Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0676

Experiment: m.b. syringaldehyde 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0675 and B158DRAFT_0676 are separated by 0 nucleotidesB158DRAFT_0676 and B158DRAFT_0677 are separated by 124 nucleotidesB158DRAFT_0677 and B158DRAFT_0678 are separated by 29 nucleotides B158DRAFT_0675: B158DRAFT_0675 - ADP-heptose:LPS heptosyltransferase, at 677,270 to 678,298 _0675 B158DRAFT_0676: B158DRAFT_0676 - Lauroyl/myristoyl acyltransferase, at 678,299 to 679,789 _0676 B158DRAFT_0677: B158DRAFT_0677 - Uncharacterized small membrane protein, at 679,914 to 680,294 _0677 B158DRAFT_0678: B158DRAFT_0678 - TIGR02444 family protein, at 680,324 to 680,830 _0678 Position (kb) 678 679 680Strain fitness (log2 ratio) -2 -1 0 1at 677.352 kb on + strandat 677.352 kb on + strandat 677.398 kb on - strand, within B158DRAFT_0675at 677.407 kb on + strand, within B158DRAFT_0675at 677.415 kb on - strand, within B158DRAFT_0675at 677.522 kb on + strand, within B158DRAFT_0675at 677.522 kb on + strand, within B158DRAFT_0675at 677.530 kb on - strand, within B158DRAFT_0675at 677.662 kb on - strand, within B158DRAFT_0675at 677.705 kb on + strand, within B158DRAFT_0675at 677.705 kb on + strand, within B158DRAFT_0675at 677.715 kb on + strand, within B158DRAFT_0675at 677.725 kb on - strand, within B158DRAFT_0675at 677.746 kb on - strand, within B158DRAFT_0675at 677.780 kb on + strand, within B158DRAFT_0675at 677.787 kb on + strand, within B158DRAFT_0675at 677.795 kb on - strand, within B158DRAFT_0675at 677.795 kb on - strand, within B158DRAFT_0675at 677.827 kb on + strand, within B158DRAFT_0675at 677.855 kb on - strand, within B158DRAFT_0675at 678.005 kb on + strand, within B158DRAFT_0675at 678.065 kb on + strand, within B158DRAFT_0675at 678.073 kb on - strand, within B158DRAFT_0675at 678.096 kb on + strand, within B158DRAFT_0675at 678.096 kb on + strand, within B158DRAFT_0675at 678.096 kb on + strand, within B158DRAFT_0675at 678.126 kb on + strand, within B158DRAFT_0675at 678.144 kb on - strand, within B158DRAFT_0675at 678.144 kb on - strand, within B158DRAFT_0675at 678.167 kb on + strand, within B158DRAFT_0675at 678.167 kb on - strand, within B158DRAFT_0675at 678.175 kb on - strand, within B158DRAFT_0675at 678.218 kb on + strandat 678.221 kb on - strandat 678.249 kb on + strandat 678.249 kb on + strandat 678.257 kb on - strandat 678.257 kb on - strandat 678.309 kb on + strandat 678.311 kb on - strandat 678.317 kb on - strandat 678.324 kb on + strandat 678.522 kb on - strand, within B158DRAFT_0676at 678.532 kb on - strand, within B158DRAFT_0676at 678.532 kb on - strand, within B158DRAFT_0676at 678.553 kb on + strand, within B158DRAFT_0676at 678.597 kb on - strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.652 kb on + strand, within B158DRAFT_0676at 678.661 kb on + strand, within B158DRAFT_0676at 678.692 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.798 kb on + strand, within B158DRAFT_0676at 678.830 kb on + strand, within B158DRAFT_0676at 678.838 kb on - strand, within B158DRAFT_0676at 678.844 kb on - strand, within B158DRAFT_0676at 678.868 kb on + strand, within B158DRAFT_0676at 678.876 kb on - strand, within B158DRAFT_0676at 678.944 kb on - strand, within B158DRAFT_0676at 678.957 kb on + strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 679.031 kb on - strand, within B158DRAFT_0676at 679.052 kb on + strand, within B158DRAFT_0676at 679.060 kb on - strand, within B158DRAFT_0676at 679.078 kb on - strand, within B158DRAFT_0676at 679.108 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.124 kb on - strand, within B158DRAFT_0676at 679.138 kb on + strand, within B158DRAFT_0676at 679.156 kb on - strand, within B158DRAFT_0676at 679.226 kb on - strand, within B158DRAFT_0676at 679.291 kb on + strand, within B158DRAFT_0676at 679.315 kb on + strand, within B158DRAFT_0676at 679.320 kb on + strand, within B158DRAFT_0676at 679.320 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.407 kb on - strand, within B158DRAFT_0676at 679.407 kb on - strand, within B158DRAFT_0676at 679.412 kb on - strand, within B158DRAFT_0676at 679.468 kb on + strand, within B158DRAFT_0676at 679.512 kb on + strand, within B158DRAFT_0676at 679.512 kb on + strand, within B158DRAFT_0676at 679.521 kb on - strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.545 kb on + strand, within B158DRAFT_0676at 679.581 kb on + strand, within B158DRAFT_0676at 679.588 kb on + strand, within B158DRAFT_0676at 679.588 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.596 kb on - strand, within B158DRAFT_0676at 679.601 kb on - strand, within B158DRAFT_0676at 679.636 kb on + strand, within B158DRAFT_0676at 679.657 kb on - strandat 679.673 kb on + strandat 679.699 kb on - strandat 679.709 kb on + strandat 679.714 kb on + strandat 679.883 kb on + strandat 679.884 kb on - strandat 679.891 kb on - strandat 679.893 kb on + strandat 679.946 kb on + strandat 679.960 kb on + strand, within B158DRAFT_0677at 679.965 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.998 kb on - strand, within B158DRAFT_0677at 680.011 kb on + strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.163 kb on - strand, within B158DRAFT_0677at 680.255 kb on - strand, within B158DRAFT_0677at 680.255 kb on - strand, within B158DRAFT_0677at 680.262 kb on + strandat 680.262 kb on + strandat 680.262 kb on + strandat 680.270 kb on - strandat 680.270 kb on - strandat 680.283 kb on - strandat 680.283 kb on - strandat 680.323 kb on - strandat 680.377 kb on - strand, within B158DRAFT_0678at 680.409 kb on - strand, within B158DRAFT_0678at 680.409 kb on - strand, within B158DRAFT_0678at 680.423 kb on + strand, within B158DRAFT_0678at 680.423 kb on + strand, within B158DRAFT_0678at 680.441 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.488 kb on - strand, within B158DRAFT_0678at 680.488 kb on - strand, within B158DRAFT_0678at 680.531 kb on + strand, within B158DRAFT_0678at 680.539 kb on - strand, within B158DRAFT_0678at 680.539 kb on - strand, within B158DRAFT_0678at 680.566 kb on - strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.770 kb on + strand, within B158DRAFT_0678at 680.771 kb on + strand, within B158DRAFT_0678at 680.777 kb on + strand, within B158DRAFT_0678

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 1 mM
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677,352 + -0.3
