Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1703

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_1702 and Echvi_1703 are separated by 200 nucleotidesEchvi_1703 and Echvi_1704 are separated by 196 nucleotides Echvi_1702: Echvi_1702 - hypothetical protein, at 2,001,272 to 2,003,731 _1702 Echvi_1703: Echvi_1703 - Uncharacterized protein conserved in bacteria, at 2,003,932 to 2,005,971 _1703 Echvi_1704: Echvi_1704 - hypothetical protein, at 2,006,168 to 2,006,872 _1704 Position (kb) 2003 2004 2005 2006Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2002.953 kb on + strand, within Echvi_1702at 2002.956 kb on + strand, within Echvi_1702at 2002.981 kb on + strand, within Echvi_1702at 2002.981 kb on + strand, within Echvi_1702at 2002.981 kb on + strand, within Echvi_1702at 2002.982 kb on - strand, within Echvi_1702at 2002.982 kb on - strand, within Echvi_1702at 2002.982 kb on - strand, within Echvi_1702at 2002.982 kb on - strand, within Echvi_1702at 2002.982 kb on - strand, within Echvi_1702at 2002.982 kb on - strand, within Echvi_1702at 2002.982 kb on - strand, within Echvi_1702at 2002.985 kb on + strand, within Echvi_1702at 2002.986 kb on - strand, within Echvi_1702at 2003.025 kb on - strand, within Echvi_1702at 2003.094 kb on + strand, within Echvi_1702at 2003.095 kb on - strand, within Echvi_1702at 2003.114 kb on + strand, within Echvi_1702at 2003.130 kb on - strand, within Echvi_1702at 2003.193 kb on + strand, within Echvi_1702at 2003.211 kb on + strand, within Echvi_1702at 2003.212 kb on - strand, within Echvi_1702at 2003.231 kb on - strand, within Echvi_1702at 2003.231 kb on - strand, within Echvi_1702at 2003.231 kb on - strand, within Echvi_1702at 2003.625 kb on + strandat 2003.625 kb on + strandat 2003.672 kb on - strandat 2003.678 kb on - strandat 2003.739 kb on + strandat 2003.740 kb on - strandat 2003.919 kb on + strandat 2003.920 kb on - strandat 2003.925 kb on + strandat 2003.928 kb on + strandat 2003.928 kb on + strandat 2003.928 kb on + strandat 2003.929 kb on - strandat 2003.945 kb on - strandat 2003.948 kb on + strandat 2003.949 kb on - strandat 2004.133 kb on - strandat 2004.334 kb on - strand, within Echvi_1703at 2004.334 kb on - strand, within Echvi_1703at 2004.339 kb on + strand, within Echvi_1703at 2004.339 kb on + strand, within Echvi_1703at 2004.340 kb on - strand, within Echvi_1703at 2004.404 kb on + strand, within Echvi_1703at 2004.446 kb on - strand, within Echvi_1703at 2004.450 kb on + strand, within Echvi_1703at 2004.486 kb on + strand, within Echvi_1703at 2004.487 kb on - strand, within Echvi_1703at 2004.487 kb on - strand, within Echvi_1703at 2004.504 kb on + strand, within Echvi_1703at 2004.556 kb on - strand, within Echvi_1703at 2004.604 kb on + strand, within Echvi_1703at 2004.604 kb on + strand, within Echvi_1703at 2004.604 kb on + strand, within Echvi_1703at 2004.605 kb on - strand, within Echvi_1703at 2004.626 kb on - strand, within Echvi_1703at 2004.643 kb on - strand, within Echvi_1703at 2004.776 kb on - strand, within