Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0805 and Echvi_0806 are separated by 321 nucleotides Echvi_0806 and Echvi_0807 are separated by 891 nucleotides
Echvi_0805: Echvi_0805 - Thiol-disulfide isomerase and thioredoxins, at 916,172 to 917,713
_0805
Echvi_0806: Echvi_0806 - seryl-tRNA synthetase, at 918,035 to 919,315
_0806
Echvi_0807: Echvi_0807 - transcription termination factor Rho, at 920,207 to 921,988
_0807
Position (kb)
918
919
920 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 917.127 kb on + strand, within Echvi_0805 at 917.136 kb on - strand, within Echvi_0805 at 917.168 kb on - strand at 917.172 kb on - strand, within Echvi_0805 at 917.201 kb on + strand, within Echvi_0805 at 917.201 kb on + strand, within Echvi_0805 at 917.210 kb on + strand, within Echvi_0805 at 917.210 kb on + strand, within Echvi_0805 at 917.210 kb on + strand, within Echvi_0805 at 917.211 kb on - strand, within Echvi_0805 at 917.211 kb on - strand, within Echvi_0805 at 917.240 kb on - strand, within Echvi_0805 at 917.240 kb on - strand, within Echvi_0805 at 917.247 kb on - strand, within Echvi_0805 at 917.369 kb on + strand, within Echvi_0805 at 917.370 kb on - strand, within Echvi_0805 at 917.466 kb on + strand, within Echvi_0805 at 917.475 kb on - strand, within Echvi_0805 at 917.475 kb on - strand, within Echvi_0805 at 917.475 kb on - strand, within Echvi_0805 at 917.544 kb on + strand, within Echvi_0805 at 917.544 kb on + strand, within Echvi_0805 at 917.545 kb on - strand, within Echvi_0805 at 917.552 kb on + strand, within Echvi_0805 at 917.552 kb on + strand, within Echvi_0805 at 917.552 kb on + strand, within Echvi_0805 at 917.552 kb on + strand, within Echvi_0805 at 917.552 kb on + strand, within Echvi_0805 at 917.552 kb on + strand, within Echvi_0805 at 917.553 kb on - strand, within Echvi_0805 at 917.554 kb on + strand, within Echvi_0805 at 917.554 kb on + strand, within Echvi_0805 at 917.591 kb on + strand at 917.592 kb on - strand at 917.605 kb on + strand at 917.616 kb on - strand at 917.619 kb on + strand at 917.619 kb on + strand at 917.620 kb on - strand at 917.620 kb on - strand at 917.642 kb on - strand at 917.737 kb on + strand at 917.791 kb on - strand at 917.791 kb on - strand at 917.791 kb on - strand at 917.863 kb on - strand at 917.925 kb on + strand at 917.925 kb on + strand at 917.925 kb on + strand at 917.940 kb on + strand at 917.941 kb on - strand at 917.979 kb on - strand at 918.012 kb on + strand at 918.012 kb on + strand at 918.012 kb on + strand at 918.013 kb on - strand at 919.349 kb on - strand at 919.425 kb on + strand at 919.505 kb on + strand at 919.505 kb on + strand at 919.505 kb on + strand at 919.506 kb on - strand at 919.506 kb on - strand at 919.524 kb on + strand at 919.525 kb on - strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.592 kb on + strand at 919.593 kb on - strand at 919.593 kb on - strand at 