Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2142

Experiment: m.b. syringaldehyde 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2140 and B158DRAFT_2141 are separated by 113 nucleotidesB158DRAFT_2141 and B158DRAFT_2142 are separated by 6 nucleotidesB158DRAFT_2142 and B158DRAFT_2143 are separated by 105 nucleotides B158DRAFT_2140: B158DRAFT_2140 - type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A, at 274,898 to 275,806 _2140 B158DRAFT_2141: B158DRAFT_2141 - dephospho-CoA kinase, at 275,920 to 276,519 _2141 B158DRAFT_2142: B158DRAFT_2142 - Uncharacterized protein conserved in bacteria, at 276,526 to 277,293 _2142 B158DRAFT_2143: B158DRAFT_2143 - Membrane protein required for beta-lactamase induction, at 277,399 to 278,268 _2143 Position (kb) 276 277 278Strain fitness (log2 ratio) -2 -1 0 1at 275.750 kb on + strandat 275.847 kb on + strandat 275.872 kb on + strandat 275.872 kb on + strandat 275.872 kb on + strandat 275.882 kb on + strandat 275.882 kb on + strandat 276.550 kb on - strandat 276.550 kb on - strandat 276.576 kb on + strandat 276.576 kb on + strandat 276.632 kb on + strand, within B158DRAFT_2142at 276.682 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.692 kb on + strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.700 kb on - strand, within B158DRAFT_2142at 276.723 kb on + strand, within B158DRAFT_2142at 276.731 kb on - strand, within B158DRAFT_2142at 276.731 kb on - strand, within B158DRAFT_2142at 276.731 kb on - strand, within B158DRAFT_2142at 276.795 kb on + strand, within B158DRAFT_2142at 276.796 kb on - strand, within B158DRAFT_2142at 276.816 kb on + strand, within B158DRAFT_2142at 276.871 kb on - strand, within B158DRAFT_2142at 276.935 kb on + strand, within B158DRAFT_2142at 276.935 kb on + strand, within B158DRAFT_2142at 276.935 kb on + strand, within B158DRAFT_2142at 276.943 kb on - strand, within B158DRAFT_2142at 276.943 kb on - strand, within B158DRAFT_2142at 276.943 kb on - strand, within B158DRAFT_2142at 276.967 kb on - strand, within B158DRAFT_2142at 276.988 kb on - strand, within B158DRAFT_2142at 277.025 kb on + strand, within B158DRAFT_2142at 277.045 kb on + strand, within B158DRAFT_2142at 277.077 kb on + strand, within B158DRAFT_2142at 277.103 kb on + strand, within B158DRAFT_2142at 277.103 kb on + strand, within B158DRAFT_2142at 277.103 kb on + strand, within B158DRAFT_2142at 277.111 kb on - strand, within B158DRAFT_2142at 277.111 kb on - strand, within B158DRAFT_2142at 277.113 kb on + strand, within B158DRAFT_2142at 277.184 kb on - strand, within B158DRAFT_2142at 277.216 kb on - strand, within B158DRAFT_2142at 277.216 kb on - strand, within B158DRAFT_2142at 277.238 kb on - strandat 277.243 kb on + strandat 277.261 kb on + strandat 277.279 kb on - strandat 277.307 kb on + strandat 277.307 kb on + strandat 277.307 kb on + strandat 277.315 kb on - strandat 277.315 kb on - strandat 277.315 kb on - strandat 277.315 kb on - strandat 277.315 kb on - strandat 277.390 kb on + strandat 277.398 kb on - strandat 277.476 kb on - strandat 277.484 kb on - strandat 277.521 kb on - strand, within B158DRAFT_2143at 277.539 kb on + strand, within B158DRAFT_2143at 277.547 kb on - strand, within B158DRAFT_2143at 277.547 kb on - strand, within B158DRAFT_2143at 277.569 kb on - strand, within B158DRAFT_2143at 277.578 kb on + strand, within B158DRAFT_2143at 277.649 kb on + strand, within