Strain Fitness in Bosea sp. OAE506 around ABIE41_RS23880

Experiment: NP

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NP
4,928,823	+		ABIE41_RS23875	0.58	+0.6
4,928,824	-		ABIE41_RS23875	0.58	-0.2
4,928,856	+		ABIE41_RS23875	0.60	-0.7
4,928,856	+		ABIE41_RS23875	0.60	-0.0
4,928,856	+		ABIE41_RS23875	0.60	+3.7
4,928,856	+		ABIE41_RS23875	0.60	-1.9
4,928,857	-		ABIE41_RS23875	0.60	+0.1
4,928,857	-		ABIE41_RS23875	0.60	-0.2
4,928,857	-		ABIE41_RS23875	0.60	-0.5
4,928,857	-		ABIE41_RS23875	0.60	-0.2
4,929,021	+		ABIE41_RS23875	0.72	-3.2
4,929,021	+		ABIE41_RS23875	0.72	-0.2
4,929,021	+		ABIE41_RS23875	0.72	-1.2
4,929,021	+		ABIE41_RS23875	0.72	+0.1
4,929,021	+		ABIE41_RS23875	0.72	+2.1
4,929,021	+		ABIE41_RS23875	0.72	-0.3
4,929,022	-		ABIE41_RS23875	0.72	-0.2
4,929,022	-		ABIE41_RS23875	0.72	+1.4
4,929,022	-		ABIE41_RS23875	0.72	-1.6
4,929,022	-		ABIE41_RS23875	0.72	-0.8
4,929,022	-		ABIE41_RS23875	0.72	-0.0
4,929,096	+		ABIE41_RS23875	0.77	-0.1
4,929,096	+		ABIE41_RS23875	0.77	-0.1
4,929,097	-		ABIE41_RS23875	0.77	-1.7
4,929,108	+		ABIE41_RS23875	0.78	-0.2
4,929,109	-		ABIE41_RS23875	0.78	-0.6
4,929,109	-		ABIE41_RS23875	0.78	+0.7
4,929,109	-		ABIE41_RS23875	0.78	-0.1
4,929,342	+				+0.1
4,929,342	+				+0.1
4,929,342	+				-0.2
4,929,342	+				+0.7
4,929,342	+				-0.4
4,929,342	+				+2.1
4,929,342	+				-0.1
4,929,342	+				+0.4
4,929,343	-				+1.2
4,929,343	-				-0.3
4,929,345	-				+0.1
4,929,345	-				+0.5
4,929,363	-				+1.6
4,929,372	+				+0.1
4,929,373	-				+0.1
4,929,478	+				-0.4
4,929,479	-				-0.2
4,929,479	-				+0.5
4,929,479	-				-0.3
4,929,718	+		ABIE41_RS23880	0.14	-0.6
4,929,719	-		ABIE41_RS23880	0.14	-0.3
4,929,719	-		ABIE41_RS23880	0.14	-0.7
4,929,719	-		ABIE41_RS23880	0.14	+0.1
4,929,719	-		ABIE41_RS23880	0.14	+0.0
4,929,799	+		ABIE41_RS23880	0.20	+1.5
4,929,799	+		ABIE41_RS23880	0.20	+0.4
4,929,799	+		ABIE41_RS23880	0.20	+0.6
4,929,799	+		ABIE41_RS23880	0.20	-0.2
4,929,799	+		ABIE41_RS23880	0.20	+0.1
4,929,799	+		ABIE41_RS23880	0.20	+1.1
4,929,820	+		ABIE41_RS23880	0.22	+0.1
4,929,820	+		ABIE41_RS23880	0.22	-0.5
4,929,821	-		ABIE41_RS23880	0.22	-0.2
4,929,821	-		ABIE41_RS23880	0.22	+0.2
4,929,821	-		ABIE41_RS23880	0.22	-1.0
4,929,821	-		ABIE41_RS23880	0.22	+0.3
4,929,821	-		ABIE41_RS23880	0.22	-0.1
4,929,821	-		ABIE41_RS23880	0.22	+1.1
