Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0941

Experiment: m.b. syringaldehyde 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0940 and B158DRAFT_0941 are separated by 8 nucleotidesB158DRAFT_0941 and B158DRAFT_0942 are separated by 97 nucleotides B158DRAFT_0940: B158DRAFT_0940 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 967,792 to 968,916 _0940 B158DRAFT_0941: B158DRAFT_0941 - S-formylglutathione hydrolase, at 968,925 to 969,761 _0941 B158DRAFT_0942: B158DRAFT_0942 - Nitric oxide reductase large subunit, at 969,859 to 972,138 _0942 Position (kb) 968 969 970Strain fitness (log2 ratio) -2 -1 0 1at 967.931 kb on - strand, within B158DRAFT_0940at 967.931 kb on - strand, within B158DRAFT_0940at 967.944 kb on - strand, within B158DRAFT_0940at 968.026 kb on + strand, within B158DRAFT_0940at 968.026 kb on + strand, within B158DRAFT_0940at 968.034 kb on - strand, within B158DRAFT_0940at 968.034 kb on - strand, within B158DRAFT_0940at 968.036 kb on + strand, within B158DRAFT_0940at 968.036 kb on + strand, within B158DRAFT_0940at 968.044 kb on - strand, within B158DRAFT_0940at 968.044 kb on - strand, within B158DRAFT_0940at 968.044 kb on - strand, within B158DRAFT_0940at 968.080 kb on - strand, within B158DRAFT_0940at 968.176 kb on - strand, within B158DRAFT_0940at 968.216 kb on - strand, within B158DRAFT_0940at 968.317 kb on - strand, within B158DRAFT_0940at 968.338 kb on + strand, within B158DRAFT_0940at 968.340 kb on + strand, within B158DRAFT_0940at 968.346 kb on - strand, within B158DRAFT_0940at 968.346 kb on - strand, within B158DRAFT_0940at 968.346 kb on - strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.396 kb on + strand, within B158DRAFT_0940at 968.398 kb on + strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.404 kb on - strand, within B158DRAFT_0940at 968.459 kb on + strand, within B158DRAFT_0940at 968.612 kb on - strand, within B158DRAFT_0940at 968.623 kb on + strand, within B158DRAFT_0940at 968.631 kb on - strand, within B158DRAFT_0940at 968.631 kb on - strand, within B158DRAFT_0940at 968.631 kb on - strand, within B158DRAFT_0940at 968.652 kb on - strand, within B158DRAFT_0940at 968.765 kb on + strand, within B158DRAFT_0940at 968.770 kb on + strand, within B158DRAFT_0940at 968.773 kb on - strand, within B158DRAFT_0940at 968.831 kb on - strandat 968.884 kb on + strandat 968.923 kb on + strandat 969.089 kb on + strand, within B158DRAFT_0941at 969.089 kb on + strand, within B158DRAFT_0941at 969.089 kb on + strand, within B158DRAFT_0941at 969.089 kb on + strand, within B158DRAFT_0941at 969.097 kb on - strand, within B158DRAFT_0941at 969.097 kb on - strand, within B158DRAFT_0941at 969.097 kb on - strand, within B158DRAFT_0941at 969.119 kb on + strand, within B158DRAFT_0941at 969.152 kb on - strand, within B158DRAFT_0941at 969.221 kb on + strand, within B158DRAFT_0941at 969.371 kb on - strand, within B158DRAFT_0941at 969.507 kb on - strand, within B158DRAFT_0941at 969.507 kb on - strand, within B158DRAFT_0941at 969.522 kb on + strand, within B158DRAFT_0941at 969.530 kb on - strand, within B158DRAFT_0941at 969.607 kb on - strand, within B158DRAFT_0941at 969.614 kb on + strand, within B158DRAFT_0941at 969.614 kb on + strand, within B158DRAFT_0941at 969.614 kb on + strand, within B158DRAFT_0941at 969.622 kb on - strand, within B158DRAFT_0941at 969.622 kb on - strand, within B158DRAFT_0941at 969.690 kb on + strandat 969.745 kb on - strandat 969.796 kb on + strandat 969.814 kb on - strandat 969.877 kb on - strandat 