Echvi_1703at 2004.839 kb on + strand, within Echvi_1703at 2004.904 kb on + strand, within Echvi_1703at 2004.905 kb on - strand, within Echvi_1703at 2004.934 kb on + strand, within Echvi_1703at 2004.934 kb on + strand, within Echvi_1703at 2004.934 kb on + strand, within Echvi_1703at 2004.934 kb on + strand, within Echvi_1703at 2004.935 kb on - strand, within Echvi_1703at 2004.935 kb on - strand, within Echvi_1703at 2004.971 kb on - strand, within Echvi_1703at 2005.081 kb on + strand, within Echvi_1703at 2005.081 kb on + strand, within Echvi_1703at 2005.082 kb on - strand, within Echvi_1703at 2005.082 kb on - strand, within Echvi_1703at 2005.225 kb on + strand, within Echvi_1703at 2005.225 kb on + strand, within Echvi_1703at 2005.226 kb on - strand, within Echvi_1703at 2005.227 kb on + strand, within Echvi_1703at 2005.228 kb on - strand, within Echvi_1703at 2005.228 kb on - strand, within Echvi_1703at 2005.228 kb on - strand, within Echvi_1703at 2005.228 kb on - strand, within Echvi_1703at 2005.229 kb on + strand, within Echvi_1703at 2005.230 kb on - strand, within Echvi_1703at 2005.288 kb on + strand, within Echvi_1703at 2005.288 kb on + strand, within Echvi_1703at 2005.288 kb on + strand, within Echvi_1703at 2005.288 kb on + strand, within Echvi_1703at 2005.288 kb on + strand, within Echvi_1703at 2005.289 kb on - strand, within Echvi_1703at 2005.289 kb on - strand, within Echvi_1703at 2005.294 kb on + strand, within Echvi_1703at 2005.296 kb on + strand, within Echvi_1703at 2005.296 kb on + strand, within Echvi_1703at 2005.296 kb on + strand, within Echvi_1703at 2005.296 kb on + strand, within Echvi_1703at 2005.297 kb on - strand, within Echvi_1703at 2005.297 kb on - strand, within Echvi_1703at 2005.297 kb on - strand, within Echvi_1703at 2005.297 kb on - strand, within Echvi_1703at 2005.319 kb on - strand, within Echvi_1703at 2005.319 kb on - strand, within Echvi_1703at 2005.331 kb on - strand, within Echvi_1703at 2005.331 kb on - strand, within Echvi_1703at 2005.341 kb on + strand, within Echvi_1703at 2005.399 kb on + strand, within Echvi_1703at 2005.453 kb on + strand, within Echvi_1703at 2005.454 kb on - strand, within Echvi_1703at 2005.547 kb on - strand, within Echvi_1703at 2005.547 kb on - strand, within Echvi_1703at 2005.550 kb on + strand, within Echvi_1703at 2005.550 kb on + strand, within Echvi_1703at 2005.615 kb on + strand, within Echvi_1703at 2005.615 kb on + strand, within Echvi_1703at 2005.616 kb on - strand, within Echvi_1703at 2005.816 kb on + strandat 2005.816 kb on + strandat 2005.816 kb on + strandat 2005.816 kb on + strandat 2005.817 kb on - strandat 2005.819 kb on + strandat 2005.819 kb on + strandat 2005.890 kb on + strandat 2005.907 kb on - strandat 2005.909 kb on + strandat 2005.910 kb on - strandat 2005.910 kb on - strandat 2005.970 kb on - strandat 2006.033 kb on + strandat 2006.034 kb on - strandat 2006.034 kb on - strandat 2006.051 kb on + strandat 2006.224 kb on + strandat 2006.229 kb on + strandat 2006.242 kb on + strand, within