919.593 kb on - strand at 919.596 kb on + strand at 919.596 kb on + strand at 919.596 kb on + strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.597 kb on - strand at 919.644 kb on - strand at 919.733 kb on + strand at 919.770 kb on - strand at 919.792 kb on + strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.793 kb on - strand at 919.801 kb on + strand at 919.848 kb on - strand at 919.870 kb on - strand at 919.893 kb on - strand at 919.893 kb on - strand at 919.922 kb on - strand at 919.946 kb on + strand at 919.947 kb on - strand at 919.982 kb on + strand at 919.983 kb on - strand at 919.984 kb on + strand at 920.007 kb on - strand at 920.022 kb on - strand at 920.022 kb on - strand at 920.022 kb on - strand at 920.139 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 917,127 + Echvi_0805 0.62 -1.1 917,136 - Echvi_0805 0.63 +0.3 917,168 - +2.1 917,172 - Echvi_0805 0.65 +0.5 917,201 + Echvi_0805 0.67 +0.5 917,201 + Echvi_0805 0.67 -0.6 917,210 + Echvi_0805 0.67 -0.4 917,210 + Echvi_0805 0.67 -1.2 917,210 + Echvi_0805 0.67 +0.9 917,211 - Echvi_0805 0.67 -1.1 917,211 - Echvi_0805 0.67 -1.7 917,240 - Echvi_0805 0.69 -1.0 917,240 - Echvi_0805 0.69 -1.3 917,247 - Echvi_0805 0.70 +1.1 917,369 + Echvi_0805 0.78 -2.0 917,370 - Echvi_0805 0.78 -1.1 917,466 + Echvi_0805 0.84 +0.3 917,475 - Echvi_0805 0.85 -0.5 917,475 - Echvi_0805 0.85 +1.1 917,475 - Echvi_0805 0.85 +0.5 917,544 + Echvi_0805 0.89 -0.5 917,544 + Echvi_0805 0.89 -0.5 917,545 - Echvi_0805 0.89 +0.4 917,552 + Echvi_0805 0.89 -0.5 917,552 + Echvi_0805 0.89 -0.6 917,552 + Echvi_0805 0.89 -0.5 917,552 + Echvi_0805 0.89 -1.8 917,552 + Echvi_0805 0.89 -0.2 917,552 + Echvi_0805 0.89 +0.3 917,553 - Echvi_0805 0.90 +0.7 917,554 + Echvi_0805 0.90 +0.1 917,554 + Echvi_0805 0.90 +0.4 917,591 + +0.4 917,592 - -0.2 917,605 + +0.1 917,616 - -0.3 917,619 + -0.1 917,619 + +0.9 917,620 - +0.5 917,620 - +1.3 917,642 - -0.2 917,737 + -1.1 917,791 - +0.5 917,791 - -0.4 917,791 - -0.9 917,863 - +2.7 917,925 + +0.0 917,925 + +0.2 917,925 + +1.4 917,940 + -2.5 917,941 - +0.2 917,979 - +0.2 918,012 + +0.5 918,012 + +0.1 918,012 + +1.1 918,013 - -0.6 919,349 - -1.0 919,425 + +0.3 919,505 + +1.0 919,505 + +0.3 919,505 + -2.0 919,506 - -0.2 919,506 - -2.0 919,524 + -0.9 919,525 - +0.4 919,592 + -0.1 919,592 + +1.7 919,592 + -0.1 919,592 + -0.2 919,592 + +1.8 919,592 + +1.5 919,593 - +0.6 919,593 - -0.6 919,593 - -0.7 919,596 + -2.0 919,596 + -0.0 919,596 + +0.1 919,597 - -0.4 919,597 - +1.8 919,597 - -1.9 919,597 - +0.9 919,644 - +0.4 919,733 + +1.1 919,770 - +0.0 919,792 + +0.5 919,793 - +0.5 919,793 - -0.6 919,793 - -1.3 919,793 - -0.7 919,801 + +3.1 919,848 - +0.1 919,870 - -0.1 919,893 - +1.9 919,893 - -1.2 919,922 - +0.4 919,946 + +3.5 919,947 - +0.3 919,982 + +0.1 919,983 - -0.0 919,984 + +2.9 920,007 - -0.1 920,022 - -1.9 920,022 - +0.4 920,022 - -0.0 920,139 - +1.1
Or see this region's nucleotide sequence