4,929,821	-		ABIE41_RS23880	0.22	+0.7
4,929,829	+		ABIE41_RS23880	0.23	-0.5
4,929,829	+		ABIE41_RS23880	0.23	+0.4
4,929,919	+		ABIE41_RS23880	0.30	+0.1
4,929,919	+		ABIE41_RS23880	0.30	-0.0
4,929,919	+		ABIE41_RS23880	0.30	-1.2
4,929,919	+		ABIE41_RS23880	0.30	+0.3
4,929,920	-		ABIE41_RS23880	0.30	+2.0
4,929,920	-		ABIE41_RS23880	0.30	-1.8
4,929,952	+		ABIE41_RS23880	0.33	+0.3
4,929,952	+		ABIE41_RS23880	0.33	-0.3
4,929,953	-		ABIE41_RS23880	0.33	+3.4
4,929,953	-		ABIE41_RS23880	0.33	-0.7
4,930,345	+		ABIE41_RS23880	0.65	-0.4
4,930,350	+		ABIE41_RS23880	0.65	+0.9
4,930,350	+		ABIE41_RS23880	0.65	-0.7
4,930,350	+		ABIE41_RS23880	0.65	+0.3
4,930,475	+		ABIE41_RS23880	0.76	+0.4
4,930,476	+		ABIE41_RS23880	0.76	-1.2
4,930,654	+				-0.3
4,930,654	+				-0.3
4,930,699	+				-0.4
4,930,699	+				+1.7
4,930,699	+				-0.3
4,930,699	+				-0.3
4,930,699	+				-0.2
4,930,699	+				-0.4
4,930,699	+				+1.1
4,930,699	+				+0.5
4,930,700	-				-0.4
4,930,700	-				-0.9
4,930,700	-				+0.1
4,930,700	-				+0.8
4,930,700	-				-1.2
4,930,700	-				+0.7
4,930,700	-				+0.0
4,930,700	-				+0.2
4,930,700	-				+0.2
4,930,700	-				+0.5
4,930,775	-				+0.1
4,930,775	-				+0.6
4,930,775	-				-0.0
4,930,775	-				+0.9
4,931,076	-		ABIE41_RS23885	0.16	+2.3
4,931,213	+		ABIE41_RS23885	0.28	-0.2
4,931,214	-		ABIE41_RS23885	0.28	+0.0
4,931,261	+		ABIE41_RS23885	0.32	-1.5
4,931,261	+		ABIE41_RS23885	0.32	-0.9
4,931,261	+		ABIE41_RS23885	0.32	-0.4
4,931,262	-		ABIE41_RS23885	0.32	-0.2
4,931,262	-		ABIE41_RS23885	0.32	+0.8
4,931,262	-		ABIE41_RS23885	0.32	+0.7
4,931,393	+		ABIE41_RS23885	0.43	+0.3
4,931,394	-		ABIE41_RS23885	0.43	-2.1
4,931,394	-		ABIE41_RS23885	0.43	+1.1
4,931,411	+		ABIE41_RS23885	0.45	+0.4
4,931,411	+		ABIE41_RS23885	0.45	+0.8
4,931,411	+		ABIE41_RS23885	0.45	+0.1
4,931,411	+		ABIE41_RS23885	0.45	+0.0
4,931,411	+		ABIE41_RS23885	0.45	+0.6
4,931,412	-		ABIE41_RS23885	0.45	+0.3
4,931,412	-		ABIE41_RS23885	0.45	+0.1
4,931,412	-		ABIE41_RS23885	0.45	-0.3
4,931,543	+		ABIE41_RS23885	0.56	+0.7
4,931,543	+		ABIE41_RS23885	0.56	+1.1
4,931,543	+		ABIE41_RS23885	0.56	-0.5
4,931,543	+		ABIE41_RS23885	0.56	-0.1
4,931,603	+		ABIE41_RS23885	0.61	-0.2
4,931,604	-		ABIE41_RS23885	0.61	-0.1
4,931,686	-		ABIE41_RS23885	0.68	+2.1
4,931,686	-		ABIE41_RS23885	0.68	+1.4
4,931,717	+		ABIE41_RS23885	0.70	+0.1