677,352 + -0.8
677,398 - B158DRAFT_0675 0.12 -0.2
677,407 + B158DRAFT_0675 0.13 +0.2
677,415 - B158DRAFT_0675 0.14 -0.4
677,522 + B158DRAFT_0675 0.24 -0.0
677,522 + B158DRAFT_0675 0.24 -0.1
677,530 - B158DRAFT_0675 0.25 +0.3
677,662 - B158DRAFT_0675 0.38 -0.4
677,705 + B158DRAFT_0675 0.42 -0.0
677,705 + B158DRAFT_0675 0.42 +0.0
677,715 + B158DRAFT_0675 0.43 -0.5
677,725 - B158DRAFT_0675 0.44 -0.1
677,746 - B158DRAFT_0675 0.46 +0.3
677,780 + B158DRAFT_0675 0.50 +0.1
677,787 + B158DRAFT_0675 0.50 -0.3
677,795 - B158DRAFT_0675 0.51 -0.3
677,795 - B158DRAFT_0675 0.51 -0.1
677,827 + B158DRAFT_0675 0.54 -0.2
677,855 - B158DRAFT_0675 0.57 +0.2
678,005 + B158DRAFT_0675 0.71 -0.3
678,065 + B158DRAFT_0675 0.77 +0.1
678,073 - B158DRAFT_0675 0.78 -0.0
678,096 + B158DRAFT_0675 0.80 -0.2
678,096 + B158DRAFT_0675 0.80 -0.1
678,096 + B158DRAFT_0675 0.80 +0.1
678,126 + B158DRAFT_0675 0.83 +0.0
678,144 - B158DRAFT_0675 0.85 -0.1
678,144 - B158DRAFT_0675 0.85 -0.3
678,167 + B158DRAFT_0675 0.87 +0.5
678,167 - B158DRAFT_0675 0.87 +0.3
678,175 - B158DRAFT_0675 0.88 -0.0
678,218 + -0.3
678,221 - -0.3
678,249 + -0.0
678,249 + -0.3
678,257 - -0.2
678,257 - -0.3
678,309 + +0.2
678,311 - +0.5
678,317 - -0.1
678,324 + +0.2
678,522 - B158DRAFT_0676 0.15 -1.1
678,532 - B158DRAFT_0676 0.16 -0.1
678,532 - B158DRAFT_0676 0.16 -1.7
678,553 + B158DRAFT_0676 0.17 -0.7
678,597 - B158DRAFT_0676 0.20 +0.4
678,610 + B158DRAFT_0676 0.21 +0.1
678,610 + B158DRAFT_0676 0.21 -0.8
678,610 + B158DRAFT_0676 0.21 -0.4
678,610 + B158DRAFT_0676 0.21 -1.0
678,610 + B158DRAFT_0676 0.21 -0.1
678,610 + B158DRAFT_0676 0.21 +0.7
678,610 + B158DRAFT_0676 0.21 -1.4
678,610 + B158DRAFT_0676 0.21 -0.4
678,610 + B158DRAFT_0676 0.21 -0.5
678,610 + B158DRAFT_0676 0.21 -0.5
678,618 - B158DRAFT_0676 0.21 -0.6
678,618 - B158DRAFT_0676 0.21 -0.2
678,618 - B158DRAFT_0676 0.21 -0.5
678,618 - B158DRAFT_0676 0.21 -0.1
678,618 - B158DRAFT_0676 0.21 +1.0
678,618 - B158DRAFT_0676 0.21 -0.1
678,618 - B158DRAFT_0676 0.21 -0.4
678,652 + B158DRAFT_0676 0.24 -0.7
678,661 + B158DRAFT_0676 0.24 -0.6
678,692 + B158DRAFT_0676 0.26 -0.3
678,754 + B158DRAFT_0676 0.31 -0.2
678,754 + B158DRAFT_0676 0.31 +0.2
678,754 + B158DRAFT_0676 0.31 -0.8
678,754 + B158DRAFT_0676 0.31 -0.1
678,754 + B158DRAFT_0676 0.31 -0.6
678,762 - B158DRAFT_0676 0.31 +0.1
678,762 - B158DRAFT_0676 0.31 -0.7
678,762 - B158DRAFT_0676 0.31 -0.4
678,762 - B158DRAFT_0676 0.31 -0.1
678,798 + B158DRAFT_0676 0.33 -0.3
678,830 + B158DRAFT_0676 0.36 -0.5
678,838 - B158DRAFT_0676 0.36 -0.2
678,844 - B158DRAFT_0676 0.37 -0.8
678,868 + B158DRAFT_0676 0.38 -0.1
678,876 - B158DRAFT_0676 0.39 +0.1
678,944 - B158DRAFT_0676 0.43 -0.2
678,957 + B158DRAFT_0676 0.44 -0.7
678,965 - B158DRAFT_0676 0.45 +0.1
678,965 - B158DRAFT_0676 0.45 -1.2
678,965 - B158DRAFT_0676 0.45 -0.4
678,967 + B158DRAFT_0676 0.45 -0.6
678,967 + B158DRAFT_0676 0.45 -0.8
678,967 + B158DRAFT_0676 0.45 -0.9
678,967 + B158DRAFT_0676 0.45 -0.6
678,975 - B158DRAFT_0676 0.45 -0.8
678,975 - B158DRAFT_0676 0.45 -1.7
679,031 - B158DRAFT_0676 0.49 -0.7
679,052 + B158DRAFT_0676 0.51 -0.8
679,060 - B158DRAFT_0676 0.51 -0.7
679,078 - B158DRAFT_0676 0.52 -0.6
679,108 + B158DRAFT_0676 0.54 -0.4
679,116 + B158DRAFT_0676 0.55 -0.4
