Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2073

Experiment: m.b. 5-Hydroxymethylfurfural 8 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2072 and B158DRAFT_2073 are separated by 9 nucleotidesB158DRAFT_2073 and B158DRAFT_2074 are separated by 48 nucleotides B158DRAFT_2072: B158DRAFT_2072 - microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62, at 210,331 to 211,767 _2072 B158DRAFT_2073: B158DRAFT_2073 - Uncharacterized protein conserved in bacteria, at 211,777 to 212,292 _2073 B158DRAFT_2074: B158DRAFT_2074 - Outer membrane receptor for ferrienterochelin and colicins, at 212,341 to 214,479 _2074 Position (kb) 211 212 213Strain fitness (log2 ratio) -1 0 1at 210.820 kb on + strand, within B158DRAFT_2072at 210.929 kb on - strand, within B158DRAFT_2072at 210.935 kb on + strand, within B158DRAFT_2072at 210.940 kb on + strand, within B158DRAFT_2072at 210.940 kb on + strand, within B158DRAFT_2072at 210.943 kb on - strand, within B158DRAFT_2072at 210.943 kb on - strand, within B158DRAFT_2072at 210.948 kb on - strand, within B158DRAFT_2072at 210.948 kb on - strand, within B158DRAFT_2072at 210.948 kb on - strand, within B158DRAFT_2072at 210.972 kb on + strand, within B158DRAFT_2072at 210.975 kb on - strand, within B158DRAFT_2072at 210.982 kb on + strand, within B158DRAFT_2072at 211.054 kb on + strand, within B158DRAFT_2072at 211.054 kb on + strand, within B158DRAFT_2072at 211.054 kb on + strand, within B158DRAFT_2072at 211.062 kb on - strand, within B158DRAFT_2072at 211.062 kb on - strand, within B158DRAFT_2072at 211.062 kb on - strand, within B158DRAFT_2072at 211.069 kb on + strand, within B158DRAFT_2072at 211.069 kb on + strand, within B158DRAFT_2072at 211.111 kb on + strand, within B158DRAFT_2072at 211.151 kb on + strand, within B158DRAFT_2072at 211.169 kb on + strand, within B158DRAFT_2072at 211.210 kb on - strand, within B158DRAFT_2072at 211.245 kb on - strand, within B158DRAFT_2072at 211.268 kb on - strand, within B158DRAFT_2072at 211.310 kb on - strand, within B158DRAFT_2072at 211.310 kb on - strand, within B158DRAFT_2072at 211.360 kb on + strand, within B158DRAFT_2072at 211.360 kb on + strand, within B158DRAFT_2072at 211.360 kb on + strand, within B158DRAFT_2072at 211.368 kb on - strand, within B158DRAFT_2072at 211.408 kb on + strand, within B158DRAFT_2072at 211.415 kb on - strand, within B158DRAFT_2072at 211.416 kb on - strand, within B158DRAFT_2072at 211.423 kb on - strand, within B158DRAFT_2072at 211.581 kb on + strand, within B158DRAFT_2072at 211.581 kb on + strand, within B158DRAFT_2072at 211.581 kb on + strand, within B158DRAFT_2072at 211.581 kb on + strand, within B158DRAFT_2072at 211.589 kb on + strand, within B158DRAFT_2072at 211.589 kb on - strand, within B158DRAFT_2072at 211.597 kb on - strand, within B158DRAFT_2072at 211.602 kb on - strand, within B158DRAFT_2072at 211.618 kb on - strand, within B158DRAFT_2072at 211.828 kb on + strandat 211.881 kb on + strand, within B158DRAFT_2073at 211.929 kb on + strand, within B158DRAFT_2073at 211.929 kb on + strand, within B158DRAFT_2073at 211.929 kb on + strand, within B158DRAFT_2073at 211.929 kb on + strand, within B158DRAFT_2073at 211.960 kb on - strand, within B158DRAFT_2073at 212.047 kb on - strand, within B158DRAFT_2073at 212.050 kb on + strand, within B158DRAFT_2073at 212.142 kb on + strand, within B158DRAFT_2073at 212.268 kb on + strandat 212.276 kb on - strandat 212.294 kb on - strandat 212.391 kb on - strandat 212.416 kb on + strandat 212.471 kb on + strandat 212.476 kb on + strandat 212.476 kb on + strandat 212.484 kb on - strandat 212.571 kb on + strand, within B158DRAFT_2074at 212.579 kb on - strand, within B158DRAFT_2074at 212.692 kb on - strand, within B158DRAFT_2074at 212.762 kb on + strand, within B158DRAFT_2074at 212.770 kb on - strand, within B158DRAFT_2074at 212.836 kb on - strand, within B158DRAFT_2074at 212.840 kb on + strand, within B158DRAFT_2074at 212.840 kb on + strand, within B158DRAFT_2074at 212.876 kb on - strand, within B158DRAFT_2074at 212.968 kb on + strand, within B158DRAFT_2074at 212.985 kb on - strand, within B158DRAFT_2074at 213.059 kb on - strand, within B158DRAFT_2074at 213.092 kb on + strand, within B158DRAFT_2074at 213.241 kb on + strand, within B158DRAFT_2074

