Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1019

Experiment: L-Methionine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Methionine (N)
1,180,730	+		Echvi_1017	0.74	+1.2
1,180,731	-		Echvi_1017	0.74	+0.4
1,180,731	-		Echvi_1017	0.74	+0.8
1,180,731	-		Echvi_1017	0.74	+1.1
1,180,732	+		Echvi_1017	0.74	+0.8
1,180,733	-		Echvi_1017	0.74	-1.6
1,180,746	+		Echvi_1017	0.76	+0.1
1,180,749	+		Echvi_1017	0.76	+0.1
1,180,850	+		Echvi_1017	0.88	-1.2
1,180,851	-		Echvi_1017	0.88	-1.4
1,180,852	+		Echvi_1017	0.88	-0.8
1,180,853	-		Echvi_1017	0.88	-1.0
1,180,853	-		Echvi_1017	0.88	-1.0
1,180,856	+		Echvi_1017	0.89	+0.4
1,180,856	+		Echvi_1017	0.89	+1.4
1,180,857	-		Echvi_1017	0.89	-0.9
1,180,857	-		Echvi_1017	0.89	-0.3
1,180,862	+		Echvi_1017	0.89	+1.0
1,180,863	-		Echvi_1017	0.89	+1.9
1,180,863	-		Echvi_1017	0.89	+0.5
1,180,863	-		Echvi_1017	0.89	+0.3
1,180,863	-		Echvi_1017	0.89	-0.2
1,180,867	+		Echvi_1017	0.90	-1.0
1,180,867	+		Echvi_1017	0.90	-1.2
1,180,867	+		Echvi_1017	0.90	+2.1
1,180,868	-				-0.8
1,180,868	-				-0.3
1,180,872	+				+0.4
1,180,872	+				+0.0
1,180,873	-				-0.6
1,180,873	-				+0.5
1,180,873	-				-1.0
1,180,873	-				+0.2
1,180,873	-				+1.1
1,180,873	-				+1.4
1,180,873	-				-0.8
1,180,873	-				-0.8
1,180,873	-				-1.6
1,180,873	-				-0.6
1,180,881	+				-2.0
1,180,883	+				+3.7
1,180,883	+				+0.1
1,180,883	+				-0.7
1,180,884	-				+0.2
1,180,884	-				-1.7
1,180,884	-				+1.1
1,180,894	-				-1.6
1,180,894	-				-0.9
1,180,916	-				+0.6
1,180,916	-				-1.6
1,180,953	-				-0.2
1,180,972	+				+0.3
1,180,986	+				-0.4
1,180,987	-				-0.3
1,180,988	+				+0.1
1,180,988	+				-0.5
1,180,997	+				+2.1
1,181,009	+				-0.9
1,181,079	+				-1.6
1,181,110	+				-1.2
1,181,110	+				+0.4
1,181,130	+				-0.1
1,181,130	+				+0.4
1,181,130	+				+0.1
1,181,130	+				-0.1
1,181,130	+				+0.2
1,181,130	+				+0.6
1,181,130	+				-1.8
1,181,131	-				+0.6
1,181,134	-				+0.6
1,181,153	+				-0.0
1,181,153	+				+0.1
1,181,161	+				-0.9
1,181,162	-				-0.2
1,181,195	-				+1.6
1,181,197	+				+0.3
1,181,216	-				+1.1
1,181,224	-				-0.7
1,181,228	+				-1.7
1,181,228	+				+1.7
1,181,229	-				+0.8
1,181,229	-				-0.2
1,181,229	-				-0.2
1,181,247	+				-0.1
1,181,293	+				-1.3
1,181,317	-				-0.5
1,181,361	+		Echvi_1018	0.16	+0.5
1,181,361	+		Echvi_1018	0.16	+0.1
1,181,361	+		Echvi_1018	0.16	+1.4
1,181,361	+		Echvi_1018	0.16	+1.1
1,181,361	+		Echvi_1018	0.16	-1.3
1,181,361	+		Echvi_1018	0.16	+1.6
1,181,362	-		Echvi_1018	0.16	+1.5
1,181,362	-		Echvi_1018	0.16	+0.6
1,181,362	-		Echvi_1018	0.16	+0.9
1,181,362	-		Echvi_1018	0.16	-0.3
1,181,362	-		Echvi_1018	0.16	-0.6
1,181,380	+		Echvi_1018	0.20	-1.3
1,181,450	+		Echvi_1018	0.37	-0.2
1,181,451	-		Echvi_1018	0.37	+0.1
1,181,486	-		Echvi_1018	0.46	+1.3
1,181,486	-				+0.1
1,181,486	-		Echvi_1018	0.46	+0.3
