Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2597 and Echvi_2598 overlap by 29 nucleotides Echvi_2598 and Echvi_2599 overlap by 19 nucleotides Echvi_2599 and Echvi_2600 overlap by 14 nucleotides Echvi_2600 and Echvi_2601 overlap by 8 nucleotides
Echvi_2597: Echvi_2597 - hypothetical protein, at 3,079,812 to 3,080,513
_2597
Echvi_2598: Echvi_2598 - Protein of unknown function (DUF3118)., at 3,080,485 to 3,081,357
_2598
Echvi_2599: Echvi_2599 - Glycosyltransferases involved in cell wall biogenesis, at 3,081,339 to 3,082,256
_2599
Echvi_2600: Echvi_2600 - Glycosyltransferases involved in cell wall biogenesis, at 3,082,243 to 3,083,091
_2600
Echvi_2601: Echvi_2601 - Predicted glycosyltransferases, at 3,083,084 to 3,083,992
_2601
Position (kb)
3081
3082
3083 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3080.375 kb on - strand, within Echvi_2597 at 3080.396 kb on + strand, within Echvi_2597 at 3080.396 kb on + strand, within Echvi_2597 at 3080.396 kb on + strand, within Echvi_2597 at 3080.397 kb on - strand, within Echvi_2597 at 3080.397 kb on - strand, within Echvi_2597 at 3080.397 kb on - strand, within Echvi_2597 at 3080.492 kb on - strand at 3080.551 kb on - strand at 3080.551 kb on - strand at 3080.551 kb on - strand at 3080.551 kb on - strand at 3080.592 kb on - strand, within Echvi_2598 at 3080.596 kb on - strand, within Echvi_2598 at 3080.640 kb on + strand, within Echvi_2598 at 3080.645 kb on - strand, within Echvi_2598 at 3080.661 kb on - strand, within Echvi_2598 at 3080.698 kb on + strand, within Echvi_2598 at 3080.719 kb on - strand, within Echvi_2598 at 3080.762 kb on + strand, within Echvi_2598 at 3080.860 kb on - strand, within Echvi_2598 at 3080.889 kb on - strand, within Echvi_2598 at 3080.900 kb on - strand, within Echvi_2598 at 3080.900 kb on - strand, within Echvi_2598 at 3080.900 kb on - strand, within Echvi_2598 at 3080.904 kb on + strand, within Echvi_2598 at 3080.921 kb on + strand, within Echvi_2598 at 3080.922 kb on - strand at 3080.926 kb on - strand, within Echvi_2598 at 3081.014 kb on - strand, within Echvi_2598 at 3081.034 kb on - strand, within Echvi_2598 at 3081.044 kb on + strand, within Echvi_2598 at 3081.074 kb on + strand, within Echvi_2598 at 3081.074 kb on + strand, within Echvi_2598 at 3081.109 kb on - strand, within Echvi_2598 at 3081.137 kb on + strand, within Echvi_2598 at 3081.138 kb on - strand, within Echvi_2598 at 3081.142 kb on - strand, within Echvi_2598 at 3081.163 kb on - strand, within Echvi_2598 at 3081.164 kb on + strand, within Echvi_2598 at 3081.165 kb on - strand, within Echvi_2598 at 3081.172 kb on - strand, within Echvi_2598 at 3081.172 kb on - strand, within Echvi_2598 at 3081.172 kb on - strand, within Echvi_2598 at 3081.172 kb on - strand, within Echvi_2598 at 3081.174 kb on + strand, within Echvi_2598 at 3081.174 kb on + strand, within Echvi_2598 at 3081.174 kb on + strand, within Echvi_2598 at 3081.174 kb on + strand, within Echvi_2598 at 3081.174 kb on + strand, within Echvi_2598 at 3081.174 kb on + strand, within