Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2592

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2591 and Echvi_2592 are separated by 439 nucleotidesEchvi_2592 and Echvi_2593 are separated by 234 nucleotides Echvi_2591: Echvi_2591 - Arylsulfatase A and related enzymes, at 3,072,241 to 3,074,565 _2591 Echvi_2592: Echvi_2592 - ABC-type polysaccharide/polyol phosphate export systems, permease component, at 3,075,005 to 3,075,820 _2592 Echvi_2593: Echvi_2593 - ABC-type polysaccharide/polyol phosphate transport system, ATPase component, at 3,076,055 to 3,077,335 _2593 Position (kb) 3075 3076Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3074.128 kb on - strand, within Echvi_2591at 3074.178 kb on + strand, within Echvi_2591at 3074.179 kb on - strand, within Echvi_2591at 3074.187 kb on + strand, within Echvi_2591at 3074.221 kb on + strand, within Echvi_2591at 3074.240 kb on + strand, within Echvi_2591at 3074.241 kb on - strand, within Echvi_2591at 3074.243 kb on - strand, within Echvi_2591at 3074.243 kb on - strand, within Echvi_2591at 3074.257 kb on + strand, within Echvi_2591at 3074.257 kb on + strand, within Echvi_2591at 3074.257 kb on + strand, within Echvi_2591at 3074.277 kb on + strand, within Echvi_2591at 3074.277 kb on + strand, within Echvi_2591at 3074.277 kb on + strand, within Echvi_2591at 3074.277 kb on + strand, within Echvi_2591at 3074.278 kb on - strand, within Echvi_2591at 3074.278 kb on - strand, within Echvi_2591at 3074.278 kb on - strand, within Echvi_2591at 3074.342 kb on + strandat 3074.342 kb on + strandat 3074.342 kb on + strandat 3074.342 kb on + strandat 3074.343 kb on - strandat 3074.442 kb on + strandat 3074.442 kb on + strandat 3074.442 kb on + strandat 3074.442 kb on + strandat 3074.442 kb on + strandat 3074.443 kb on - strandat 3074.443 kb on - strandat 3074.443 kb on - strandat 3074.443 kb on - strandat 3074.443 kb on - strandat 3074.500 kb on + strandat 3074.501 kb on - strandat 3074.501 kb on - strandat 3074.505 kb on + strandat 3074.514 kb on + strandat 3074.552 kb on + strandat 3074.552 kb on + strandat 3074.556 kb on + strandat 3074.556 kb on + strandat 3074.663 kb on + strandat 3074.891 kb on + strandat 3074.958 kb on - strandat 3074.985 kb on + strandat 3074.987 kb on + strandat 3075.019 kb on - strandat 3075.064 kb on - strandat 3075.072 kb on - strandat 3075.072 kb on - strandat 3075.074 kb on - strandat 3075.074 kb on - strandat 3075.084 kb on + strandat 3075.085 kb on - strandat 3075.099 kb on + strand, within Echvi_2592at 3075.120 kb on - strand, within Echvi_2592at 3075.130 kb on + strand, within Echvi_2592at 3075.130 kb on + strand, within Echvi_2592at 3075.131 kb on - strand, within Echvi_2592at 3075.233 kb on + strand, within Echvi_2592at 3075.234 kb on - strand, within Echvi_2592at 3075.234 kb on - strand, within Echvi_2592at 3075.235 kb on + strand, within Echvi_2592at 3075.289 kb on + strand, within Echvi_2592at 3075.289 kb on + strand, within Echvi_2592at 3075.311 kb on - strand, within