Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0532

Experiment: m.b. syringaldehyde 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0530 and B158DRAFT_0531 are separated by 26 nucleotidesB158DRAFT_0531 and B158DRAFT_0532 are separated by 197 nucleotidesB158DRAFT_0532 and B158DRAFT_0533 are separated by 42 nucleotides B158DRAFT_0530: B158DRAFT_0530 - cell division protein ZapA, at 537,489 to 537,815 _0530 B158DRAFT_0531: B158DRAFT_0531 - hypothetical protein, at 537,842 to 538,039 _0531 B158DRAFT_0532: B158DRAFT_0532 - Uncharacterized protein conserved in bacteria, at 538,237 to 538,788 _0532 B158DRAFT_0533: B158DRAFT_0533 - Xaa-Pro aminopeptidase, at 538,831 to 540,150 _0533 Position (kb) 538 539Strain fitness (log2 ratio) -3 -2 -1 0 1at 537.243 kb on + strandat 537.243 kb on + strandat 537.269 kb on - strandat 537.414 kb on - strandat 537.416 kb on + strandat 537.416 kb on + strandat 537.453 kb on - strandat 537.554 kb on + strand, within B158DRAFT_0530at 537.554 kb on + strand, within B158DRAFT_0530at 537.554 kb on + strand, within B158DRAFT_0530at 537.554 kb on + strand, within B158DRAFT_0530at 537.562 kb on - strand, within B158DRAFT_0530at 537.601 kb on + strand, within B158DRAFT_0530at 537.627 kb on + strand, within B158DRAFT_0530at 537.635 kb on - strand, within B158DRAFT_0530at 537.635 kb on - strand, within B158DRAFT_0530at 537.666 kb on - strand, within B158DRAFT_0530at 537.794 kb on - strandat 538.124 kb on - strandat 538.159 kb on + strandat 538.160 kb on + strandat 538.175 kb on - strandat 538.191 kb on + strandat 538.255 kb on + strandat 538.305 kb on - strand, within B158DRAFT_0532at 538.321 kb on - strand, within B158DRAFT_0532at 538.396 kb on - strand, within B158DRAFT_0532at 538.439 kb on + strand, within B158DRAFT_0532at 538.469 kb on - strand, within B158DRAFT_0532at 538.493 kb on - strand, within B158DRAFT_0532at 538.516 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.561 kb on + strand, within B158DRAFT_0532at 538.620 kb on - strand, within B158DRAFT_0532at 538.708 kb on - strand, within B158DRAFT_0532at 538.754 kb on + strandat 538.788 kb on + strandat 538.797 kb on - strandat 538.797 kb on - strandat 538.797 kb on - strandat 538.799 kb on + strandat 538.817 kb on + strandat 538.825 kb on - strandat 538.882 kb on + strandat 538.931 kb on + strandat 538.931 kb on + strandat 538.934 kb on - strandat 538.939 kb on - strandat 538.944 kb on - strandat 539.003 kb on - strand, within B158DRAFT_0533at 539.003 kb on - strand, within B158DRAFT_0533at 539.024 kb on + strand, within B158DRAFT_0533at 539.106 kb on + strand, within B158DRAFT_0533at 539.111 kb on - strand, within B158DRAFT_0533at 539.114 kb on - strand, within B158DRAFT_0533at 539.124 kb on + strand, within B158DRAFT_0533at 539.124 kb on + strand, within B158DRAFT_0533at 539.124 kb on + strand, within B158DRAFT_0533at 539.132 kb on - strand, within B158DRAFT_0533at 539.132 kb on - strand, within B158DRAFT_0533at 539.276 kb on - strand, within B158DRAFT_0533at 539.276 kb on - strand, within B158DRAFT_0533at 539.286 kb on - strand, within B158DRAFT_0533at 539.331 kb on - strand, within B158DRAFT_0533at 539.400 kb on + strand, within B158DRAFT_0533at 539.403 kb on - strand, within B158DRAFT_0533at 539.415 kb on + strand, within B158DRAFT_0533at 539.424 kb on - strand, within B158DRAFT_0533at 539.451 kb on + strand, within B158DRAFT_0533at 539.493 kb on + strand, within B158DRAFT_0533at 539.540 kb on + strand, within B158DRAFT_0533at 539.564 kb on + strand, within B158DRAFT_0533at 539.578 kb on + strand, within B158DRAFT_0533at 539.592 kb on - strand, within B158DRAFT_0533at 539.669 kb on + strand, within B158DRAFT_0533at 539.674 kb on + strand, within B158DRAFT_0533at 539.680 kb on + strand, within B158DRAFT_0533at 539.688 kb on + strand, within B158DRAFT_0533at 539.729 kb on + strand, within B158DRAFT_0533at 539.753 kb on - strand, within B158DRAFT_0533at 539.753 kb on - strand, within B158DRAFT_0533at 539.778 kb on + strand, within B158DRAFT_0533