B158DRAFT_2143at 277.662 kb on - strand, within B158DRAFT_2143at 277.688 kb on + strand, within B158DRAFT_2143at 277.742 kb on + strand, within B158DRAFT_2143at 277.754 kb on + strand, within B158DRAFT_2143at 277.756 kb on + strand, within B158DRAFT_2143at 277.804 kb on + strand, within B158DRAFT_2143at 277.890 kb on - strand, within B158DRAFT_2143at 277.895 kb on - strand, within B158DRAFT_2143at 277.906 kb on + strand, within B158DRAFT_2143at 277.906 kb on + strand, within B158DRAFT_2143at 277.906 kb on + strand, within B158DRAFT_2143at 277.906 kb on + strand, within B158DRAFT_2143at 277.914 kb on - strand, within B158DRAFT_2143at 277.914 kb on - strand, within B158DRAFT_2143at 277.914 kb on - strand, within B158DRAFT_2143at 277.914 kb on - strand, within B158DRAFT_2143at 277.944 kb on + strand, within B158DRAFT_2143at 277.953 kb on + strand, within B158DRAFT_2143at 277.961 kb on - strand, within B158DRAFT_2143at 277.966 kb on + strand, within B158DRAFT_2143at 277.966 kb on + strand, within B158DRAFT_2143at 277.974 kb on - strand, within B158DRAFT_2143at 277.978 kb on + strand, within B158DRAFT_2143at 277.983 kb on + strand, within B158DRAFT_2143at 277.983 kb on + strand, within B158DRAFT_2143at 277.983 kb on + strand, within B158DRAFT_2143at 277.984 kb on - strand, within B158DRAFT_2143at 277.996 kb on - strand, within B158DRAFT_2143at 277.996 kb on - strand, within B158DRAFT_2143at 277.996 kb on - strand, within B158DRAFT_2143at 277.996 kb on - strand, within B158DRAFT_2143at 278.016 kb on - strand, within B158DRAFT_2143at 278.087 kb on + strand, within B158DRAFT_2143at 278.134 kb on + strand, within B158DRAFT_2143at 278.134 kb on + strand, within B158DRAFT_2143at 278.134 kb on + strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.142 kb on - strand, within B158DRAFT_2143at 278.186 kb on + strandat 278.186 kb on + strandat 278.194 kb on - strandat 278.226 kb on - strandat 278.280 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 1 mM
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275,750 + -1.0
275,847 + -0.6
275,872 + -0.3
275,872 + -0.6
275,872 + -0.0
275,882 + -0.3
275,882 + -0.1
276,550 - -0.0
276,550 - -0.2
276,576 + -0.2
276,576 + -0.1
276,632 + B158DRAFT_2142 0.14 -0.2
276,682 + B158DRAFT_2142 0.20 +1.0
276,692 + B158DRAFT_2142 0.22 +0.0
276,692 + B158DRAFT_2142 0.22 +0.4
276,692 + B158DRAFT_2142 0.22 -0.3
276,692 + B158DRAFT_2142 0.22 +0.1
276,692 + B158DRAFT_2142 0.22 +0.0
276,692 + B158DRAFT_2142 0.22 -0.0
276,692 + B158DRAFT_2142 0.22 -0.3
276,692 + B158DRAFT_2142 0.22 +0.1
276,692 + B158DRAFT_2142 0.22 -0.5
276,692 + B158DRAFT_2142 0.22 -0.1
276,692 + B158DRAFT_2142 0.22 -0.2
276,692 + B158DRAFT_2142 0.22 +0.1
276,692 + B158DRAFT_2142 0.22 +0.2
276,692 + B158DRAFT_2142 0.22 +0.3
276,692 + B158DRAFT_2142 0.22 -0.7
276,692 + B158DRAFT_2142 0.22 -0.1
276,700 - B158DRAFT_2142 0.23 -0.3
276,700 - B158DRAFT_2142 0.23 +0.0
276,700 - B158DRAFT_2142 0.23 -0.5
276,700 - B158DRAFT_2142 0.23 -0.0
276,700 - B158DRAFT_2142 0.23 -0.1
276,700 - B158DRAFT_2142 0.23 -0.3
276,700 - B158DRAFT_2142 0.23 +0.0
276,700 - B158DRAFT_2142 0.23 +0.1
276,700 - B158DRAFT_2142 0.23 +0.2
276,700 - B158DRAFT_2142 0.23 -0.1
276,700 - B158DRAFT_2142 0.23 +0.1
276,700 - B158DRAFT_2142 0.23 +0.3
276,700 - B158DRAFT_2142 0.23 -0.1
276,700 - B158DRAFT_2142 0.23 +0.1
276,700 - B158DRAFT_2142 0.23 -0.1
276,700 - B158DRAFT_2142 0.23 -0.1