Echvi_2598 at 3081.175 kb on - strand, within Echvi_2598 at 3081.175 kb on - strand, within Echvi_2598 at 3081.175 kb on - strand, within Echvi_2598 at 3081.175 kb on - strand, within Echvi_2598 at 3081.175 kb on - strand, within Echvi_2598 at 3081.177 kb on + strand, within Echvi_2598 at 3081.178 kb on - strand, within Echvi_2598 at 3081.178 kb on - strand, within Echvi_2598 at 3081.180 kb on - strand, within Echvi_2598 at 3081.180 kb on - strand, within Echvi_2598 at 3081.217 kb on + strand, within Echvi_2598 at 3081.252 kb on - strand, within Echvi_2598 at 3081.252 kb on - strand, within Echvi_2598 at 3081.257 kb on + strand, within Echvi_2598 at 3081.282 kb on - strand at 3081.282 kb on - strand at 3081.285 kb on - strand at 3081.478 kb on + strand, within Echvi_2599 at 3081.484 kb on + strand, within Echvi_2599 at 3081.484 kb on + strand, within Echvi_2599 at 3081.485 kb on - strand, within Echvi_2599 at 3081.502 kb on - strand, within Echvi_2599 at 3081.512 kb on - strand, within Echvi_2599 at 3081.512 kb on - strand, within Echvi_2599 at 3081.512 kb on - strand, within Echvi_2599 at 3081.520 kb on - strand, within Echvi_2599 at 3081.642 kb on - strand, within Echvi_2599 at 3081.669 kb on + strand, within Echvi_2599 at 3081.703 kb on + strand, within Echvi_2599 at 3081.706 kb on + strand, within Echvi_2599 at 3081.707 kb on - strand, within Echvi_2599 at 3081.726 kb on - strand, within Echvi_2599 at 3081.726 kb on - strand, within Echvi_2599 at 3081.731 kb on + strand, within Echvi_2599 at 3081.749 kb on + strand, within Echvi_2599 at 3081.753 kb on + strand, within Echvi_2599 at 3081.754 kb on - strand, within Echvi_2599 at 3081.773 kb on - strand, within Echvi_2599 at 3081.801 kb on + strand, within Echvi_2599 at 3081.836 kb on + strand, within Echvi_2599 at 3081.881 kb on + strand, within Echvi_2599 at 3081.894 kb on - strand, within Echvi_2599 at 3081.932 kb on + strand, within Echvi_2599 at 3081.988 kb on + strand, within Echvi_2599 at 3081.991 kb on + strand, within Echvi_2599 at 3081.991 kb on + strand, within Echvi_2599 at 3081.992 kb on - strand, within Echvi_2599 at 3082.022 kb on + strand, within Echvi_2599 at 3082.070 kb on + strand, within Echvi_2599 at 3082.071 kb on - strand, within Echvi_2599 at 3082.071 kb on - strand, within Echvi_2599 at 3082.146 kb on + strand, within Echvi_2599 at 3082.179 kb on + strand at 3082.179 kb on + strand at 3082.179 kb on + strand at 3082.199 kb on + strand at 3082.205 kb on - strand at 3082.242 kb on + strand at 3082.254 kb on + strand at 3082.255 kb on - strand at 3082.255 kb on - strand at 3082.269 kb on + strand at 3082.270 kb on - strand at 3082.270 kb on - strand at 3082.273 kb on + strand at 3082.273 kb on + strand at 3082.273 kb on + strand at 3082.273 kb on + strand at 3082.273 kb on + strand at 3082.273 kb on + strand at 3082.274 kb on - strand at 3082.274 kb on - strand at 3082.275 kb on + strand at 3082.275 kb on + strand at 3082.275 kb on + strand at 3082.276 kb on - strand at 3082.284 kb on + strand at 3082.285 