Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4412 and Echvi_4413 are separated by 11 nucleotides Echvi_4413 and Echvi_4414 are separated by 333 nucleotides Echvi_4414 and Echvi_4415 are separated by 231 nucleotides
Echvi_4412: Echvi_4412 - hypothetical protein, at 5,275,802 to 5,277,331
_4412
Echvi_4413: Echvi_4413 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase, at 5,277,343 to 5,279,079
_4413
Echvi_4414: Echvi_4414 - hypothetical protein, at 5,279,413 to 5,279,541
_4414
Echvi_4415: Echvi_4415 - Transcription antiterminator, at 5,279,773 to 5,280,276
_4415
Position (kb)
5277
5278
5279
5280 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5276.451 kb on + strand, within Echvi_4412 at 5276.552 kb on + strand, within Echvi_4412 at 5276.770 kb on - strand, within Echvi_4412 at 5276.849 kb on - strand, within Echvi_4412 at 5276.850 kb on + strand, within Echvi_4412 at 5276.850 kb on + strand, within Echvi_4412 at 5276.882 kb on + strand, within Echvi_4412 at 5276.883 kb on - strand, within Echvi_4412 at 5276.893 kb on + strand, within Echvi_4412 at 5276.893 kb on + strand, within Echvi_4412 at 5276.894 kb on - strand, within Echvi_4412 at 5276.894 kb on - strand, within Echvi_4412 at 5276.895 kb on + strand, within Echvi_4412 at 5276.930 kb on + strand, within Echvi_4412 at 5276.943 kb on + strand, within Echvi_4412 at 5277.032 kb on + strand, within Echvi_4412 at 5277.032 kb on + strand, within Echvi_4412 at 5277.052 kb on - strand, within Echvi_4412 at 5277.058 kb on + strand, within Echvi_4412 at 5277.059 kb on - strand, within Echvi_4412 at 5277.060 kb on + strand, within Echvi_4412 at 5277.061 kb on - strand, within Echvi_4412 at 5277.087 kb on - strand, within Echvi_4412 at 5277.188 kb on + strand at 5277.233 kb on + strand at 5277.250 kb on - strand at 5277.285 kb on + strand at 5277.286 kb on - strand at 5277.333 kb on + strand at 5277.333 kb on + strand at 5277.333 kb on + strand at 5277.333 kb on + strand at 5277.333 kb on + strand at 5277.333 kb on + strand at 5277.334 kb on - strand at 5277.334 kb on - strand at 5277.334 kb on - strand at 5277.334 kb on - strand at 5277.388 kb on + strand at 5277.434 kb on + strand at 5277.434 kb on + strand at 5277.508 kb on - strand at 5277.563 kb on + strand, within Echvi_4413 at 5277.563 kb on + strand, within Echvi_4413 at 5277.564 kb on - strand, within Echvi_4413 at 5277.621 kb on + strand, within Echvi_4413 at 5277.621 kb on + strand, within Echvi_4413 at 5277.621 kb on + strand, within Echvi_4413 at 5277.621 kb on + strand, within Echvi_4413 at 5277.622 kb on - strand, within Echvi_4413 at 5277.622 kb on - strand, within Echvi_4413 at 5277.749 kb on + strand, within Echvi_4413 at 5277.759 kb on + strand, within