276,700 - B158DRAFT_2142 0.23 -0.2
276,700 - B158DRAFT_2142 0.23 +0.0
276,700 - B158DRAFT_2142 0.23 +0.8
276,700 - B158DRAFT_2142 0.23 +0.1
276,700 - B158DRAFT_2142 0.23 -0.1
276,700 - B158DRAFT_2142 0.23 +1.4
276,700 - B158DRAFT_2142 0.23 -0.1
276,700 - B158DRAFT_2142 0.23 -1.3
276,723 + B158DRAFT_2142 0.26 +1.1
276,731 - B158DRAFT_2142 0.27 +0.1
276,731 - B158DRAFT_2142 0.27 -0.0
276,731 - B158DRAFT_2142 0.27 -2.1
276,795 + B158DRAFT_2142 0.35 +0.3
276,796 - B158DRAFT_2142 0.35 -0.2
276,816 + B158DRAFT_2142 0.38 +0.2
276,871 - B158DRAFT_2142 0.45 +0.1
276,935 + B158DRAFT_2142 0.53 +0.1
276,935 + B158DRAFT_2142 0.53 -0.4
276,935 + B158DRAFT_2142 0.53 +0.6
276,943 - B158DRAFT_2142 0.54 +0.2
276,943 - B158DRAFT_2142 0.54 +0.1
276,943 - B158DRAFT_2142 0.54 -0.1
276,967 - B158DRAFT_2142 0.57 +0.1
276,988 - B158DRAFT_2142 0.60 -0.2
277,025 + B158DRAFT_2142 0.65 +0.1
277,045 + B158DRAFT_2142 0.68 +0.2
277,077 + B158DRAFT_2142 0.72 -1.6
277,103 + B158DRAFT_2142 0.75 +0.3
277,103 + B158DRAFT_2142 0.75 -0.1
277,103 + B158DRAFT_2142 0.75 -0.0
277,111 - B158DRAFT_2142 0.76 -0.4
277,111 - B158DRAFT_2142 0.76 -0.1
277,113 + B158DRAFT_2142 0.76 -0.1
277,184 - B158DRAFT_2142 0.86 -0.6
277,216 - B158DRAFT_2142 0.90 -0.1
277,216 - B158DRAFT_2142 0.90 -0.1
277,238 - -0.2
277,243 + -0.3
277,261 + +0.2
277,279 - -0.0
277,307 + -0.1
277,307 + -0.2
277,307 + +0.2
277,315 - -0.2
277,315 - +0.2
277,315 - -0.1
277,315 - +0.4
277,315 - +0.2
277,390 + -0.2
277,398 - -0.9
277,476 - +0.9
277,484 - -0.4
277,521 - B158DRAFT_2143 0.14 -0.2
277,539 + B158DRAFT_2143 0.16 +0.1
277,547 - B158DRAFT_2143 0.17 +0.4
277,547 - B158DRAFT_2143 0.17 +0.4
277,569 - B158DRAFT_2143 0.20 +0.3
277,578 + B158DRAFT_2143 0.21 -0.1
277,649 + B158DRAFT_2143 0.29 -0.3
277,662 - B158DRAFT_2143 0.30 -0.2
277,688 + B158DRAFT_2143 0.33 -0.6
277,742 + B158DRAFT_2143 0.39 -0.3
277,754 + B158DRAFT_2143 0.41 +0.1
277,756 + B158DRAFT_2143 0.41 +0.0
277,804 + B158DRAFT_2143 0.47 -0.6
277,890 - B158DRAFT_2143 0.56 -0.2
277,895 - B158DRAFT_2143 0.57 -0.2
277,906 + B158DRAFT_2143 0.58 -0.9
277,906 + B158DRAFT_2143 0.58 -0.3
277,906 + B158DRAFT_2143 0.58 +0.8
277,906 + B158DRAFT_2143 0.58 -0.1
277,914 - B158DRAFT_2143 0.59 -0.9
277,914 - B158DRAFT_2143 0.59 -0.6
277,914 - B158DRAFT_2143 0.59 -0.3
277,914 - B158DRAFT_2143 0.59 -0.5
277,944 + B158DRAFT_2143 0.63 -0.2
277,953 + B158DRAFT_2143 0.64 +0.0
277,961 - B158DRAFT_2143 0.65 -0.2
277,966 + B158DRAFT_2143 0.65 -0.6
277,966 + B158DRAFT_2143 0.65 -0.1
277,974 - B158DRAFT_2143 0.66 -0.1
277,978 + B158DRAFT_2143 0.67 -0.2
277,983 + B158DRAFT_2143 0.67 +0.4
277,983 + B158DRAFT_2143 0.67 -0.3
277,983 + B158DRAFT_2143 0.67 -0.1
277,984 - B158DRAFT_2143 0.67 -0.2
277,996 - B158DRAFT_2143 0.69 +0.0
277,996 - B158DRAFT_2143 0.69 -0.3
277,996 - B158DRAFT_2143 0.69 -0.1
277,996 - B158DRAFT_2143 0.69 -0.2
278,016 - B158DRAFT_2143 0.71 -0.1
278,087 + B158DRAFT_2143 0.79 +0.4
278,134 + B158DRAFT_2143 0.84 +0.5
278,134 + B158DRAFT_2143 0.84 -0.3
278,134 + B158DRAFT_2143 0.84 -0.1
278,142 - B158DRAFT_2143 0.85 -0.1
278,142 - B158DRAFT_2143 0.85 -0.2
278,142 - B158DRAFT_2143 0.85 +0.2
278,142 - B158DRAFT_2143 0.85 -0.6
278,142 - B158DRAFT_2143 0.85 -0.1
278,142 - B158DRAFT_2143 0.85 -0.1
278,142 - B158DRAFT_2143 0.85 -0.0
278,142 - B158DRAFT_2143 0.85 +0.1
278,186 + -0.1
278,186 + -0.2
278,194 - -0.1
278,226 - +0.1
278,280 - +0.3

Or see this region's nucleotide sequence