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. syringaldehyde 1 mM
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537,243 + +0.5
537,243 + +0.0
537,269 - +0.3
537,414 - +0.2
537,416 + -0.1
537,416 + -0.1
537,453 - +0.4
537,554 + B158DRAFT_0530 0.20 -1.0
537,554 + B158DRAFT_0530 0.20 +0.2
537,554 + B158DRAFT_0530 0.20 +0.1
537,554 + B158DRAFT_0530 0.20 -0.4
537,562 - B158DRAFT_0530 0.22 -0.0
537,601 + B158DRAFT_0530 0.34 -0.4
537,627 + B158DRAFT_0530 0.42 -0.3
537,635 - B158DRAFT_0530 0.45 -0.2
537,635 - B158DRAFT_0530 0.45 -0.5
537,666 - B158DRAFT_0530 0.54 +0.1
537,794 - -0.3
538,124 - +0.1
538,159 + -0.0
538,160 + +0.0
538,175 - -0.7
538,191 + +0.1
538,255 + -0.3
538,305 - B158DRAFT_0532 0.12 -0.9
538,321 - B158DRAFT_0532 0.15 -1.0
538,396 - B158DRAFT_0532 0.29 -1.0
538,439 + B158DRAFT_0532 0.37 -0.1
538,469 - B158DRAFT_0532 0.42 -0.7
538,493 - B158DRAFT_0532 0.46 -0.2
538,516 - B158DRAFT_0532 0.51 -1.2
538,529 - B158DRAFT_0532 0.53 -0.7
538,529 - B158DRAFT_0532 0.53 +0.0
538,529 - B158DRAFT_0532 0.53 -0.6
538,561 + B158DRAFT_0532 0.59 -0.3
538,620 - B158DRAFT_0532 0.69 -1.0
538,708 - B158DRAFT_0532 0.85 -1.0
538,754 + -0.3
538,788 + -0.0
538,797 - -0.7
538,797 - -0.9
538,797 - -1.3
538,799 + -0.5
538,817 + -0.1
538,825 - -0.9
538,882 + -0.7
538,931 + +0.5
538,931 + -0.2
538,934 - -1.0
538,939 - -0.9
538,944 - -0.6
539,003 - B158DRAFT_0533 0.13 -1.0
539,003 - B158DRAFT_0533 0.13 -0.8
539,024 + B158DRAFT_0533 0.15 +0.0
539,106 + B158DRAFT_0533 0.21 -0.1
539,111 - B158DRAFT_0533 0.21 -0.5
539,114 - B158DRAFT_0533 0.21 -0.9
539,124 + B158DRAFT_0533 0.22 +0.1
539,124 + B158DRAFT_0533 0.22 -0.4
539,124 + B158DRAFT_0533 0.22 -0.1
539,132 - B158DRAFT_0533 0.23 -1.2
539,132 - B158DRAFT_0533 0.23 -0.8
539,276 - B158DRAFT_0533 0.34 -2.1
539,276 - B158DRAFT_0533 0.34 -2.8
539,286 - B158DRAFT_0533 0.34 -1.2
539,331 - B158DRAFT_0533 0.38 -2.1
539,400 + B158DRAFT_0533 0.43 -0.3
539,403 - B158DRAFT_0533 0.43 -2.3
539,415 + B158DRAFT_0533 0.44 -0.1
539,424 - B158DRAFT_0533 0.45 -0.5
539,451 + B158DRAFT_0533 0.47 -0.6
539,493 + B158DRAFT_0533 0.50 +0.1
539,540 + B158DRAFT_0533 0.54 +0.3
539,564 + B158DRAFT_0533 0.56 -0.2
539,578 + B158DRAFT_0533 0.57 -0.5
539,592 - B158DRAFT_0533 0.58 -1.3
539,669 + B158DRAFT_0533 0.63 -0.1
539,674 + B158DRAFT_0533 0.64 +0.0
539,680 + B158DRAFT_0533 0.64 -0.1
539,688 + B158DRAFT_0533 0.65 -0.2
539,729 + B158DRAFT_0533 0.68 -0.3
539,753 - B158DRAFT_0533 0.70 -3.0
539,753 - B158DRAFT_0533 0.70 -2.3
539,778 + B158DRAFT_0533 0.72 +0.2

Or see this region's nucleotide sequence