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 8 mM
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210,820 + B158DRAFT_2072 0.34 -0.0
210,929 - B158DRAFT_2072 0.42 +0.1
210,935 + B158DRAFT_2072 0.42 -0.4
210,940 + B158DRAFT_2072 0.42 -0.5
210,940 + B158DRAFT_2072 0.42 +0.1
210,943 - B158DRAFT_2072 0.43 -0.7
210,943 - B158DRAFT_2072 0.43 -0.7
210,948 - B158DRAFT_2072 0.43 -0.5
210,948 - B158DRAFT_2072 0.43 -0.2
210,948 - B158DRAFT_2072 0.43 -0.1
210,972 + B158DRAFT_2072 0.45 +0.0
210,975 - B158DRAFT_2072 0.45 -0.3
210,982 + B158DRAFT_2072 0.45 -1.1
211,054 + B158DRAFT_2072 0.50 +0.5
211,054 + B158DRAFT_2072 0.50 -0.5
211,054 + B158DRAFT_2072 0.50 -0.4
211,062 - B158DRAFT_2072 0.51 -0.4
211,062 - B158DRAFT_2072 0.51 -0.2
211,062 - B158DRAFT_2072 0.51 +0.1
211,069 + B158DRAFT_2072 0.51 +0.1
211,069 + B158DRAFT_2072 0.51 -0.1
211,111 + B158DRAFT_2072 0.54 -0.2
211,151 + B158DRAFT_2072 0.57 -0.0
211,169 + B158DRAFT_2072 0.58 -0.2
211,210 - B158DRAFT_2072 0.61 -0.1
211,245 - B158DRAFT_2072 0.64 -0.0
211,268 - B158DRAFT_2072 0.65 -0.5
211,310 - B158DRAFT_2072 0.68 -0.0
211,310 - B158DRAFT_2072 0.68 -0.4
211,360 + B158DRAFT_2072 0.72 -0.3
211,360 + B158DRAFT_2072 0.72 -0.5
211,360 + B158DRAFT_2072 0.72 -0.3
211,368 - B158DRAFT_2072 0.72 -0.6
211,408 + B158DRAFT_2072 0.75 -0.3
211,415 - B158DRAFT_2072 0.75 -0.5
211,416 - B158DRAFT_2072 0.76 -0.6
211,423 - B158DRAFT_2072 0.76 -0.6
211,581 + B158DRAFT_2072 0.87 -0.3
211,581 + B158DRAFT_2072 0.87 -0.0
211,581 + B158DRAFT_2072 0.87 -0.2
211,581 + B158DRAFT_2072 0.87 +0.1
211,589 + B158DRAFT_2072 0.88 +0.1
211,589 - B158DRAFT_2072 0.88 -0.8
211,597 - B158DRAFT_2072 0.88 -0.5
211,602 - B158DRAFT_2072 0.88 -0.5
211,618 - B158DRAFT_2072 0.90 -0.1
211,828 + -0.1
211,881 + B158DRAFT_2073 0.20 -0.5
211,929 + B158DRAFT_2073 0.29 -0.9
211,929 + B158DRAFT_2073 0.29 -0.0
211,929 + B158DRAFT_2073 0.29 -0.4
211,929 + B158DRAFT_2073 0.29 -0.1
211,960 - B158DRAFT_2073 0.35 -0.5
212,047 - B158DRAFT_2073 0.52 -0.2
212,050 + B158DRAFT_2073 0.53 -0.1
212,142 + B158DRAFT_2073 0.71 -0.7
212,268 + -0.2
212,276 - +0.4
212,294 - +0.3
212,391 - +0.2
212,416 + +0.4
212,471 + -0.2
212,476 + +0.4
212,476 + +0.1
212,484 - +0.0
212,571 + B158DRAFT_2074 0.11 -0.4
212,579 - B158DRAFT_2074 0.11 -1.1
212,692 - B158DRAFT_2074 0.16 +0.1
212,762 + B158DRAFT_2074 0.20 -0.2
212,770 - B158DRAFT_2074 0.20 -0.1
212,836 - B158DRAFT_2074 0.23 -0.1
212,840 + B158DRAFT_2074 0.23 -0.1
212,840 + B158DRAFT_2074 0.23 +0.2
212,876 - B158DRAFT_2074 0.25 +0.0
212,968 + B158DRAFT_2074 0.29 -0.6
212,985 - B158DRAFT_2074 0.30 +0.5
213,059 - B158DRAFT_2074 0.34 -0.2
213,092 + B158DRAFT_2074 0.35 +0.4
213,241 + B158DRAFT_2074 0.42 -0.4

Or see this region's nucleotide sequence