969.898 kb on + strandat 969.921 kb on - strandat 969.938 kb on - strandat 969.938 kb on - strandat 969.980 kb on + strandat 969.988 kb on - strandat 969.996 kb on + strandat 970.000 kb on + strandat 970.006 kb on - strandat 970.026 kb on - strandat 970.042 kb on + strandat 970.080 kb on + strandat 970.083 kb on - strandat 970.109 kb on + strand, within B158DRAFT_0942at 970.109 kb on + strand, within B158DRAFT_0942at 970.114 kb on + strand, within B158DRAFT_0942at 970.117 kb on - strand, within B158DRAFT_0942at 970.119 kb on + strand, within B158DRAFT_0942at 970.122 kb on - strand, within B158DRAFT_0942at 970.127 kb on - strand, within B158DRAFT_0942at 970.237 kb on + strand, within B158DRAFT_0942at 970.237 kb on + strand, within B158DRAFT_0942at 970.237 kb on + strand, within B158DRAFT_0942at 970.245 kb on - strand, within B158DRAFT_0942at 970.245 kb on - strand, within B158DRAFT_0942at 970.265 kb on - strand, within B158DRAFT_0942at 970.269 kb on + strand, within B158DRAFT_0942at 970.277 kb on - strand, within B158DRAFT_0942at 970.279 kb on - strand, within B158DRAFT_0942at 970.296 kb on - strand, within B158DRAFT_0942at 970.377 kb on - strand, within B158DRAFT_0942at 970.393 kb on + strand, within B158DRAFT_0942at 970.393 kb on + strand, within B158DRAFT_0942at 970.401 kb on - strand, within B158DRAFT_0942at 970.434 kb on + strand, within B158DRAFT_0942at 970.459 kb on - strand, within B158DRAFT_0942at 970.546 kb on - strand, within B158DRAFT_0942at 970.558 kb on - strand, within B158DRAFT_0942at 970.614 kb on + strand, within B158DRAFT_0942at 970.614 kb on + strand, within B158DRAFT_0942at 970.617 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.622 kb on - strand, within B158DRAFT_0942at 970.624 kb on + strand, within B158DRAFT_0942at 970.659 kb on - strand, within B158DRAFT_0942at 970.669 kb on + strand, within B158DRAFT_0942at 970.669 kb on + strand, within B158DRAFT_0942at 970.676 kb on + strand, within B158DRAFT_0942at 970.684 kb on - strand, within B158DRAFT_0942at 970.689 kb on - strand, within B158DRAFT_0942at 970.728 kb on - strand, within B158DRAFT_0942at 970.741 kb on + strand, within B158DRAFT_0942at 970.749 kb on - strand, within B158DRAFT_0942at 970.754 kb on - strand, within B158DRAFT_0942at 970.754 kb on - strand, within B158DRAFT_0942at 970.754 kb on - strand, within B158DRAFT_0942

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 1 mM
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967,931 - B158DRAFT_0940 0.12 +0.3
967,931 - B158DRAFT_0940 0.12 -0.0
967,944 - B158DRAFT_0940 0.14 +0.1
968,026 + B158DRAFT_0940 0.21 +0.0
968,026 + B158DRAFT_0940 0.21 -0.1
968,034 - B158DRAFT_0940 0.22 -0.4
968,034 - B158DRAFT_0940 0.22 -0.3
968,036 + B158DRAFT_0940 0.22 -0.1
968,036 + B158DRAFT_0940 0.22 -0.0
968,044 - B158DRAFT_0940 0.22 -0.4
968,044 - B158DRAFT_0940 0.22 -0.4
968,044 - B158DRAFT_0940 0.22 +0.0
968,080 - B158DRAFT_0940 0.26 -0.0
968,176 - B158DRAFT_0940 0.34 +0.1
968,216 - B158DRAFT_0940 0.38 -0.9
968,317 - B158DRAFT_0940 0.47 +0.0
968,338 + B158DRAFT_0940 0.49 -0.0
968,340 + B158DRAFT_0940 0.49 +0.1
968,346 - B158DRAFT_0940 0.49 -0.1
968,346 - B158DRAFT_0940 0.49 -0.1
968,346 - B158DRAFT_0940 0.49 -0.4
968,396 + B158DRAFT_0940 0.54 +0.1
968,396 + B158DRAFT_0940 0.54 -0.3
968,396 + B158DRAFT_0940 0.54 -0.4
968,396 + B158DRAFT_0940 0.54 -0.4
968,396 + B158DRAFT_0940 0.54 +0.1
968,396 + B158DRAFT_0940 0.54 -0.3
968,396 + B158DRAFT_0940 0.54 -0.3
968,396 + B158DRAFT_0940 0.54 -0.2
968,396 + B158DRAFT_0940 0.54 -0.6