Echvi_4413 at 5277.825 kb on + strand, within Echvi_4413 at 5277.825 kb on + strand, within Echvi_4413 at 5277.825 kb on + strand, within Echvi_4413 at 5277.845 kb on - strand, within Echvi_4413 at 5277.860 kb on + strand, within Echvi_4413 at 5277.974 kb on + strand, within Echvi_4413 at 5277.974 kb on + strand, within Echvi_4413 at 5277.974 kb on + strand, within Echvi_4413 at 5277.974 kb on + strand, within Echvi_4413 at 5277.974 kb on + strand, within Echvi_4413 at 5278.040 kb on + strand, within Echvi_4413 at 5278.122 kb on + strand, within Echvi_4413 at 5278.141 kb on - strand, within Echvi_4413 at 5278.223 kb on + strand, within Echvi_4413 at 5278.395 kb on + strand, within Echvi_4413 at 5278.396 kb on - strand, within Echvi_4413 at 5278.399 kb on + strand, within Echvi_4413 at 5278.400 kb on - strand, within Echvi_4413 at 5278.400 kb on - strand, within Echvi_4413 at 5278.444 kb on - strand, within Echvi_4413 at 5278.534 kb on + strand, within Echvi_4413 at 5278.545 kb on + strand, within Echvi_4413 at 5278.545 kb on + strand, within Echvi_4413 at 5278.546 kb on - strand, within Echvi_4413 at 5278.546 kb on - strand, within Echvi_4413 at 5278.649 kb on + strand, within Echvi_4413 at 5278.806 kb on - strand, within Echvi_4413 at 5278.832 kb on + strand, within Echvi_4413 at 5278.833 kb on - strand, within Echvi_4413 at 5278.833 kb on - strand, within Echvi_4413 at 5278.940 kb on + strand at 5278.941 kb on - strand at 5278.992 kb on + strand at 5279.047 kb on + strand at 5279.076 kb on - strand at 5279.080 kb on - strand at 5279.110 kb on + strand at 5279.260 kb on + strand at 5279.260 kb on + strand at 5279.271 kb on + strand at 5279.277 kb on - strand at 5279.434 kb on + strand, within Echvi_4414 at 5279.552 kb on - strand at 5279.706 kb on + strand at 5279.736 kb on + strand at 5279.737 kb on - strand at 5279.737 kb on - strand at 5279.739 kb on - strand at 5279.739 kb on - strand at 5279.795 kb on - strand at 5279.803 kb on + strand at 5279.803 kb on + strand at 5279.803 kb on + strand at 5279.803 kb on + strand at 5279.804 kb on - strand at 5279.804 kb on - strand at 5279.804 kb on - strand at 5279.866 kb on + strand, within Echvi_4415 at 5279.888 kb on + strand, within Echvi_4415 at 5279.941 kb on + strand, within Echvi_4415 at 5279.943 kb on + strand, within Echvi_4415
