Experiment: m.b. 5-Hydroxymethylfurfural 8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1135 and B158DRAFT_1136 are separated by 110 nucleotides B158DRAFT_1136 and B158DRAFT_1137 are separated by 106 nucleotides B158DRAFT_1137 and B158DRAFT_1138 overlap by 14 nucleotides
B158DRAFT_1135: B158DRAFT_1135 - ATPase components of ABC transporters with duplicated ATPase domains, at 1,173,234 to 1,175,189
_1135
B158DRAFT_1136: B158DRAFT_1136 - Holliday junction DNA helicase subunit RuvB, at 1,175,300 to 1,176,319
_1136
B158DRAFT_1137: B158DRAFT_1137 - tol-pal system-associated acyl-CoA thioesterase, at 1,176,426 to 1,176,845
_1137
B158DRAFT_1138: B158DRAFT_1138 - Cell division and transport-associated protein TolQ (TC 2.C.1.2.1), at 1,176,832 to 1,177,545
_1138
Position (kb)
1175
1176
1177 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1174.307 kb on + strand, within B158DRAFT_1135 at 1174.310 kb on - strand, within B158DRAFT_1135 at 1174.348 kb on - strand, within B158DRAFT_1135 at 1174.376 kb on + strand, within B158DRAFT_1135 at 1174.376 kb on - strand, within B158DRAFT_1135 at 1174.428 kb on - strand, within B158DRAFT_1135 at 1174.475 kb on + strand, within B158DRAFT_1135 at 1174.482 kb on - strand, within B158DRAFT_1135 at 1174.482 kb on - strand, within B158DRAFT_1135 at 1174.490 kb on + strand, within B158DRAFT_1135 at 1174.497 kb on - strand, within B158DRAFT_1135 at 1174.531 kb on - strand, within B158DRAFT_1135 at 1174.531 kb on - strand, within B158DRAFT_1135 at 1174.587 kb on + strand, within B158DRAFT_1135 at 1174.594 kb on - strand, within B158DRAFT_1135 at 1174.625 kb on + strand, within B158DRAFT_1135 at 1174.715 kb on + strand, within B158DRAFT_1135 at 1174.723 kb on - strand, within B158DRAFT_1135 at 1174.736 kb on + strand, within B158DRAFT_1135 at 1174.744 kb on - strand, within B158DRAFT_1135 at 1174.744 kb on - strand, within B158DRAFT_1135 at 1174.775 kb on + strand, within B158DRAFT_1135 at 1174.783 kb on - strand, within B158DRAFT_1135 at 1174.783 kb on - strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.790 kb on + strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.798 kb on - strand, within B158DRAFT_1135 at 1174.822 kb on + strand, within B158DRAFT_1135 at 1174.926 kb on + strand, within B158DRAFT_1135 at 1174.926 kb on + strand, within B158DRAFT_1135 at 1174.934 kb on - strand, within B158DRAFT_1135 at 1174.934 kb on - strand, within B158DRAFT_1135 at 1174.934 kb on - strand, within B158DRAFT_1135 at 1174.968 kb on + strand, within B158DRAFT_1135 at 1174.969 kb on - strand, within B158DRAFT_1135 at 1174.969 kb on - strand, within B158DRAFT_1135 at 1174.969 kb on - strand, within B158DRAFT_1135 at 1175.026 kb on + strand at 1175.026 kb on + strand at 1175.034 kb on - strand at 1175.035 kb on - strand at 1175.047 kb on + strand at 1175.062 kb on + strand at 1175.091 kb on + strand at 1175.103 kb on + strand at 1175.103 kb on + strand at 1175.110 kb on + strand at 1175.110 kb on + strand at 1175.110 kb on + strand at 1175.111 kb on - strand at 1175.118 kb on - strand at 1175.118 kb on - strand at 1175.118 kb on - strand at 1175.118 kb on - strand at 1175.142 kb on + strand at 1175.148 kb on - strand at 1175.259 kb on + strand at 1175.283 kb on + strand at 1175.459 kb on + strand, within B158DRAFT_1136 at 1175.479 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.564 kb on - strand, within B158DRAFT_1136 at 1175.565 kb on - strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.607 kb on + strand, within B158DRAFT_1136 at 1175.610 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.615 kb on - strand, within B158DRAFT_1136 at 1175.627 kb on - strand, within B158DRAFT_1136 at 1175.649 kb on + strand, within B158DRAFT_1136 at 1175.657 kb on - strand, within B158DRAFT_1136 at 1175.682 kb on - strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.795 kb on + strand, within B158DRAFT_1136 at 1175.831 kb on + strand, within B158DRAFT_1136 at 1175.831 kb on + strand, within B158DRAFT_1136 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1175.839 kb on - strand, within B158DRAFT_1136 at 1176.060 kb on - strand, within B158DRAFT_1136 at 1176.077 kb on + strand, within B158DRAFT_1136 at 1176.085 kb on - strand, within B158DRAFT_1136 at 1176.116 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.134 kb on + strand, within B158DRAFT_1136 at 1176.142 kb on - strand, within B158DRAFT_1136 at 1176.246 kb on - strand at 1176.428 kb on - strand at 1176.623 kb on + strand, within B158DRAFT_1137