Echvi_1704at 2006.242 kb on + strand, within Echvi_1704at 2006.297 kb on + strand, within Echvi_1704at 2006.297 kb on + strand, within Echvi_1704at 2006.300 kb on + strand, within Echvi_1704at 2006.301 kb on - strand, within Echvi_1704at 2006.322 kb on - strand, within Echvi_1704at 2006.337 kb on + strand, within Echvi_1704at 2006.369 kb on + strand, within Echvi_1704at 2006.369 kb on + strand, within Echvi_1704at 2006.370 kb on - strand, within Echvi_1704at 2006.404 kb on + strand, within Echvi_1704at 2006.405 kb on - strand, within Echvi_1704at 2006.420 kb on - strand, within Echvi_1704at 2006.420 kb on - strand, within Echvi_1704at 2006.420 kb on - strand, within Echvi_1704at 2006.421 kb on + strand, within Echvi_1704at 2006.421 kb on + strand, within Echvi_1704at 2006.421 kb on + strand, within Echvi_1704at 2006.421 kb on + strand, within Echvi_1704at 2006.421 kb on + strand, within Echvi_1704at 2006.421 kb on + strand, within Echvi_1704at 2006.421 kb on + strand, within Echvi_1704at 2006.422 kb on - strand, within Echvi_1704at 2006.422 kb on - strand, within Echvi_1704at 2006.422 kb on - strand, within Echvi_1704at 2006.422 kb on - strand, within Echvi_1704at 2006.475 kb on + strand, within Echvi_1704at 2006.535 kb on + strand, within Echvi_1704at 2006.535 kb on + strand, within Echvi_1704at 2006.535 kb on + strand, within Echvi_1704at 2006.535 kb on + strand, within Echvi_1704at 2006.536 kb on - strand, within Echvi_1704at 2006.581 kb on + strand, within Echvi_1704at 2006.581 kb on + strand, within Echvi_1704at 2006.581 kb on + strand, within Echvi_1704at 2006.582 kb on - strand, within Echvi_1704at 2006.582 kb on - strand, within Echvi_1704at 2006.582 kb on - strandat 2006.599 kb on + strand, within Echvi_1704at 2006.623 kb on + strand, within Echvi_1704at 2006.623 kb on + strand, within Echvi_1704at 2006.627 kb on - strand, within Echvi_1704at 2006.627 kb on - strand, within Echvi_1704at 2006.627 kb on - strand, within Echvi_1704at 2006.635 kb on + strand, within Echvi_1704at 2006.636 kb on - strand, within Echvi_1704at 2006.659 kb on + strand, within Echvi_1704at 2006.705 kb on + strand, within Echvi_1704at 2006.706 kb on - strand, within Echvi_1704at 2006.770 kb on + strand, within Echvi_1704at 2006.770 kb on + strand, within Echvi_1704at 2006.770 kb on + strand, within Echvi_1704at 2006.770 kb on + strand, within Echvi_1704at 2006.770 kb on + strand, within Echvi_1704at 2006.770 kb on + strand, within Echvi_1704at 2006.792 kb on + strand, within Echvi_1704at 2006.792 kb on + strand, within Echvi_1704at 2006.793 kb on - strand, within Echvi_1704at 2006.902 kb on + strandat 2006.902 kb on + strandat 2006.903 kb on - strandat 2006.920 kb on + strandat 2006.920 kb on + strandat 2006.931 kb on + strandat 2006.932 kb on - strandat 2006.932 kb on - strandat 2006.945 kb on - strandat 2006.957 kb on - strandat 2006.968 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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2,002,953 + Echvi_1702 0.68 -0.4
