +0.3
3,764,480 + Echvi_3158 0.11 +1.3
3,764,480 + Echvi_3158 0.11 -1.3
3,764,481 - Echvi_3158 0.11 +0.5
3,764,538 + Echvi_3158 0.17 -1.5
3,764,538 + Echvi_3158 0.17 -1.0
3,764,572 + Echvi_3158 0.20 +0.0
3,764,572 + Echvi_3158 0.20 -1.3
3,764,572 + Echvi_3158 0.20 -2.0
3,764,573 - Echvi_3158 0.20 -3.7
3,764,573 - Echvi_3158 0.20 +1.2
3,764,573 - Echvi_3158 0.20 -0.6
3,764,573 - Echvi_3158 0.20 -0.2
3,764,576 + Echvi_3158 0.20 -2.3
3,764,576 + Echvi_3158 0.20 +0.7
3,764,616 + Echvi_3158 0.24 -0.3
3,764,663 - Echvi_3158 0.28 +1.8
3,764,687 + Echvi_3158 0.31 -1.8
3,764,687 + Echvi_3158 0.31 -0.8
3,764,745 - Echvi_3158 0.36 -0.3
3,764,774 + Echvi_3158 0.39 -0.5
3,764,775 - Echvi_3158 0.39 -0.6
3,764,795 + Echvi_3158 0.41 -0.5
3,764,798 + Echvi_3158 0.41 -0.4
3,764,914 + Echvi_3158 0.52 -2.3
3,764,915 - Echvi_3158 0.52 +0.4
3,764,915 - Echvi_3158 0.52 -0.1
3,764,970 + Echvi_3158 0.57 -0.8
3,764,971 - Echvi_3158 0.57 +1.4
3,765,030 - Echvi_3158 0.63 -0.8
3,765,059 + Echvi_3158 0.66 +0.8
3,765,060 - Echvi_3158 0.66 +0.5
3,765,078 - Echvi_3158 0.68 +0.1
3,765,089 - Echvi_3158 0.69 +0.1
3,765,132 + Echvi_3158 0.73 -0.7
3,765,133 - Echvi_3158 0.73 -0.7
3,765,147 + Echvi_3158 0.74 +0.6
3,765,175 + Echvi_3158 0.77 -0.0
3,765,176 - Echvi_3158 0.77 +0.1
3,765,207 + Echvi_3158 0.80 +0.6
3,765,208 - Echvi_3158 0.80 +0.1
3,765,208 - Echvi_3158 0.80 -0.0
3,765,208 - Echvi_3158 0.80 -0.8
3,765,228 - Echvi_3158 0.82 +1.2
3,765,228 - Echvi_3158 0.82 -0.0
3,765,322 + +1.1
3,765,373 + +0.6
3,765,374 - +1.5
3,765,394 - -1.0
3,765,414 - +0.0
3,765,421 - +0.5
3,765,459 + +1.1
3,765,469 + -1.7
3,765,484 + +2.1
3,765,516 + -1.0
3,765,534 + -0.2
3,765,535 - +0.5
3,765,535 - +1.2
3,765,555 + +1.3
3,765,556 - -1.8
3,765,633 + Echvi_3159 0.15 +0.4
3,765,704 - Echvi_3159 0.20 -1.5
3,765,749 + Echvi_3159 0.23 +0.2
3,765,768 + Echvi_3159 0.25 -2.6
3,765,768 + Echvi_3159 0.25 +0.2
3,765,792 + Echvi_3159 0.27 +0.7
3,765,792 + Echvi_3159 0.27 +1.1
3,765,796 - Echvi_3159 0.27 +0.7
3,765,840 + Echvi_3159 0.30 -0.6
3,765,955 + Echvi_3159 0.39 +1.8
3,765,956 - Echvi_3159 0.39 +0.0
3,765,956 - Echvi_3159 0.39 -0.8
3,765,956 - Echvi_3159 0.39 -2.1
3,765,960 + Echvi_3159 0.39 -1.8
3,765,961 - Echvi_3159 0.39 -0.9
3,765,961 - Echvi_3159 0.39 +1.8
3,765,961 - Echvi_3159 0.39 -2.8
3,765,961 - Echvi_3159 0.39 +0.0
3,765,980 - Echvi_3159 0.40 +0.2
3,765,980 - Echvi_3159 0.40 +0.2
3,766,000 + Echvi_3159 0.42 -0.6
3,766,009 - Echvi_3159 0.43 -0.1
3,766,009 - Echvi_3159 0.43 -1.0
3,766,017 + Echvi_3159 0.43 +0.1
3,766,036 - Echvi_3159 0.45 +1.6
3,766,059 + Echvi_3159 0.46 +0.5
3,766,059 + Echvi_3159 0.46 -3.0
3,766,092 + Echvi_3159 0.49 +0.5
3,766,103 - Echvi_3159 0.50 -1.5
3,766,103 - Echvi_3159 0.50 -0.6
3,766,103 - Echvi_3159 0.50 -0.9
3,766,107 + Echvi_3159 0.50 +0.9
3,766,108 - Echvi_3159 0.50 +0.2
3,766,108 - Echvi_3159 0.50 +1.1
3,766,111 - Echvi_3159 0.50 +0.5
3,766,147 + Echvi_3159 0.53 +0.7
3,766,147 + Echvi_3159 0.53 -0.5
3,766,147 + Echvi_3159 0.53 -0.5
3,766,148 - Echvi_3159 0.53 -0.2
3,766,148 - Echvi_3159 0.53 -0.1
3,766,148 - Echvi_3159 0.53 -0.9
3,766,188 - Echvi_3159 0.56 -0.5
3,766,246 - Echvi_3159 0.60 -0.3
3,766,274 - Echvi_3159 0.62 -1.0

Or see this region's nucleotide sequence