Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1158

Experiment: m.b. 5-Hydroxymethylfurfural 8 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1157 and B158DRAFT_1158 are separated by 111 nucleotidesB158DRAFT_1158 and B158DRAFT_1159 are separated by 129 nucleotides B158DRAFT_1157: B158DRAFT_1157 - Exodeoxyribonuclease VII large subunit (EC 3.1.11.6), at 1,193,634 to 1,194,989 _1157 B158DRAFT_1158: B158DRAFT_1158 - inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205), at 1,195,101 to 1,196,564 _1158 B158DRAFT_1159: B158DRAFT_1159 - GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit, at 1,196,694 to 1,198,271 _1159 Position (kb) 1195 1196 1197Strain fitness (log2 ratio) -2 -1 0 1at 1194.116 kb on + strand, within B158DRAFT_1157at 1194.140 kb on + strand, within B158DRAFT_1157at 1194.140 kb on + strand, within B158DRAFT_1157at 1194.148 kb on - strand, within B158DRAFT_1157at 1194.148 kb on - strand, within B158DRAFT_1157at 1194.175 kb on - strand, within B158DRAFT_1157at 1194.199 kb on + strand, within B158DRAFT_1157at 1194.200 kb on + strand, within B158DRAFT_1157at 1194.208 kb on - strand, within B158DRAFT_1157at 1194.208 kb on - strand, within B158DRAFT_1157at 1194.232 kb on + strand, within B158DRAFT_1157at 1194.240 kb on + strand, within B158DRAFT_1157at 1194.248 kb on - strand, within B158DRAFT_1157at 1194.445 kb on - strand, within B158DRAFT_1157at 1194.483 kb on + strand, within B158DRAFT_1157at 1194.483 kb on + strand, within B158DRAFT_1157at 1194.491 kb on - strand, within B158DRAFT_1157at 1194.491 kb on - strand, within B158DRAFT_1157at 1194.491 kb on - strand, within B158DRAFT_1157at 1194.491 kb on - strand, within B158DRAFT_1157at 1194.491 kb on - strand, within B158DRAFT_1157at 1194.491 kb on - strand, within B158DRAFT_1157at 1194.500 kb on - strand, within B158DRAFT_1157at 1194.504 kb on + strand, within B158DRAFT_1157at 1194.504 kb on + strand, within B158DRAFT_1157at 1194.517 kb on - strand, within B158DRAFT_1157at 1194.585 kb on + strand, within B158DRAFT_1157at 1194.592 kb on + strand, within B158DRAFT_1157at 1194.593 kb on - strand, within B158DRAFT_1157at 1194.593 kb on - strand, within B158DRAFT_1157at 1194.598 kb on + strand, within B158DRAFT_1157at 1194.629 kb on - strand, within B158DRAFT_1157at 1194.718 kb on - strand, within B158DRAFT_1157at 1194.720 kb on + strand, within B158DRAFT_1157at 1194.720 kb on + strand, within B158DRAFT_1157at 1194.830 kb on + strand, within B158DRAFT_1157at 1194.845 kb on + strand, within B158DRAFT_1157at 1194.851 kb on + strand, within B158DRAFT_1157at 1194.858 kb on - strandat 1194.859 kb on - strandat 1194.934 kb on + strandat 1194.942 kb on - strandat 1194.942 kb on - strandat 1194.965 kb on - strandat 1196.630 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 8 mM
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1,194,116 + B158DRAFT_1157 0.36 -1.3
1,194,140 + B158DRAFT_1157 0.37 -2.1
1,194,140 + B158DRAFT_1157 0.37 -1.0
1,194,148 - B158DRAFT_1157 0.38 -1.3
1,194,148 - B158DRAFT_1157 0.38 -2.1
1,194,175 - B158DRAFT_1157 0.40 -1.0
1,194,199 + B158DRAFT_1157 0.42 -0.5
1,194,200 + B158DRAFT_1157 0.42 -1.1
1,194,208 - B158DRAFT_1157 0.42 -1.3
1,194,208 - B158DRAFT_1157 0.42 -0.7
1,194,232 + B158DRAFT_1157 0.44 -1.2
1,194,240 + B158DRAFT_1157 0.45 -1.6
1,194,248 - B158DRAFT_1157 0.45 -1.0
1,194,445 - B158DRAFT_1157 0.60 -1.5
1,194,483 + B158DRAFT_1157 0.63 -1.0
1,194,483 + B158DRAFT_1157 0.63 -2.1
1,194,491 - B158DRAFT_1157 0.63 -1.4
1,194,491 - B158DRAFT_1157 0.63 +0.4
1,194,491 - B158DRAFT_1157 0.63 -1.0
1,194,491 - B158DRAFT_1157 0.63 -0.3
1,194,491 - B158DRAFT_1157 0.63 -1.5
1,194,491 - B158DRAFT_1157 0.63 -1.1
1,194,500 - B158DRAFT_1157 0.64 -0.9
1,194,504 + B158DRAFT_1157 0.64 -1.4
1,194,504 + B158DRAFT_1157 0.64 -0.8
1,194,517 - B158DRAFT_1157 0.65 -1.2
1,194,585 + B158DRAFT_1157 0.70 -1.8
1,194,592 + B158DRAFT_1157 0.71 -1.0
1,194,593 - B158DRAFT_1157 0.71 -0.9
1,194,593 - B158DRAFT_1157 0.71 -1.6
1,194,598 + B158DRAFT_1157 0.71 -1.8
1,194,629 - B158DRAFT_1157 0.73 -0.6
1,194,718 - B158DRAFT_1157 0.80 -0.1
1,194,720 + B158DRAFT_1157 0.80 -1.8
1,194,720 + B158DRAFT_1157 0.80 -1.2
1,194,830 + B158DRAFT_1157 0.88 -0.9
1,194,845 + B158DRAFT_1157 0.89 -1.0
1,194,851 + B158DRAFT_1157 0.90 +0.8
1,194,858 - -0.4
1,194,859 - -2.2
1,194,934 + -1.6
1,194,942 - -1.0
1,194,942 - +0.8
1,194,965 - -1.4
1,196,630 + +0.2

Or see this region's nucleotide sequence