kb on - strand at 3082.285 kb on - strand at 3082.329 kb on + strand, within Echvi_2600 at 3082.329 kb on + strand, within Echvi_2600 at 3082.330 kb on - strand, within Echvi_2600 at 3082.386 kb on - strand, within Echvi_2600 at 3082.407 kb on + strand, within Echvi_2600 at 3082.407 kb on + strand, within Echvi_2600 at 3082.426 kb on + strand, within Echvi_2600 at 3082.427 kb on - strand, within Echvi_2600 at 3082.445 kb on + strand, within Echvi_2600 at 3082.446 kb on - strand, within Echvi_2600 at 3082.446 kb on - strand, within Echvi_2600 at 3082.474 kb on + strand, within Echvi_2600 at 3082.489 kb on + strand, within Echvi_2600 at 3082.490 kb on - strand, within Echvi_2600 at 3082.555 kb on - strand, within Echvi_2600 at 3082.558 kb on - strand, within Echvi_2600 at 3082.567 kb on + strand, within Echvi_2600 at 3082.568 kb on - strand, within Echvi_2600 at 3082.625 kb on - strand, within Echvi_2600 at 3082.707 kb on - strand, within Echvi_2600 at 3082.720 kb on - strand, within Echvi_2600 at 3082.722 kb on + strand, within Echvi_2600 at 3082.722 kb on + strand, within Echvi_2600 at 3082.733 kb on - strand, within Echvi_2600 at 3082.809 kb on - strand, within Echvi_2600 at 3082.824 kb on + strand, within Echvi_2600 at 3082.840 kb on - strand, within Echvi_2600 at 3082.873 kb on + strand, within Echvi_2600 at 3082.874 kb on - strand, within Echvi_2600 at 3082.876 kb on - strand, within Echvi_2600 at 3082.902 kb on - strand, within Echvi_2600 at 3082.902 kb on - strand, within Echvi_2600 at 3082.905 kb on + strand, within Echvi_2600 at 3082.905 kb on + strand, within Echvi_2600 at 3082.906 kb on - strand, within Echvi_2600 at 3082.906 kb on - strand, within Echvi_2600 at 3082.979 kb on + strand, within Echvi_2600 at 3082.980 kb on - strand, within Echvi_2600 at 3082.980 kb on - strand, within Echvi_2600 at 3082.984 kb on + strand, within Echvi_2600 at 3083.030 kb on + strand at 3083.034 kb on + strand at 3083.042 kb on + strand at 3083.042 kb on + strand at 3083.043 kb on - strand at 3083.043 kb on - strand at 3083.043 kb on - strand at 3083.045 kb on + strand at 3083.045 kb on + strand at 3083.046 kb on - strand at 3083.046 kb on - strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.050 kb on + strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.051 kb on - strand at 3083.052 kb on + strand at 3083.052 kb on + strand at 3083.052 kb on + strand at 3083.053 kb on - strand at 3083.053 kb on - strand at 3083.053 kb on - strand at 3083.054 kb on + strand at 3083.055 kb on - strand at 3083.055 kb on - strand at 3083.129 kb on - strand at 3083.132 kb on + strand at 3083.132 kb on + strand at 3083.132 kb on + strand at 3083.132 kb on + strand at 3083.133 kb on - strand at 3083.133 kb on - strand at 3083.133 kb on - strand at 3083.133 kb on - strand at 3083.146 kb on + strand at 3083.208 kb on + strand, within Echvi_2601 at 3083.209 kb on - strand, within Echvi_2601 at 3083.218 kb on + strand, within Echvi_2601 at 3083.219 kb on - strand, within Echvi_2601