Echvi_2592at 3075.492 kb on + strand, within Echvi_2592at 3075.492 kb on + strand, within Echvi_2592at 3075.492 kb on + strand, within Echvi_2592at 3075.493 kb on - strand, within Echvi_2592at 3075.493 kb on - strand, within Echvi_2592at 3075.518 kb on - strand, within Echvi_2592at 3075.533 kb on - strand, within Echvi_2592at 3075.593 kb on + strand, within Echvi_2592at 3075.593 kb on + strand, within Echvi_2592at 3075.593 kb on + strand, within Echvi_2592at 3075.594 kb on - strand, within Echvi_2592at 3075.650 kb on + strand, within Echvi_2592at 3075.650 kb on + strand, within Echvi_2592at 3075.651 kb on - strand, within Echvi_2592at 3075.651 kb on - strand, within Echvi_2592at 3075.651 kb on - strand, within Echvi_2592at 3075.653 kb on - strand, within Echvi_2592at 3075.780 kb on - strandat 3075.813 kb on + strandat 3075.813 kb on + strandat 3075.814 kb on - strandat 3075.818 kb on + strandat 3075.818 kb on + strandat 3075.819 kb on - strandat 3075.846 kb on + strandat 3075.847 kb on - strandat 3075.855 kb on + strandat 3075.855 kb on + strandat 3075.856 kb on - strandat 3075.856 kb on - strandat 3075.856 kb on - strandat 3075.876 kb on - strandat 3075.876 kb on - strandat 3075.932 kb on + strandat 3075.933 kb on - strandat 3075.974 kb on - strandat 3076.002 kb on + strandat 3076.035 kb on - strandat 3076.049 kb on + strandat 3076.072 kb on - strandat 3076.105 kb on - strandat 3076.105 kb on - strandat 3076.201 kb on + strand, within Echvi_2593at 3076.321 kb on - strand, within Echvi_2593at 3076.321 kb on - strand, within Echvi_2593at 3076.326 kb on + strand, within Echvi_2593at 3076.327 kb on - strand, within Echvi_2593at 3076.399 kb on - strand, within Echvi_2593at 3076.438 kb on + strand, within Echvi_2593at 3076.438 kb on + strand, within Echvi_2593at 3076.438 kb on + strand, within Echvi_2593at 3076.438 kb on + strand, within Echvi_2593at 3076.439 kb on - strand, within Echvi_2593at 3076.443 kb on - strand, within Echvi_2593at 3076.443 kb on - strand, within Echvi_2593at 3076.444 kb on + strand, within Echvi_2593at 3076.445 kb on - strand, within Echvi_2593at 3076.445 kb on - strand, within Echvi_2593at 3076.522 kb on - strand, within Echvi_2593at 3076.732 kb on + strand, within Echvi_2593at 3076.752 kb on + strand, within Echvi_2593at 3076.765 kb on + strand, within Echvi_2593at 3076.766 kb on - strand, within Echvi_2593at 3076.816 kb on - strand, within Echvi_2593at 3076.816 kb on - strand, within Echvi_2593

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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3,074,128 - Echvi_2591 0.81 -0.8
3,074,178 + Echvi_2591 0.83 +0.3
3,074,179 - Echvi_2591 0.83 +1.3
3,074,187 + Echvi_2591 0.84 +0.6
3,074,221 + Echvi_2591 0.85 -2.8
3,074,240 + Echvi_2591 0.86 +0.0
3,074,241 - Echvi_2591 0.86 -0.2
3,074,243 - Echvi_2591 0.86 +0.2
3,074,243 - Echvi_2591 0.86 +0.4
3,074,257 + Echvi_2591 0.87 -0.2
3,074,257 + Echvi_2591 0.87 +1.1
3,074,257 + Echvi_2591 0.87 +0.5
3,074,277 + Echvi_2591 0.88 -0.2
