Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2149

Experiment: m.b. syringaldehyde 1 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2148 and B158DRAFT_2149 are separated by 169 nucleotidesB158DRAFT_2149 and B158DRAFT_2150 are separated by 148 nucleotides B158DRAFT_2148: B158DRAFT_2148 - Predicted permeases, at 285,071 to 286,009 _2148 B158DRAFT_2149: B158DRAFT_2149 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 286,179 to 288,437 _2149 B158DRAFT_2150: B158DRAFT_2150 - Glucose/sorbosone dehydrogenases, at 288,586 to 289,671 _2150 Position (kb) 286 287 288 289Strain fitness (log2 ratio) -2 -1 0 1at 285.189 kb on + strand, within B158DRAFT_2148at 285.346 kb on + strand, within B158DRAFT_2148at 285.346 kb on + strand, within B158DRAFT_2148at 285.368 kb on + strand, within B158DRAFT_2148at 285.376 kb on - strand, within B158DRAFT_2148at 285.378 kb on + strand, within B158DRAFT_2148at 285.390 kb on + strand, within B158DRAFT_2148at 285.393 kb on - strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.395 kb on + strand, within B158DRAFT_2148at 285.403 kb on - strand, within B158DRAFT_2148at 285.403 kb on - strand, within B158DRAFT_2148at 285.403 kb on - strand, within B158DRAFT_2148at 285.403 kb on - strand, within B158DRAFT_2148at 285.403 kb on - strand, within B158DRAFT_2148at 285.403 kb on - strand, within B158DRAFT_2148at 285.403 kb on - strand, within B158DRAFT_2148at 285.431 kb on + strand, within B158DRAFT_2148at 285.434 kb on - strand, within B158DRAFT_2148at 285.444 kb on - strand, within B158DRAFT_2148at 285.484 kb on - strand, within B158DRAFT_2148at 285.545 kb on - strand, within B158DRAFT_2148at 285.674 kb on + strand, within B158DRAFT_2148at 285.682 kb on - strand, within B158DRAFT_2148at 285.695 kb on + strand, within B158DRAFT_2148at 285.705 kb on - strand, within B158DRAFT_2148at 285.721 kb on + strand, within B158DRAFT_2148at 285.729 kb on - strand, within B158DRAFT_2148at 285.940 kb on - strandat 285.940 kb on - strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.942 kb on + strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 285.950 kb on - strandat 286.012 kb on - strandat 286.048 kb on + strandat 286.048 kb on + strandat 286.056 kb on - strandat 286.059 kb on + strandat 286.107 kb on + strandat 286.252 kb on - strandat 286.267 kb on - strandat 286.278 kb on + strandat 286.280 kb on + strandat 286.285 kb on + strandat 286.295 kb on + strandat 286.303 kb on - strandat 286.303 kb on - strandat 286.379 kb on + strandat 286.387 kb on - strandat 286.387 kb on - strandat 286.387 kb on - strandat 286.387 kb on - strandat 286.416 kb on + strand, within B158DRAFT_2149at 286.416 kb on + strand, within B158DRAFT_2149at 286.423 kb on + strand, within B158DRAFT_2149at 286.469 kb on + strand, within B158DRAFT_2149at 286.484 kb on - strand, within B158DRAFT_2149at 286.493 kb on - strand, within B158DRAFT_2149at 286.575 kb on + strand, within B158DRAFT_2149at 286.583 kb on - strand, within B158DRAFT_2149at 286.667 kb on + strand, within B158DRAFT_2149at 286.686 kb on - strand, within B158DRAFT_2149at 286.688 kb on + strand, within B158DRAFT_2149at 286.696 kb on - strand, within B158DRAFT_2149at 286.769 kb on + strand, within B158DRAFT_2149at 286.856 kb on - strand, within B158DRAFT_2149at 287.143 kb on + strand, within B158DRAFT_2149at 287.188 kb on - strand, within B158DRAFT_2149at 287.232 kb on + strand, within B158DRAFT_2149at 287.240 kb on - strand, within B158DRAFT_2149at 287.240 kb on - strand, within B158DRAFT_2149at 287.280 kb on - strand, within B158DRAFT_2149at 287.425 kb on - strand, within B158DRAFT_2149at 287.440 kb on - strand, within B158DRAFT_2149at 287.572 kb on - strand, within B158DRAFT_2149at 287.589 kb on + strand, within B158DRAFT_2149at 287.597 kb on - strand, within B158DRAFT_2149at 287.630 kb on + strand, within B158DRAFT_2149at 287.690 kb on + strand, within B158DRAFT_2149at 287.690 kb on + strand, within B158DRAFT_2149at 287.698 kb on - strand, within B158DRAFT_2149at 287.698 kb on - strand, within B158DRAFT_2149at 287.706 kb on + strand, within B158DRAFT_2149at 287.742 kb on - strand, within B158DRAFT_2149at 287.742 kb on - strand, within B158DRAFT_2149at 287.781 kb on + strand, within B158DRAFT_2149at 287.800 kb on + strand, within B158DRAFT_2149at 287.984 kb on - strand, within B158DRAFT_2149at 287.999 kb on + strand, within B158DRAFT_2149at 288.112 kb on - strand, within B158DRAFT_2149at 288.142 kb on - strand, within B158DRAFT_2149at 288.163 kb on - strand, within B158DRAFT_2149at 288.168 kb on - strand, within B158DRAFT_2149at 288.198 kb on - strand, within B158DRAFT_2149at 288.297 kb on - strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.299 kb on + strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.307 kb on - strandat 288.309 kb on + strandat 288.395 kb on + strandat 288.395 kb on + strandat 288.398 kb on - strandat 288.403 kb on - strandat 288.513 kb on + strandat 288.547 kb on + strandat 288.619 kb on + strandat 288.671 kb on - strandat 288.799 kb on - strand, within B158DRAFT_2150at 289.142 kb on - strand, within B158DRAFT_2150at 289.142 kb on - strand, within B158DRAFT_2150at 289.156 kb on - strand, within B158DRAFT_2150at 289.218 kb on + strand, within B158DRAFT_2150at 289.218 kb on + strand, within B158DRAFT_2150at 289.286 kb on + strand, within B158DRAFT_2150at 289.292 kb on - strand, within B158DRAFT_2150at 289.336 kb on - strand, within B158DRAFT_2150at 289.336 kb on - strand, within B158DRAFT_2150at 289.338 kb on + strand, within B158DRAFT_2150at 289.399 kb on + strand, within B158DRAFT_2150

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 1 mM
remove
285,189 + B158DRAFT_2148 0.13 -0.1
285,346 + B158DRAFT_2148 0.29 -0.2
285,346 + B158DRAFT_2148 0.29 +0.1
285,368 + B158DRAFT_2148 0.32 +0.6
285,376 - B158DRAFT_2148 0.32 -0.1
285,378 + B158DRAFT_2148 0.33 -0.4
285,390 + B158DRAFT_2148 0.34 -0.0
285,393 - B158DRAFT_2148 0.34 -0.4
285,395 + B158DRAFT_2148 0.35 -0.3
285,395 + B158DRAFT_2148 0.35 -0.3
285,395 + B158DRAFT_2148 0.35 -0.3
285,395 + B158DRAFT_2148 0.35 -0.0
285,395 + B158DRAFT_2148 0.35 -0.1
285,395 + B158DRAFT_2148 0.35 +0.1
285,395 + B158DRAFT_2148 0.35 -0.3
285,395 + B158DRAFT_2148 0.35 -0.2
285,395 + B158DRAFT_2148 0.35 -0.7
285,395 + B158DRAFT_2148 0.35 +0.1
285,395 + B158DRAFT_2148 0.35 -0.3
285,395 + B158DRAFT_2148 0.35 -0.5
285,395 + B158DRAFT_2148 0.35 -0.1
285,403 - B158DRAFT_2148 0.35 +0.1
285,403 - B158DRAFT_2148 0.35 -0.2
285,403 - B158DRAFT_2148 0.35 +0.3
285,403 - B158DRAFT_2148 0.35 -0.2
285,403 - B158DRAFT_2148 0.35 -0.2
285,403 - B158DRAFT_2148 0.35 +0.1
285,403 - B158DRAFT_2148 0.35 -0.0
285,431 + B158DRAFT_2148 0.38 -0.1
285,434 - B158DRAFT_2148 0.39 -0.2