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 8 mM remove 1,174,307 + B158DRAFT_1135 0.55 -1.6 1,174,310 - B158DRAFT_1135 0.55 -1.0 1,174,348 - B158DRAFT_1135 0.57 -1.6 1,174,376 + B158DRAFT_1135 0.58 -0.9 1,174,376 - B158DRAFT_1135 0.58 -1.3 1,174,428 - B158DRAFT_1135 0.61 -1.0 1,174,475 + B158DRAFT_1135 0.63 -1.6 1,174,482 - B158DRAFT_1135 0.64 -2.1 1,174,482 - B158DRAFT_1135 0.64 -1.3 1,174,490 + B158DRAFT_1135 0.64 -1.2 1,174,497 - B158DRAFT_1135 0.65 -1.8 1,174,531 - B158DRAFT_1135 0.66 -1.4 1,174,531 - B158DRAFT_1135 0.66 -1.5 1,174,587 + B158DRAFT_1135 0.69 -1.5 1,174,594 - B158DRAFT_1135 0.70 -1.2 1,174,625 + B158DRAFT_1135 0.71 -1.0 1,174,715 + B158DRAFT_1135 0.76 -1.9 1,174,723 - B158DRAFT_1135 0.76 -1.8 1,174,736 + B158DRAFT_1135 0.77 -1.0 1,174,744 - B158DRAFT_1135 0.77 -1.0 1,174,744 - B158DRAFT_1135 0.77 -0.9 1,174,775 + B158DRAFT_1135 0.79 -0.7 1,174,783 - B158DRAFT_1135 0.79 -1.2 1,174,783 - B158DRAFT_1135 0.79 -1.1 1,174,790 + B158DRAFT_1135 0.80 -1.1 1,174,790 + B158DRAFT_1135 0.80 -0.6 1,174,790 + B158DRAFT_1135 0.80 -0.4 1,174,790 + B158DRAFT_1135 0.80 -1.2 1,174,790 + B158DRAFT_1135 0.80 +0.2 1,174,798 - B158DRAFT_1135 0.80 -1.0 1,174,798 - B158DRAFT_1135 0.80 -0.3 1,174,798 - B158DRAFT_1135 0.80 -0.0 1,174,798 - B158DRAFT_1135 0.80 -1.2 1,174,798 - B158DRAFT_1135 0.80 -0.1 1,174,822 + B158DRAFT_1135 0.81 -0.9 1,174,926 + B158DRAFT_1135 0.87 -1.4 1,174,926 + B158DRAFT_1135 0.87 -1.2 1,174,934 - B158DRAFT_1135 0.87 -0.2 1,174,934 - B158DRAFT_1135 0.87 -1.0 1,174,934 - B158DRAFT_1135 0.87 -1.4 1,174,968 + B158DRAFT_1135 0.89 -1.5 1,174,969 - B158DRAFT_1135 0.89 -1.9 1,174,969 - B158DRAFT_1135 0.89 -1.6 1,174,969 - B158DRAFT_1135 0.89 -1.3 1,175,026 + -2.0 1,175,026 + -1.4 1,175,034 - -1.3 1,175,035 - -1.6 1,175,047 + -1.9 1,175,062 + -1.5 1,175,091 + -1.1 1,175,103 + -1.3 1,175,103 + -1.7 1,175,110 + -1.6 1,175,110 + -1.9 1,175,110 + -2.6 1,175,111 - -1.4 1,175,118 - -0.9 1,175,118 - -1.2 1,175,118 - -1.2 1,175,118 - -1.4 1,175,142 + -1.0 1,175,148 - -0.6 1,175,259 + -2.0 1,175,283 + -2.5 1,175,459 + B158DRAFT_1136 0.16 -0.0 1,175,479 - B158DRAFT_1136 0.18 -1.4 1,175,564 - B158DRAFT_1136 0.26 -1.3 1,175,564 - B158DRAFT_1136 0.26 -3.7 1,175,564 - B158DRAFT_1136 0.26 -1.4 1,175,564 - B158DRAFT_1136 0.26 +0.4 1,175,565 - B158DRAFT_1136 0.26 -1.2 1,175,607 + B158DRAFT_1136 0.30 -2.0 1,175,607 + B158DRAFT_1136 0.30 -2.1 1,175,607 + B158DRAFT_1136 0.30 -1.2 1,175,610 - B158DRAFT_1136 0.30 -2.8 1,175,615 - B158DRAFT_1136 0.31 -1.3 1,175,615 - B158DRAFT_1136 0.31 +0.2 1,175,615 - B158DRAFT_1136 0.31 -2.0 1,175,615 - B158DRAFT_1136 0.31 +0.2 1,175,627 - B158DRAFT_1136 0.32 -0.8 1,175,649 + B158DRAFT_1136 0.34 -2.9 1,175,657 - B158DRAFT_1136 0.35 -1.4 1,175,682 - B158DRAFT_1136 0.37 -2.0 1,175,795 + B158DRAFT_1136 0.49 -2.1 1,175,795 + B158DRAFT_1136 0.49 -0.9 1,175,795 + B158DRAFT_1136 0.49 -1.8 1,175,795 + B158DRAFT_1136 0.49 -2.2 1,175,831 + B158DRAFT_1136 0.52 -1.7 1,175,831 + B158DRAFT_1136 0.52 -0.8 1,175,839 - B158DRAFT_1136 0.53 -0.9 1,175,839 - B158DRAFT_1136 0.53 -2.3 1,176,060 - B158DRAFT_1136 0.75 -2.1 1,176,077 + B158DRAFT_1136 0.76 -2.4 1,176,085 - B158DRAFT_1136 0.77 -1.8 1,176,116 + B158DRAFT_1136 0.80 -1.0 1,176,134 + B158DRAFT_1136 0.82 -0.9 1,176,134 + B158DRAFT_1136 0.82 -1.0 1,176,142 - B158DRAFT_1136 0.83 -1.6 1,176,246 - -1.3 1,176,428 - -0.6 1,176,623 + B158DRAFT_1137 0.47 +0.2
Or see this region's nucleotide sequence