679,116 + B158DRAFT_0676 0.55 -1.8
679,116 + B158DRAFT_0676 0.55 -0.9
679,116 + B158DRAFT_0676 0.55 -1.4
679,124 - B158DRAFT_0676 0.55 -0.7
679,138 + B158DRAFT_0676 0.56 -0.2
679,156 - B158DRAFT_0676 0.57 -1.1
679,226 - B158DRAFT_0676 0.62 -0.2
679,291 + B158DRAFT_0676 0.67 -1.0
679,315 + B158DRAFT_0676 0.68 +0.1
679,320 + B158DRAFT_0676 0.68 -1.1
679,320 + B158DRAFT_0676 0.68 -0.4
679,366 + B158DRAFT_0676 0.72 -2.3
679,366 + B158DRAFT_0676 0.72 -2.4
679,366 + B158DRAFT_0676 0.72 -0.2
679,407 - B158DRAFT_0676 0.74 -1.0
679,407 - B158DRAFT_0676 0.74 -1.0
679,412 - B158DRAFT_0676 0.75 -1.1
679,468 + B158DRAFT_0676 0.78 -0.8
679,512 + B158DRAFT_0676 0.81 -1.0
679,512 + B158DRAFT_0676 0.81 -0.5
679,521 - B158DRAFT_0676 0.82 -1.9
679,523 + B158DRAFT_0676 0.82 -1.3
679,523 + B158DRAFT_0676 0.82 -0.8
679,523 + B158DRAFT_0676 0.82 +0.8
679,523 + B158DRAFT_0676 0.82 -0.8
679,531 - B158DRAFT_0676 0.83 -1.3
679,531 - B158DRAFT_0676 0.83 -0.5
679,531 - B158DRAFT_0676 0.83 -1.3
679,531 - B158DRAFT_0676 0.83 -0.5
679,531 - B158DRAFT_0676 0.83 -0.6
679,531 - B158DRAFT_0676 0.83 -0.2
679,531 - B158DRAFT_0676 0.83 -1.2
679,531 - B158DRAFT_0676 0.83 -1.5
679,545 + B158DRAFT_0676 0.84 -0.9
679,581 + B158DRAFT_0676 0.86 -1.1
679,588 + B158DRAFT_0676 0.86 -1.1
679,588 + B158DRAFT_0676 0.86 -0.9
679,593 + B158DRAFT_0676 0.87 -1.2
679,593 + B158DRAFT_0676 0.87 -1.1
679,593 + B158DRAFT_0676 0.87 -0.1
679,596 - B158DRAFT_0676 0.87 -1.2
679,601 - B158DRAFT_0676 0.87 -1.0
679,636 + B158DRAFT_0676 0.90 -1.3
679,657 - -0.8
679,673 + -1.9
679,699 - +0.6
679,709 + -0.7
679,714 + -1.1
679,883 + -0.1
679,884 - -0.5
679,891 - +0.3
679,893 + -0.4
679,946 + -0.1
679,960 + B158DRAFT_0677 0.12 +0.3
679,965 + B158DRAFT_0677 0.13 +0.4
679,990 + B158DRAFT_0677 0.20 +0.1
679,990 + B158DRAFT_0677 0.20 -0.1
679,990 + B158DRAFT_0677 0.20 -0.3
679,990 + B158DRAFT_0677 0.20 +0.2
679,998 - B158DRAFT_0677 0.22 -0.3
680,011 + B158DRAFT_0677 0.25 -0.1
680,110 - B158DRAFT_0677 0.51 +0.0
680,110 - B158DRAFT_0677 0.51 -0.1
680,110 - B158DRAFT_0677 0.51 -0.1
680,163 - B158DRAFT_0677 0.65 +0.0
680,255 - B158DRAFT_0677 0.90 +0.4
680,255 - B158DRAFT_0677 0.90 +0.3
680,262 + -0.2
680,262 + -0.6
680,262 + -0.2
680,270 - -0.4
680,270 - -0.1
680,283 - +0.1
680,283 - -0.2
680,323 - -0.4
680,377 - B158DRAFT_0678 0.10 -0.1
680,409 - B158DRAFT_0678 0.17 +0.2
680,409 - B158DRAFT_0678 0.17 -0.1
680,423 + B158DRAFT_0678 0.20 +0.1
680,423 + B158DRAFT_0678 0.20 +0.0
680,441 - B158DRAFT_0678 0.23 -0.2
680,480 - B158DRAFT_0678 0.31 -0.2
680,480 - B158DRAFT_0678 0.31 -0.2
680,480 - B158DRAFT_0678 0.31 -0.1
680,488 - B158DRAFT_0678 0.32 +0.4
680,488 - B158DRAFT_0678 0.32 +0.5
680,531 + B158DRAFT_0678 0.41 -0.0
680,539 - B158DRAFT_0678 0.42 -0.2
680,539 - B158DRAFT_0678 0.42 -0.2
680,566 - B158DRAFT_0678 0.48 -0.3
680,666 + B158DRAFT_0678 0.67 -0.0
680,666 + B158DRAFT_0678 0.67 +0.5
680,666 + B158DRAFT_0678 0.67 +0.0
680,674 - B158DRAFT_0678 0.69 -0.3
680,674 - B158DRAFT_0678 0.69 -0.8
680,674 - B158DRAFT_0678 0.69 +0.0
680,674 - B158DRAFT_0678 0.69 +0.5
680,770 + B158DRAFT_0678 0.88 +0.8
680,771 + B158DRAFT_0678 0.88 +1.0
680,777 + B158DRAFT_0678 0.89 -0.2

Or see this region's nucleotide sequence