Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2466

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_2465 and Echvi_2466 are separated by 109 nucleotidesEchvi_2466 and Echvi_2467 are separated by 2 nucleotides Echvi_2465: Echvi_2465 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 2,924,687 to 2,925,601 _2465 Echvi_2466: Echvi_2466 - Glutathione peroxidase, at 2,925,711 to 2,926,307 _2466 Echvi_2467: Echvi_2467 - arginyl-tRNA synthetase, at 2,926,310 to 2,928,100 _2467 Position (kb) 2925 2926 2927Strain fitness (log2 ratio) -2 -1 0 1 2at 2925.619 kb on - strandat 2925.636 kb on - strandat 2925.638 kb on - strandat 2925.800 kb on - strand, within Echvi_2466at 2925.800 kb on - strand, within Echvi_2466at 2925.803 kb on - strand, within Echvi_2466at 2925.822 kb on - strand, within Echvi_2466at 2925.935 kb on - strand, within Echvi_2466at 2926.064 kb on - strand, within Echvi_2466at 2926.093 kb on - strand, within Echvi_2466at 2926.175 kb on - strand, within Echvi_2466at 2926.297 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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2,925,619 - +1.1
2,925,636 - -0.3
2,925,638 - -1.9
2,925,800 - Echvi_2466 0.15 -1.1
2,925,800 - Echvi_2466 0.15 -1.9
2,925,803 - Echvi_2466 0.15 -1.1
2,925,822 - Echvi_2466 0.19 -1.2
2,925,935 - Echvi_2466 0.38 -1.4
2,926,064 - Echvi_2466 0.59 +2.7
2,926,093 - Echvi_2466 0.64 +1.6
2,926,175 - Echvi_2466 0.78 -2.1
2,926,297 - -1.1

Or see this region's nucleotide sequence