Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2082

Experiment: m.b. 5-Hydroxymethylfurfural 8 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2080 and B158DRAFT_2081 are separated by 206 nucleotidesB158DRAFT_2081 and B158DRAFT_2082 overlap by 4 nucleotidesB158DRAFT_2082 and B158DRAFT_2083 overlap by 4 nucleotidesB158DRAFT_2083 and B158DRAFT_2084 overlap by 4 nucleotides B158DRAFT_2080: B158DRAFT_2080 - RNA polymerase, sigma 54 subunit, RpoN/SigL, at 219,130 to 220,602 _2080 B158DRAFT_2081: B158DRAFT_2081 - ABC-type (unclassified) transport system, ATPase component, at 220,809 to 221,534 _2081 B158DRAFT_2082: B158DRAFT_2082 - Uncharacterized protein conserved in bacteria, at 221,531 to 222,292 _2082 B158DRAFT_2083: B158DRAFT_2083 - Uncharacterized protein conserved in bacteria, at 222,289 to 222,846 _2083 B158DRAFT_2084: B158DRAFT_2084 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family, at 222,843 to 223,424 _2084 Position (kb) 221 222 223Strain fitness (log2 ratio) -1 0 1at 220.542 kb on + strandat 220.661 kb on + strandat 220.765 kb on + strandat 220.773 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 8 mM
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220,542 + -0.4
220,661 + +0.0
220,765 + -0.5
220,773 - +0.1

Or see this region's nucleotide sequence