3,074,277 + Echvi_2591 0.88 +0.3
3,074,277 + Echvi_2591 0.88 -0.5
3,074,277 + Echvi_2591 0.88 +0.4
3,074,278 - Echvi_2591 0.88 -0.0
3,074,278 - Echvi_2591 0.88 -0.3
3,074,278 - Echvi_2591 0.88 +1.1
3,074,342 + +0.1
3,074,342 + -1.5
3,074,342 + -0.4
3,074,342 + -1.5
3,074,343 - +0.7
3,074,442 + -0.5
3,074,442 + +1.6
3,074,442 + +0.6
3,074,442 + -0.3
3,074,442 + +0.7
3,074,443 - +0.4
3,074,443 - +1.4
3,074,443 - +0.3
3,074,443 - -0.7
3,074,443 - -0.8
3,074,500 + +0.0
3,074,501 - +0.3
3,074,501 - +0.8
3,074,505 + +0.1
3,074,514 + -0.7
3,074,552 + -2.2
3,074,552 + -0.7
3,074,556 + -1.4
3,074,556 + -0.1
3,074,663 + -0.5
3,074,891 + -0.9
3,074,958 - -0.5
3,074,985 + -0.1
3,074,987 + -0.5
3,075,019 - -0.2
3,075,064 - -0.3
3,075,072 - +0.9
3,075,072 - +1.5
3,075,074 - -0.7
3,075,074 - -0.2
3,075,084 + -0.3
3,075,085 - +0.3
3,075,099 + Echvi_2592 0.12 +0.5
3,075,120 - Echvi_2592 0.14 -1.2
3,075,130 + Echvi_2592 0.15 +0.8
3,075,130 + Echvi_2592 0.15 +0.6
3,075,131 - Echvi_2592 0.15 +0.4
3,075,233 + Echvi_2592 0.28 -2.7
3,075,234 - Echvi_2592 0.28 +0.9
3,075,234 - Echvi_2592 0.28 +0.4
3,075,235 + Echvi_2592 0.28 +0.8
3,075,289 + Echvi_2592 0.35 +2.4
3,075,289 + Echvi_2592 0.35 +0.1
3,075,311 - Echvi_2592 0.38 -0.3
3,075,492 + Echvi_2592 0.60 +1.3
3,075,492 + Echvi_2592 0.60 +0.7
3,075,492 + Echvi_2592 0.60 +1.6
3,075,493 - Echvi_2592 0.60 -0.2
3,075,493 - Echvi_2592 0.60 +0.2
3,075,518 - Echvi_2592 0.63 +0.1
3,075,533 - Echvi_2592 0.65 -0.2
3,075,593 + Echvi_2592 0.72 +0.1
3,075,593 + Echvi_2592 0.72 +0.9
3,075,593 + Echvi_2592 0.72 -0.1
3,075,594 - Echvi_2592 0.72 -0.3
3,075,650 + Echvi_2592 0.79 +1.0
3,075,650 + Echvi_2592 0.79 +1.0
3,075,651 - Echvi_2592 0.79 +0.6
3,075,651 - Echvi_2592 0.79 +0.8
3,075,651 - Echvi_2592 0.79 +0.3
3,075,653 - Echvi_2592 0.79 +0.1
3,075,780 - +0.2
3,075,813 + +0.9
3,075,813 + +0.5
3,075,814 - -0.3
3,075,818 + -0.0
3,075,818 + +0.8
3,075,819 - +0.1
3,075,846 + +1.1
3,075,847 - -1.1
3,075,855 + -0.7
3,075,855 + -0.0
3,075,856 - -0.2
3,075,856 - -0.3
3,075,856 - +0.9
3,075,876 - -0.7
3,075,876 - -2.2
3,075,932 + -0.2
3,075,933 - +0.0
3,075,974 - -0.5
3,076,002 + +0.1
3,076,035 - -0.2
3,076,049 + -1.0
3,076,072 - +2.6
3,076,105 - -0.4
3,076,105 - +0.7
3,076,201 + Echvi_2593 0.11 +0.3
3,076,321 - Echvi_2593 0.21 -0.4
3,076,321 - Echvi_2593 0.21 +0.1
3,076,326 + Echvi_2593 0.21 +0.7
3,076,327 - Echvi_2593 0.21 +0.8
3,076,399 - Echvi_2593 0.27 -1.7
3,076,438 + Echvi_2593 0.30 +1.1
3,076,438 + Echvi_2593 0.30 +0.1
3,076,438 + Echvi_2593 0.30 -0.4
3,076,438 + Echvi_2593 0.30 -0.9
3,076,439 - Echvi_2593 0.30 +0.0
3,076,443 - Echvi_2593 0.30 -0.9
3,076,443 - Echvi_2593 0.30 +1.3
3,076,444 + Echvi_2593 0.30 +1.0
3,076,445 - Echvi_2593 0.30 -0.5
3,076,445 - Echvi_2593 0.30 -1.4
3,076,522 - Echvi_2593 0.36 +0.0
3,076,732 + Echvi_2593 0.53 -0.0
3,076,752 + Echvi_2593 0.54 +0.7
3,076,765 + Echvi_2593 0.55 +1.4
3,076,766 - Echvi_2593 0.56 -0.1
3,076,816 - Echvi_2593 0.59 +1.5
3,076,816 - Echvi_2593 0.59 +1.0

Or see this region's nucleotide sequence