285,444 - B158DRAFT_2148 0.40 -0.3
285,484 - B158DRAFT_2148 0.44 +0.7
285,545 - B158DRAFT_2148 0.50 +0.0
285,674 + B158DRAFT_2148 0.64 +0.1
285,682 - B158DRAFT_2148 0.65 -0.1
285,695 + B158DRAFT_2148 0.66 +0.4
285,705 - B158DRAFT_2148 0.68 +0.2
285,721 + B158DRAFT_2148 0.69 -0.1
285,729 - B158DRAFT_2148 0.70 -0.3
285,940 - +0.5
285,940 - -0.4
285,942 + +0.0
285,942 + -0.2
285,942 + +0.1
285,942 + +0.1
285,942 + -0.1
285,942 + -1.3
285,942 + -0.3
285,942 + -0.4
285,942 + +0.4
285,942 + -0.3
285,942 + -1.8
285,942 + +0.0
285,942 + -0.3
285,942 + +0.1
285,942 + -0.2
285,942 + -0.2
285,942 + +0.2
285,942 + +0.4
285,942 + +0.3
285,942 + -0.1
285,950 - +0.2
285,950 - +0.1
285,950 - -1.3
285,950 - +0.0
285,950 - +0.1
285,950 - -0.2
285,950 - -0.1
285,950 - -1.2
285,950 - +0.1
285,950 - +0.4
286,012 - +0.3
286,048 + -0.2
286,048 + -0.3
286,056 - +0.1
286,059 + -0.7
286,107 + -0.3
286,252 - +0.0
286,267 - +0.7
286,278 + +0.3
286,280 + -0.2
286,285 + -0.1
286,295 + +0.2
286,303 - -0.0
286,303 - -0.0
286,379 + -0.1
286,387 - -0.1
286,387 - +0.6
286,387 - -0.1
286,387 - -0.3
286,416 + B158DRAFT_2149 0.10 -0.0
286,416 + B158DRAFT_2149 0.10 +0.5
286,423 + B158DRAFT_2149 0.11 -0.4
286,469 + B158DRAFT_2149 0.13 -0.1
286,484 - B158DRAFT_2149 0.14 +0.4
286,493 - B158DRAFT_2149 0.14 -0.2
286,575 + B158DRAFT_2149 0.18 +0.2
286,583 - B158DRAFT_2149 0.18 -0.1
286,667 + B158DRAFT_2149 0.22 -0.3
286,686 - B158DRAFT_2149 0.22 +0.2
286,688 + B158DRAFT_2149 0.23 +0.2
286,696 - B158DRAFT_2149 0.23 -0.2
286,769 + B158DRAFT_2149 0.26 +0.0
286,856 - B158DRAFT_2149 0.30 -0.4
287,143 + B158DRAFT_2149 0.43 -0.2
287,188 - B158DRAFT_2149 0.45 +0.2
287,232 + B158DRAFT_2149 0.47 -0.1
287,240 - B158DRAFT_2149 0.47 +0.4
287,240 - B158DRAFT_2149 0.47 -0.0
287,280 - B158DRAFT_2149 0.49 +0.4
287,425 - B158DRAFT_2149 0.55 -0.6
287,440 - B158DRAFT_2149 0.56 -0.5
287,572 - B158DRAFT_2149 0.62 -0.1
287,589 + B158DRAFT_2149 0.62 -0.6
287,597 - B158DRAFT_2149 0.63 +0.4
287,630 + B158DRAFT_2149 0.64 -1.1
287,690 + B158DRAFT_2149 0.67 -0.5
287,690 + B158DRAFT_2149 0.67 -0.1
287,698 - B158DRAFT_2149 0.67 -0.2
287,698 - B158DRAFT_2149 0.67 -0.2
287,706 + B158DRAFT_2149 0.68 +0.4
287,742 - B158DRAFT_2149 0.69 -0.3
287,742 - B158DRAFT_2149 0.69 +0.3
287,781 + B158DRAFT_2149 0.71 +0.1
287,800 + B158DRAFT_2149 0.72 -0.0
287,984 - B158DRAFT_2149 0.80 -0.2
287,999 + B158DRAFT_2149 0.81 +0.0
288,112 - B158DRAFT_2149 0.86 -0.3
288,142 - B158DRAFT_2149 0.87 +0.0
288,163 - B158DRAFT_2149 0.88 +0.3
288,168 - B158DRAFT_2149 0.88 -0.2
288,198 - B158DRAFT_2149 0.89 -0.4
288,297 - +0.0
288,299 + -0.4
288,299 + -0.2
288,299 + -0.2
288,299 + +0.1
288,299 + +0.0
288,299 + -0.0
288,307 - +0.0
288,307 - -0.3
288,307 - +0.1
288,307 - +0.3
288,307 - +0.2
288,309 + -0.1
288,395 + -0.0
288,395 + +0.2
288,398 - -0.6
288,403 - +0.1
288,513 + -0.7
288,547 + +0.2
288,619 + +0.2
288,671 - -0.1
288,799 - B158DRAFT_2150 0.20 -0.2
289,142 - B158DRAFT_2150 0.51 -0.1
289,142 - B158DRAFT_2150 0.51 +0.2
289,156 - B158DRAFT_2150 0.52 +0.1
289,218 + B158DRAFT_2150 0.58 -0.1
289,218 + B158DRAFT_2150 0.58 -0.4
289,286 + B158DRAFT_2150 0.64 +0.1
289,292 - B158DRAFT_2150 0.65 +0.6
289,336 - B158DRAFT_2150 0.69 +0.0
289,336 - B158DRAFT_2150 0.69 -0.1
289,338 + B158DRAFT_2150 0.69 +0.3
289,399 + B158DRAFT_2150 0.75 -0.1

Or see this region's nucleotide sequence