1,181,507	-		Echvi_1018	0.51	-0.0
1,181,523	-		Echvi_1018	0.55	-0.4
1,181,523	-		Echvi_1018	0.55	-0.8
1,181,677	-				+1.6
1,181,764	+		Echvi_1019	0.24	-1.5
1,181,765	-		Echvi_1019	0.25	+0.3
1,181,809	+		Echvi_1019	0.45	-0.2
1,181,809	+		Echvi_1019	0.45	+0.4
1,181,810	-		Echvi_1019	0.45	-0.2
1,181,810	-		Echvi_1019	0.45	-0.9
1,181,810	-		Echvi_1019	0.45	+0.1
1,181,810	-		Echvi_1019	0.45	+0.0
1,181,876	-		Echvi_1019	0.75	-1.8
1,181,897	+		Echvi_1019	0.84	+0.7
1,181,897	+		Echvi_1019	0.84	+0.3
1,181,897	+		Echvi_1019	0.84	-2.4
1,181,897	+		Echvi_1019	0.84	+2.1
1,181,898	-		Echvi_1019	0.85	-0.2
1,181,898	-		Echvi_1019	0.85	-0.2
1,181,898	-		Echvi_1019	0.85	-0.7
1,181,919	+				+0.5
1,181,920	-				+0.3
1,181,923	+				+0.3
1,181,923	+				-0.5
1,181,924	-				-0.5
1,181,924	-				-1.7
1,181,924	-				+1.1
1,181,924	-				+0.4
1,181,926	+				-0.0
1,181,927	-				+0.8
1,181,966	+				-0.9
1,181,967	-				-0.5
1,181,997	-				-0.1
1,182,012	+				+0.1
1,182,012	+				+0.6
1,182,021	+				+0.1
1,182,021	+				-0.2
1,182,021	+				+0.7
1,182,038	+				-3.0
1,182,038	+				-0.3
1,182,039	-				-0.7
1,182,042	+				-0.4
1,182,062	+				-2.0
1,182,062	+				-1.6
1,182,079	+				-0.9
1,182,098	+				-0.6
1,182,098	+				-2.7
1,182,099	-				+2.1
1,182,099	-				-0.6
1,182,099	-				-1.9
1,182,099	-				-0.1
1,182,142	-				+0.5
1,182,142	-				-1.1
1,182,165	+				-1.9
1,182,166	-				+0.4
1,182,203	+				+0.1
1,182,203	+				-0.0
1,182,204	-				-0.3
1,182,204	-				-0.4
1,182,204	-				+1.0
1,182,205	+				+1.6
1,182,205	+				-1.9
1,182,205	+				-0.0
1,182,205	+				+0.2
1,182,205	+				-0.6
1,182,205	+				+1.1
1,182,205	+				+0.9
1,182,206	-				-0.1
1,182,206	-				+0.1
1,182,206	-				-1.6
1,182,206	-				-0.1
1,182,206	-				-0.3
1,182,206	-				+0.4
1,182,206	-				-0.6
1,182,206	-				+1.1
1,182,206	-				-1.8
1,182,206	-				-1.8
1,182,214	+				-0.4
1,182,214	+				-0.9
1,182,214	+				-0.7
1,182,215	-				+0.3
1,182,215	-				+0.1
1,182,253	+				-0.9
1,182,258	+				-0.0
1,182,258	+				+0.8
1,182,258	+				-0.9
1,182,258	+				-0.9
1,182,259	-				-0.5
1,182,259	-				+0.2
1,182,259	-				-1.0
1,182,259	-				-0.1
1,182,259	-				-0.8
1,182,259	-				-1.3
1,182,259	-				-0.4
1,182,271	-				+0.6
1,182,271	-				-2.2
1,182,280	-				+0.7
1,182,365	+				-1.4
1,182,365	+				-1.8
1,182,375	+				-0.5
1,182,375	+				-2.1
1,182,443	+				-1.0
1,182,444	-				+0.6
1,182,444	-				-0.9
1,182,473	-		Echvi_1020	0.15	-1.8
1,182,578	+		Echvi_1020	0.37	-1.9
1,182,637	-		Echvi_1020	0.49	-0.7
1,182,691	-		Echvi_1020	0.61	-2.0
1,182,856	+				+0.4
1,182,891	+				+0.6
1,182,891	+				+1.6
1,182,891	+				+0.1
1,182,891	+				-0.7
1,182,891	+				+0.9
1,182,892	-				-1.9
1,182,892	-				-1.1
1,182,899	+				-0.9
1,182,899	+				-0.2
1,182,899	+				-1.8
1,182,900	-				-1.2
1,182,900	-				+0.2
1,182,930	-				-1.3