2,002,956 + Echvi_1702 0.68 +1.0
2,002,981 + Echvi_1702 0.69 +0.6
2,002,981 + Echvi_1702 0.69 +1.0
2,002,981 + Echvi_1702 0.69 -0.6
2,002,982 - Echvi_1702 0.70 +0.5
2,002,982 - Echvi_1702 0.70 -1.4
2,002,982 - Echvi_1702 0.70 -1.0
2,002,982 - Echvi_1702 0.70 -0.1
2,002,982 - Echvi_1702 0.70 -0.2
2,002,982 - Echvi_1702 0.70 +1.7
2,002,982 - Echvi_1702 0.70 -1.0
2,002,985 + Echvi_1702 0.70 +0.1
2,002,986 - Echvi_1702 0.70 -0.6
2,003,025 - Echvi_1702 0.71 +0.4
2,003,094 + Echvi_1702 0.74 -1.9
2,003,095 - Echvi_1702 0.74 +1.0
2,003,114 + Echvi_1702 0.75 -0.6
2,003,130 - Echvi_1702 0.76 -1.3
2,003,193 + Echvi_1702 0.78 -0.6
2,003,211 + Echvi_1702 0.79 +0.2
2,003,212 - Echvi_1702 0.79 -1.6
2,003,231 - Echvi_1702 0.80 -0.6
2,003,231 - Echvi_1702 0.80 -2.7
2,003,231 - Echvi_1702 0.80 -0.3
2,003,625 + -0.5
2,003,625 + +0.7
2,003,672 - -2.0
2,003,678 - +0.4
2,003,739 + +0.3
2,003,740 - -0.6
2,003,919 + +0.4
2,003,920 - +0.9
2,003,925 + -1.7
2,003,928 + -0.3
2,003,928 + -0.2
2,003,928 + -1.4
2,003,929 - -1.3
2,003,945 - -1.4
2,003,948 + -1.4
2,003,949 - +0.8
2,004,133 - -1.0
2,004,334 - Echvi_1703 0.20 -0.6
2,004,334 - Echvi_1703 0.20 +0.7
2,004,339 + Echvi_1703 0.20 -1.7
2,004,339 + Echvi_1703 0.20 -1.5
2,004,340 - Echvi_1703 0.20 -1.4
2,004,404 + Echvi_1703 0.23 -0.5
2,004,446 - Echvi_1703 0.25 -0.7
2,004,450 + Echvi_1703 0.25 -0.2
2,004,486 + Echvi_1703 0.27 +3.0
2,004,487 - Echvi_1703 0.27 -0.0
2,004,487 - Echvi_1703 0.27 +0.2
2,004,504 + Echvi_1703 0.28 +0.2
2,004,556 - Echvi_1703 0.31 +0.2
2,004,604 + Echvi_1703 0.33 -0.9
2,004,604 + Echvi_1703 0.33 -0.3
2,004,604 + Echvi_1703 0.33 +0.3
2,004,605 - Echvi_1703 0.33 +0.5
2,004,626 - Echvi_1703 0.34 +0.3
2,004,643 - Echvi_1703 0.35 +1.0
2,004,776 - Echvi_1703 0.41 -0.4
2,004,839 + Echvi_1703 0.44 -1.1
2,004,904 + Echvi_1703 0.48 +0.7
2,004,905 - Echvi_1703 0.48 +0.5
2,004,934 + Echvi_1703 0.49 +0.1
2,004,934 + Echvi_1703 0.49 -0.4
2,004,934 + Echvi_1703 0.49 -1.0
2,004,934 + Echvi_1703 0.49 -0.4
2,004,935 - Echvi_1703 0.49 +0.2
2,004,935 - Echvi_1703 0.49 -1.3
2,004,971 - Echvi_1703 0.51 -0.8
2,005,081 + Echvi_1703 0.56 -0.7
2,005,081 + Echvi_1703 0.56 -0.1
2,005,082 - Echvi_1703 0.56 -0.9
2,005,082 - Echvi_1703 0.56 +0.9
2,005,225 + Echvi_1703 0.63 -0.8
2,005,225 + Echvi_1703 0.63 +0.6
2,005,226 - Echvi_1703 0.63 +0.4
2,005,227 + Echvi_1703 0.63 -0.0
2,005,228 - Echvi_1703 0.64 +0.7
2,005,228 - Echvi_1703 0.64 -2.8
2,005,228 - Echvi_1703 0.64 -1.8
2,005,228 - Echvi_1703 0.64 -0.5
2,005,229 + Echvi_1703 0.64 -2.1
2,005,230 - Echvi_1703 0.64 +0.2
2,005,288 + Echvi_1703 0.66 -0.4
2,005,288 + Echvi_1703 0.66 -0.2
2,005,288 + Echvi_1703 0.66 +0.2
2,005,288 + Echvi_1703 0.66 -1.9
2,005,288 + Echvi_1703 0.66 -1.7
2,005,289 - Echvi_1703 0.67 +0.9
2,005,289 - Echvi_1703 0.67 -0.8
2,005,294 + Echvi_1703 0.67 +1.2
2,005,296 + Echvi_1703 0.67 -0.6
2,005,296 + Echvi_1703 0.67 -0.1
2,005,296 + Echvi_1703 0.67 +0.1
2,005,296 + Echvi_1703 0.67 -1.3
2,005,297 - Echvi_1703 0.67 +0.8
2,005,297 - Echvi_1703 0.67 -1.4
2,005,297 - Echvi_1703 0.67 +0.5