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 3,080,375 - Echvi_2597 0.80 +0.7 3,080,396 + Echvi_2597 0.83 -0.5 3,080,396 + Echvi_2597 0.83 +0.1 3,080,396 + Echvi_2597 0.83 -1.5 3,080,397 - Echvi_2597 0.83 +0.2 3,080,397 - Echvi_2597 0.83 -0.4 3,080,397 - Echvi_2597 0.83 +0.7 3,080,492 - -0.3 3,080,551 - -0.7 3,080,551 - +0.0 3,080,551 - -0.1 3,080,551 - +1.1 3,080,592 - Echvi_2598 0.12 +0.8 3,080,596 - Echvi_2598 0.13 -0.3 3,080,640 + Echvi_2598 0.18 +0.5 3,080,645 - Echvi_2598 0.18 -1.1 3,080,661 - Echvi_2598 0.20 +1.0 3,080,698 + Echvi_2598 0.24 -0.4 3,080,719 - Echvi_2598 0.27 +1.0 3,080,762 + Echvi_2598 0.32 -1.9 3,080,860 - Echvi_2598 0.43 +0.7 3,080,889 - Echvi_2598 0.46 -0.1 3,080,900 - Echvi_2598 0.48 -1.4 3,080,900 - Echvi_2598 0.48 +0.4 3,080,900 - Echvi_2598 0.48 +1.4 3,080,904 + Echvi_2598 0.48 -0.4 3,080,921 + Echvi_2598 0.50 -0.1 3,080,922 - +4.4 3,080,926 - Echvi_2598 0.51 +1.3 3,081,014 - Echvi_2598 0.61 +0.3 3,081,034 - Echvi_2598 0.63 +0.6 3,081,044 + Echvi_2598 0.64 +0.9 3,081,074 + Echvi_2598 0.67 -0.7 3,081,074 + Echvi_2598 0.67 +0.9 3,081,109 - Echvi_2598 0.71 +2.0 3,081,137 + Echvi_2598 0.75 +0.3 3,081,138 - Echvi_2598 0.75 +0.2 3,081,142 - Echvi_2598 0.75 -3.0 3,081,163 - Echvi_2598 0.78 -1.6 3,081,164 + Echvi_2598 0.78 +1.3 3,081,165 - Echvi_2598 0.78 +0.0 3,081,172 - Echvi_2598 0.79 -2.9 3,081,172 - Echvi_2598 0.79 -1.5 3,081,172 - Echvi_2598 0.79 +0.8 3,081,172 - Echvi_2598 0.79 +1.8 3,081,174 + Echvi_2598 0.79 -0.5 3,081,174 + Echvi_2598 0.79 -0.9 3,081,174 + Echvi_2598 0.79 -2.0 3,081,174 + Echvi_2598 0.79 -0.1 3,081,174 + Echvi_2598 0.79 -0.3 3,081,174 + Echvi_2598 0.79 -0.0 3,081,175 - Echvi_2598 0.79 +0.3 3,081,175 - Echvi_2598 0.79 -0.6 3,081,175 - Echvi_2598 0.79 -1.5 3,081,175 - Echvi_2598 0.79 -0.0 3,081,175 - Echvi_2598 0.79 +2.4 3,081,177 + Echvi_2598 0.79 -1.9 3,081,178 - Echvi_2598 0.79 -0.9 3,081,178 - Echvi_2598 0.79 -1.2 3,081,180 - Echvi_2598 0.80 +1.0 3,081,180 - Echvi_2598 0.80 -1.2 3,081,217 + Echvi_2598 0.84 -1.4 3,081,252 - Echvi_2598 0.88 -1.2 3,081,252 - Echvi_2598 0.88 +0.4 3,081,257 + Echvi_2598 0.88 +1.6 3,081,282 - -0.7 3,081,282 - +3.4 3,081,285 - +1.2 3,081,478 + Echvi_2599 0.15 +0.1 3,081,484 + Echvi_2599 0.16 -1.3 3,081,484 + Echvi_2599 0.16 +1.1 3,081,485 - Echvi_2599 0.16 -1.7 3,081,502 - Echvi_2599 0.18 -0.9 3,081,512 - Echvi_2599 0.19 -0.2 3,081,512 - Echvi_2599 0.19 +1.6 3,081,512 - Echvi_2599 0.19 -0.4 3,081,520 - Echvi_2599 0.20 +2.0 3,081,642 - Echvi_2599 0.33 +0.8 3,081,669 + Echvi_2599 0.36 +1.5 3,081,703 + Echvi_2599 0.40 -0.4 3,081,706 + Echvi_2599 0.40 +0.1 3,081,707 - Echvi_2599 0.40 -1.0 3,081,726 - Echvi_2599 0.42 +0.3 3,081,726 - Echvi_2599 0.42 +0.1 3,081,731 + Echvi_2599 0.43 +0.9 3,081,749 + Echvi_2599 0.45 -0.4 3,081,753 + Echvi_2599 0.45 +0.6 3,081,754 - Echvi_2599 0.45 +0.5 3,081,773 - Echvi_2599 0.47 +0.1 3,081,801 + Echvi_2599 0.50 +0.7 3,081,836 + Echvi_2599 0.54 +0.4 3,081,881 + Echvi_2599 0.59 +0.3 3,081,894 - Echvi_2599 0.60 +0.8 3,081,932 + Echvi_2599 0.65 +1.2 3,081,988 + Echvi_2599 0.71 -0.1 3,081,991 + Echvi_2599 0.71 +1.2 3,081,991 + Echvi_2599 0.71 +0.2 3,081,992 - Echvi_2599 0.71 +0.8 3,082,022 + Echvi_2599 0.74 +0.7 3,082,070 + Echvi_2599 0.80 -0.4 3,082,071 - Echvi_2599 0.80 -0.7 3,082,071 - Echvi_2599 0.80 +0.6 3,082,146 + Echvi_2599 0.88 -0.4 3,082,179 + +0.3 3,082,179 + +0.9 3,082,179 + +0.4 3,082,199 + -0.1 3,082,205 - +0.5 3,082,242 + +1.7 3,082,254 + +0.7 3,082,255 - +0.3 3,082,255 - +1.0 3,082,269 + +0.7 3,082,270 - -0.5 3,082,270 - -0.3 3,082,273 + -1.2 3,082,273 + -0.8 3,082,273 + -0.5 3,082,273 + +0.3 3,082,273 + +0.7 3,082,273 + -0.6 3,082,274 - +1.5 3,082,274 - +0.8 3,082,275 + +1.1 3,082,275 + +1.4 3,082,275 + -0.1 3,082,276 - -0.7 3,082,284 + +1.5 3,082,285 - +0.7 3,082,285 - +1.9 3,082,329 + Echvi_2600 0.10 +1.8 3,082,329 + Echvi_2600 0.10 -1.0 3,082,330 - Echvi_2600 0.10 +2.3 3,082,386 - Echvi_2600 0.17 +0.8 3,082,407 + Echvi_2600 0.19 +0.7 3,082,407 + Echvi_2600 0.19 -0.2 3,082,426 + Echvi_2600 0.22 +1.7 3,082,427 - Echvi_2600 0.22 -2.3 3,082,445 + Echvi_2600 0.24 +0.6 3,082,446 - Echvi_2600 0.24 +1.2 3,082,446 - Echvi_2600 0.24 +0.4 3,082,474 + Echvi_2600 0.27 +1.1 3,082,489 + Echvi_2600 0.29 +1.3 3,082,490 - Echvi_2600 0.29 +0.1 3,082,555 - Echvi_2600 0.37 +1.2 3,082,558 - Echvi_2600 0.37 +1.2 3,082,567 + Echvi_2600 0.38 +0.3 3,082,568 - Echvi_2600 0.38 -2.9 3,082,625 - Echvi_2600 0.45 +3.6 3,082,707 - Echvi_2600 0.55 -0.3 3,082,720 - Echvi_2600 0.56 -1.6 3,082,722 + Echvi_2600 0.56 +0.4 3,082,722 + Echvi_2600 0.56 +0.7 3,082,733 - Echvi_2600 0.58 -0.5 3,082,809 - Echvi_2600 0.67 -0.4 3,082,824 + Echvi_2600 0.68 +0.5 3,082,840 - Echvi_2600 0.70 -0.5 3,082,873 + Echvi_2600 0.74 -1.7 3,082,874 - Echvi_2600 0.74 +1.0 3,082,876 - Echvi_2600 0.75 +1.9 3,082,902 - Echvi_2600 0.78 -0.3 3,082,902 - Echvi_2600 0.78 +0.0 3,082,905 + Echvi_2600 0.78 +0.1 3,082,905 + Echvi_2600 0.78 +0.0 3,082,906 - Echvi_2600 0.78 +0.5 3,082,906 - Echvi_2600 0.78 +0.2 3,082,979 + Echvi_2600 0.87 -1.1 3,082,980 - Echvi_2600 0.87 +0.8 3,082,980 - Echvi_2600 0.87 +0.4 3,082,984 + Echvi_2600 0.87 +0.2 3,083,030 + +0.9 3,083,034 + +1.8 3,083,042 + -0.5 3,083,042 + -1.4 3,083,043 - +0.4 3,083,043 - +1.7 3,083,043 - +0.1 3,083,045 + +0.7 3,083,045 + -1.9 3,083,046 - +1.1 3,083,046 - +1.7 3,083,050 + -0.3 3,083,050 + -0.7 3,083,050 + -0.3 3,083,050 + -0.9 3,083,050 + +1.8 3,083,050 + -0.6 3,083,050 + +2.8 3,083,050 + -0.7 3,083,050 + +1.5 3,083,050 + +1.5 3,083,051 - +0.2 3,083,051 - +1.3 3,083,051 - -0.2 3,083,051 - -0.5 3,083,051 - +1.2 3,083,051 - +0.8 3,083,051 - +0.3 3,083,051 - +0.1 3,083,051 - +0.9 3,083,052 + +0.4 3,083,052 + +0.8 3,083,052 + +1.3 3,083,053 - -0.4 3,083,053 - +0.9 3,083,053 - +0.3 3,083,054 + -0.1 3,083,055 - +1.1 3,083,055 - +1.0 3,083,129 - +1.4 3,083,132 + -1.5 3,083,132 + +0.8 3,083,132 + -1.7 3,083,132 + -0.1 3,083,133 - +0.5 3,083,133 - +0.5 3,083,133 - +0.0 3,083,133 - +1.4 3,083,146 + +0.6 3,083,208 + Echvi_2601 0.14 +0.4 3,083,209 - Echvi_2601 0.14 +0.2 3,083,218 + Echvi_2601 0.15 +0.7 3,083,219 - Echvi_2601 0.15 -1.9
Or see this region's nucleotide sequence