968,398 + B158DRAFT_0940 0.54 +0.0
968,404 - B158DRAFT_0940 0.54 -0.1
968,404 - B158DRAFT_0940 0.54 -0.7
968,404 - B158DRAFT_0940 0.54 -0.4
968,404 - B158DRAFT_0940 0.54 +0.1
968,404 - B158DRAFT_0940 0.54 -0.1
968,404 - B158DRAFT_0940 0.54 +0.1
968,404 - B158DRAFT_0940 0.54 -0.1
968,404 - B158DRAFT_0940 0.54 +0.1
968,404 - B158DRAFT_0940 0.54 +0.0
968,404 - B158DRAFT_0940 0.54 -0.4
968,404 - B158DRAFT_0940 0.54 -0.5
968,404 - B158DRAFT_0940 0.54 -0.0
968,459 + B158DRAFT_0940 0.59 +0.1
968,612 - B158DRAFT_0940 0.73 +0.0
968,623 + B158DRAFT_0940 0.74 -0.2
968,631 - B158DRAFT_0940 0.75 -0.2
968,631 - B158DRAFT_0940 0.75 +0.2
968,631 - B158DRAFT_0940 0.75 +0.0
968,652 - B158DRAFT_0940 0.76 -0.1
968,765 + B158DRAFT_0940 0.86 +0.5
968,770 + B158DRAFT_0940 0.87 -0.1
968,773 - B158DRAFT_0940 0.87 +0.3
968,831 - -0.0
968,884 + +0.0
968,923 + -0.2
969,089 + B158DRAFT_0941 0.20 -0.3
969,089 + B158DRAFT_0941 0.20 -0.2
969,089 + B158DRAFT_0941 0.20 -0.1
969,089 + B158DRAFT_0941 0.20 -0.4
969,097 - B158DRAFT_0941 0.21 -0.1
969,097 - B158DRAFT_0941 0.21 -0.2
969,097 - B158DRAFT_0941 0.21 -0.3
969,119 + B158DRAFT_0941 0.23 -0.3
969,152 - B158DRAFT_0941 0.27 -0.1
969,221 + B158DRAFT_0941 0.35 +0.1
969,371 - B158DRAFT_0941 0.53 +0.1
969,507 - B158DRAFT_0941 0.70 -0.4
969,507 - B158DRAFT_0941 0.70 -0.4
969,522 + B158DRAFT_0941 0.71 -0.2
969,530 - B158DRAFT_0941 0.72 -0.2
969,607 - B158DRAFT_0941 0.81 +0.8
969,614 + B158DRAFT_0941 0.82 -1.3
969,614 + B158DRAFT_0941 0.82 -0.4
969,614 + B158DRAFT_0941 0.82 +0.1
969,622 - B158DRAFT_0941 0.83 -0.2
969,622 - B158DRAFT_0941 0.83 +0.4
969,690 + -1.4
969,745 - +0.0
969,796 + +0.3
969,814 - +0.2
969,877 - -0.3
969,898 + +0.4
969,921 - -0.2
969,938 - -0.0
969,938 - -0.3
969,980 + +0.4
969,988 - +0.0
969,996 + +0.2
970,000 + +0.1
970,006 - -0.8
970,026 - -0.5
970,042 + +0.3
970,080 + -0.3
970,083 - -0.4
970,109 + B158DRAFT_0942 0.11 -0.1
970,109 + B158DRAFT_0942 0.11 -0.1
970,114 + B158DRAFT_0942 0.11 -0.1
970,117 - B158DRAFT_0942 0.11 -0.0
970,119 + B158DRAFT_0942 0.11 -0.1
970,122 - B158DRAFT_0942 0.12 +0.0
970,127 - B158DRAFT_0942 0.12 -0.0
970,237 + B158DRAFT_0942 0.17 -0.2
970,237 + B158DRAFT_0942 0.17 +0.1
970,237 + B158DRAFT_0942 0.17 -0.7
970,245 - B158DRAFT_0942 0.17 -0.3
970,245 - B158DRAFT_0942 0.17 +0.3
970,265 - B158DRAFT_0942 0.18 -0.0
970,269 + B158DRAFT_0942 0.18 +0.2
970,277 - B158DRAFT_0942 0.18 -0.1
970,279 - B158DRAFT_0942 0.18 -0.0
970,296 - B158DRAFT_0942 0.19 +0.0
970,377 - B158DRAFT_0942 0.23 +0.1
970,393 + B158DRAFT_0942 0.23 +0.2
970,393 + B158DRAFT_0942 0.23 +0.3
970,401 - B158DRAFT_0942 0.24 -0.2
970,434 + B158DRAFT_0942 0.25 -2.3
970,459 - B158DRAFT_0942 0.26 +0.2
970,546 - B158DRAFT_0942 0.30 -1.3
970,558 - B158DRAFT_0942 0.31 -0.7
970,614 + B158DRAFT_0942 0.33 +0.3
970,614 + B158DRAFT_0942 0.33 -0.0
970,617 - B158DRAFT_0942 0.33 +0.3
970,622 - B158DRAFT_0942 0.33 -0.1
970,622 - B158DRAFT_0942 0.33 -0.4
970,622 - B158DRAFT_0942 0.33 +0.0
970,622 - B158DRAFT_0942 0.33 -0.2
970,622 - B158DRAFT_0942 0.33 +0.1
970,624 + B158DRAFT_0942 0.34 -0.1
970,659 - B158DRAFT_0942 0.35 +0.0
970,669 + B158DRAFT_0942 0.36 -0.2
970,669 + B158DRAFT_0942 0.36 -0.1
970,676 + B158DRAFT_0942 0.36 +0.0
970,684 - B158DRAFT_0942 0.36 +0.0
970,689 - B158DRAFT_0942 0.36 -0.2
970,728 - B158DRAFT_0942 0.38 -0.0
970,741 + B158DRAFT_0942 0.39 +0.4
970,749 - B158DRAFT_0942 0.39 -0.0
970,754 - B158DRAFT_0942 0.39 +0.7
970,754 - B158DRAFT_0942 0.39 -0.2
970,754 - B158DRAFT_0942 0.39 -0.3

Or see this region's nucleotide sequence