2,005,297 - Echvi_1703 0.67 +0.8
2,005,319 - Echvi_1703 0.68 -2.0
2,005,319 - Echvi_1703 0.68 -2.3
2,005,331 - Echvi_1703 0.69 -0.4
2,005,331 - Echvi_1703 0.69 +0.2
2,005,341 + Echvi_1703 0.69 -2.4
2,005,399 + Echvi_1703 0.72 -0.3
2,005,453 + Echvi_1703 0.75 +0.2
2,005,454 - Echvi_1703 0.75 -0.1
2,005,547 - Echvi_1703 0.79 -1.1
2,005,547 - Echvi_1703 0.79 +0.4
2,005,550 + Echvi_1703 0.79 -0.4
2,005,550 + Echvi_1703 0.79 -2.3
2,005,615 + Echvi_1703 0.82 -0.2
2,005,615 + Echvi_1703 0.82 +0.8
2,005,616 - Echvi_1703 0.83 +0.4
2,005,816 + -1.3
2,005,816 + -0.4
2,005,816 + +0.0
2,005,816 + +1.8
2,005,817 - +0.5
2,005,819 + +1.8
2,005,819 + -0.1
2,005,890 + -1.8
2,005,907 - +0.3
2,005,909 + +0.0
2,005,910 - +0.5
2,005,910 - +0.8
2,005,970 - +0.8
2,006,033 + -0.1
2,006,034 - -1.4
2,006,034 - -1.1
2,006,051 + -2.1
2,006,224 + +0.6
2,006,229 + -0.1
2,006,242 + Echvi_1704 0.10 +0.2
2,006,242 + Echvi_1704 0.10 -0.1
2,006,297 + Echvi_1704 0.18 +2.2
2,006,297 + Echvi_1704 0.18 -0.6
2,006,300 + Echvi_1704 0.19 -0.7
2,006,301 - Echvi_1704 0.19 -2.6
2,006,322 - Echvi_1704 0.22 +1.6
2,006,337 + Echvi_1704 0.24 +0.4
2,006,369 + Echvi_1704 0.29 +1.4
2,006,369 + Echvi_1704 0.29 +1.5
2,006,370 - Echvi_1704 0.29 -0.6
2,006,404 + Echvi_1704 0.33 -1.8
2,006,405 - Echvi_1704 0.34 -0.6
2,006,420 - Echvi_1704 0.36 -2.1
2,006,420 - Echvi_1704 0.36 +0.1
2,006,420 - Echvi_1704 0.36 -0.2
2,006,421 + Echvi_1704 0.36 -1.3
2,006,421 + Echvi_1704 0.36 +1.5
2,006,421 + Echvi_1704 0.36 +1.8
2,006,421 + Echvi_1704 0.36 -0.9
2,006,421 + Echvi_1704 0.36 -0.7
2,006,421 + Echvi_1704 0.36 +0.2
2,006,421 + Echvi_1704 0.36 +1.0
2,006,422 - Echvi_1704 0.36 -0.3
2,006,422 - Echvi_1704 0.36 -1.4
2,006,422 - Echvi_1704 0.36 -1.6
2,006,422 - Echvi_1704 0.36 -1.0
2,006,475 + Echvi_1704 0.44 -1.9
2,006,535 + Echvi_1704 0.52 +0.9
2,006,535 + Echvi_1704 0.52 +0.5
2,006,535 + Echvi_1704 0.52 -0.3
2,006,535 + Echvi_1704 0.52 -0.8
2,006,536 - Echvi_1704 0.52 +0.2
2,006,581 + Echvi_1704 0.59 -0.2
2,006,581 + Echvi_1704 0.59 +1.7
2,006,581 + Echvi_1704 0.59 +0.6
2,006,582 - Echvi_1704 0.59 -0.3
2,006,582 - Echvi_1704 0.59 +1.2
2,006,582 - -0.3
2,006,599 + Echvi_1704 0.61 -0.3
2,006,623 + Echvi_1704 0.65 +0.7
2,006,623 + Echvi_1704 0.65 -1.4
2,006,627 - Echvi_1704 0.65 +0.3
2,006,627 - Echvi_1704 0.65 +0.9
2,006,627 - Echvi_1704 0.65 +1.2
2,006,635 + Echvi_1704 0.66 -0.1
2,006,636 - Echvi_1704 0.66 -0.1
2,006,659 + Echvi_1704 0.70 +0.1
2,006,705 + Echvi_1704 0.76 -0.1
2,006,706 - Echvi_1704 0.76 -0.3
2,006,770 + Echvi_1704 0.85 -0.2
2,006,770 + Echvi_1704 0.85 -0.6
2,006,770 + Echvi_1704 0.85 -1.1
2,006,770 + Echvi_1704 0.85 -2.6
2,006,770 + Echvi_1704 0.85 +0.6
2,006,770 + Echvi_1704 0.85 -2.2
2,006,792 + Echvi_1704 0.89 +0.7
2,006,792 + Echvi_1704 0.89 -1.8
2,006,793 - Echvi_1704 0.89 +0.3
2,006,902 + -0.2
2,006,902 + +0.5
2,006,903 - -0.0
2,006,920 + -0.8
2,006,920 + -2.1
2,006,931 + -0.8
2,006,932 - +1.0
2,006,932 - +0.6
2,006,945 - -0.9
2,006,957 - +1.5
2,006,968 - +0.5

Or see this region's nucleotide sequence