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 5,276,451 + Echvi_4412 0.42 -0.8 5,276,552 + Echvi_4412 0.49 -0.4 5,276,770 - Echvi_4412 0.63 +1.6 5,276,849 - Echvi_4412 0.68 +1.3 5,276,850 + Echvi_4412 0.68 +1.0 5,276,850 + Echvi_4412 0.68 -1.4 5,276,882 + Echvi_4412 0.71 +1.0 5,276,883 - Echvi_4412 0.71 +0.9 5,276,893 + Echvi_4412 0.71 +0.0 5,276,893 + Echvi_4412 0.71 +0.1 5,276,894 - Echvi_4412 0.71 -0.0 5,276,894 - Echvi_4412 0.71 +1.1 5,276,895 + Echvi_4412 0.71 +0.6 5,276,930 + Echvi_4412 0.74 -0.2 5,276,943 + Echvi_4412 0.75 +0.1 5,277,032 + Echvi_4412 0.80 -0.5 5,277,032 + Echvi_4412 0.80 +0.6 5,277,052 - Echvi_4412 0.82 -0.3 5,277,058 + Echvi_4412 0.82 +0.1 5,277,059 - Echvi_4412 0.82 +1.0 5,277,060 + Echvi_4412 0.82 -1.3 5,277,061 - Echvi_4412 0.82 -0.2 5,277,087 - Echvi_4412 0.84 +0.2 5,277,188 + -1.1 5,277,233 + -1.4 5,277,250 - +0.3 5,277,285 + -1.6 5,277,286 - -0.1 5,277,333 + -0.7 5,277,333 + -0.5 5,277,333 + -0.1 5,277,333 + +0.9 5,277,333 + +0.1 5,277,333 + -0.7 5,277,334 - +0.6 5,277,334 - -0.6 5,277,334 - +1.1 5,277,334 - -1.0 5,277,388 + -0.3 5,277,434 + +0.5 5,277,434 + +1.6 5,277,508 - -0.1 5,277,563 + Echvi_4413 0.13 -0.6 5,277,563 + Echvi_4413 0.13 +0.9 5,277,564 - Echvi_4413 0.13 -0.1 5,277,621 + Echvi_4413 0.16 +0.1 5,277,621 + Echvi_4413 0.16 +0.3 5,277,621 + Echvi_4413 0.16 -1.0 5,277,621 + Echvi_4413 0.16 +0.1 5,277,622 - Echvi_4413 0.16 +0.8 5,277,622 - Echvi_4413 0.16 +1.1 5,277,749 + Echvi_4413 0.23 -0.1 5,277,759 + Echvi_4413 0.24 +1.2 5,277,825 + Echvi_4413 0.28 -0.1 5,277,825 + Echvi_4413 0.28 -0.4 5,277,825 + Echvi_4413 0.28 -0.7 5,277,845 - Echvi_4413 0.29 -0.6 5,277,860 + Echvi_4413 0.30 -1.4 5,277,974 + Echvi_4413 0.36 +0.9 5,277,974 + Echvi_4413 0.36 +0.6 5,277,974 + Echvi_4413 0.36 +0.1 5,277,974 + Echvi_4413 0.36 +1.2 5,277,974 + Echvi_4413 0.36 -1.9 5,278,040 + Echvi_4413 0.40 -2.6 5,278,122 + Echvi_4413 0.45 -1.1 5,278,141 - Echvi_4413 0.46 +1.0 5,278,223 + Echvi_4413 0.51 +0.4 5,278,395 + Echvi_4413 0.61 -0.2 5,278,396 - Echvi_4413 0.61 -2.4 5,278,399 + Echvi_4413 0.61 +0.0 5,278,400 - Echvi_4413 0.61 +1.3 5,278,400 - Echvi_4413 0.61 +0.6 5,278,444 - Echvi_4413 0.63 -1.0 5,278,534 + Echvi_4413 0.69 -0.0 5,278,545 + Echvi_4413 0.69 -2.1 5,278,545 + Echvi_4413 0.69 -0.5 5,278,546 - Echvi_4413 0.69 +0.4 5,278,546 - Echvi_4413 0.69 +0.2 5,278,649 + Echvi_4413 0.75 +0.8 5,278,806 - Echvi_4413 0.84 +1.2 5,278,832 + Echvi_4413 0.86 +0.7 5,278,833 - Echvi_4413 0.86 -0.3 5,278,833 - Echvi_4413 0.86 +0.5 5,278,940 + -0.3 5,278,941 - +2.3 5,278,992 + +0.5 5,279,047 + +0.2 5,279,076 - +0.0 5,279,080 - -0.9 5,279,110 + +0.3 5,279,260 + -1.4 5,279,260 + +0.1 5,279,271 + +0.5 5,279,277 - +1.2 5,279,434 + Echvi_4414 0.16 -0.6 5,279,552 - -1.7 5,279,706 + +1.1 5,279,736 + +1.0 5,279,737 - +1.8 5,279,737 - +1.4 5,279,739 - +1.9 5,279,739 - +1.6 5,279,795 - +3.1 5,279,803 + +1.8 5,279,803 + +3.0 5,279,803 + +1.8 5,279,803 + +0.4 5,279,804 - +2.5 5,279,804 - +3.4 5,279,804 - +2.6 5,279,866 + Echvi_4415 0.18 +2.2 5,279,888 + Echvi_4415 0.23 +2.5 5,279,941 + Echvi_4415 0.33 +2.1 5,279,943 + Echvi_4415 0.34 +2.3
Or see this region's nucleotide sequence