Experiment: m.b. 5-Hydroxymethylfurfural 8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0826 and B158DRAFT_0827 overlap by 14 nucleotides B158DRAFT_0827 and B158DRAFT_0828 are separated by 254 nucleotides B158DRAFT_0828 and B158DRAFT_0829 are separated by 3 nucleotides B158DRAFT_0829 and B158DRAFT_0830 are separated by 13 nucleotides
B158DRAFT_0826: B158DRAFT_0826 - drug resistance transporter, Bcr/CflA subfamily, at 837,950 to 839,134
_0826
B158DRAFT_0827: B158DRAFT_0827 - acyl-phosphate glycerol 3-phosphate acyltransferase, at 839,121 to 839,726
_0827
B158DRAFT_0828: B158DRAFT_0828 - dihydroneopterin aldolase, at 839,981 to 840,334
_0828
B158DRAFT_0829: B158DRAFT_0829 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 840,338 to 840,835
_0829
B158DRAFT_0830: B158DRAFT_0830 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 840,849 to 841,565
_0830
Position (kb) 839
840
841 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 839.000 kb on + strand, within B158DRAFT_0826 at 839.000 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.005 kb on + strand, within B158DRAFT_0826 at 839.013 kb on - strand, within B158DRAFT_0826 at 839.020 kb on + strand at 839.020 kb on + strand at 839.028 kb on - strand at 839.043 kb on + strand at 839.043 kb on + strand at 839.043 kb on + strand at 839.051 kb on - strand at 839.060 kb on + strand at 839.076 kb on - strand at 839.076 kb on - strand at 839.087 kb on + strand at 839.088 kb on - strand at 839.299 kb on - strand, within B158DRAFT_0827 at 839.334 kb on - strand, within B158DRAFT_0827 at 839.356 kb on + strand, within B158DRAFT_0827 at 839.383 kb on - strand, within B158DRAFT_0827 at 839.408 kb on - strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.437 kb on + strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.445 kb on - strand, within B158DRAFT_0827 at 839.499 kb on - strand, within B158DRAFT_0827 at 839.560 kb on - strand, within B158DRAFT_0827 at 839.586 kb on + strand, within B158DRAFT_0827 at 839.608 kb on - strand, within B158DRAFT_0827 at 839.608 kb on - strand, within B158DRAFT_0827 at 839.686 kb on + strand at 839.686 kb on + strand at 839.694 kb on - strand at 839.733 kb on + strand at 839.733 kb on + strand at 839.733 kb on + strand at 839.740 kb on - strand at 839.741 kb on - strand at 839.767 kb on - strand at 839.769 kb on + strand at 839.777 kb on - strand at 839.781 kb on - strand at 839.781 kb on - strand at 839.792 kb on - strand at 839.812 kb on + strand at 839.885 kb on + strand at 839.885 kb on + strand at 839.938 kb on + strand at 840.383 kb on + strand at 840.496 kb on + strand, within B158DRAFT_0829 at 840.504 kb on - strand, within B158DRAFT_0829 at 840.544 kb on + strand, within B158DRAFT_0829 at 840.653 kb on + strand, within B158DRAFT_0829 at 840.672 kb on + strand, within B158DRAFT_0829 at 840.683 kb on + strand, within B158DRAFT_0829 at 840.683 kb on + strand, within B158DRAFT_0829 at 840.690 kb on + strand, within B158DRAFT_0829 at 840.690 kb on + strand, within B158DRAFT_0829 at 840.698 kb on - strand, within B158DRAFT_0829 at 840.698 kb on - strand, within B158DRAFT_0829 at 840.698 kb on - strand, within B158DRAFT_0829 at 840.820 kb on - strand at 840.910 kb on + strand at 840.910 kb on + strand at 840.910 kb on + strand at 840.917 kb on - strand at 840.918 kb on - strand at 840.918 kb on - strand at 840.918 kb on - strand at 840.918 kb on - strand at 840.918 kb on - strand at 840.918 kb on - strand at 840.929 kb on + strand, within B158DRAFT_0830 at 840.930 kb on + strand, within B158DRAFT_0830 at 841.037 kb on + strand, within B158DRAFT_0830 at 841.051 kb on + strand, within B158DRAFT_0830 at 841.054 kb on + strand, within B158DRAFT_0830 at 841.067 kb on + strand, within B158DRAFT_0830 at 841.075 kb on - strand, within B158DRAFT_0830 at 841.080 kb on + strand, within B158DRAFT_0830 at 841.083 kb on - strand, within B158DRAFT_0830 at 841.231 kb on - strand, within B158DRAFT_0830 at 841.254 kb on + strand, within B158DRAFT_0830 at 841.292 kb on + strand, within B158DRAFT_0830 at 841.296 kb on - strand, within B158DRAFT_0830 at 841.298 kb on - strand, within B158DRAFT_0830
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 8 mM remove 839,000 + B158DRAFT_0826 0.89 -0.4 839,000 + B158DRAFT_0826 0.89 -1.0 839,005 + B158DRAFT_0826 0.89 -1.2 839,005 + B158DRAFT_0826 0.89 -0.6 839,005 + B158DRAFT_0826 0.89 +0.2 839,005 + B158DRAFT_0826 0.89 -2.9 839,013 - B158DRAFT_0826 0.90 -1.0 839,020 + -0.7 839,020 + -0.1 839,028 - -0.8 839,043 + -0.5 839,043 + -0.9 839,043 + -0.4 839,051 - -1.0 839,060 + -1.0 839,076 - -0.8 839,076 - -1.0 839,087 + -0.4 839,088 - -0.7 839,299 - B158DRAFT_0827 0.29 +0.4 839,334 - B158DRAFT_0827 0.35 +0.3 839,356 + B158DRAFT_0827 0.39 -0.4 839,383 - B158DRAFT_0827 0.43 +0.6 839,408 - B158DRAFT_0827 0.47 +0.1 839,437 + B158DRAFT_0827 0.52 +1.5 839,437 + B158DRAFT_0827 0.52 -0.2 839,437 + B158DRAFT_0827 0.52 -0.4 839,437 + B158DRAFT_0827 0.52 -1.0 839,437 + B158DRAFT_0827 0.52 -0.4 839,445 - B158DRAFT_0827 0.53 -0.8 839,445 - B158DRAFT_0827 0.53 +0.2 839,445 - B158DRAFT_0827 0.53 +0.1 839,445 - B158DRAFT_0827 0.53 +0.0 839,499 - B158DRAFT_0827 0.62 -0.8 839,560 - B158DRAFT_0827 0.72 +0.1 839,586 + B158DRAFT_0827 0.77 -0.5 839,608 - B158DRAFT_0827 0.80 -0.1 839,608 - B158DRAFT_0827 0.80 -0.6 839,686 + -0.5 839,686 + -0.8 839,694 - -0.9 839,733 + -0.2 839,733 + -0.7 839,733 + -0.6 839,740 - -0.1 839,741 - -0.1 839,767 - +0.5 839,769 + -0.4 839,777 - +0.3 839,781 - +0.4 839,781 - +0.4 839,792 - +0.8 839,812 + -0.4 839,885 + +0.0 839,885 + -0.3 839,938 + -0.5 840,383 + -0.9 840,496 + B158DRAFT_0829 0.32 +1.5 840,504 - B158DRAFT_0829 0.33 +0.6 840,544 + B158DRAFT_0829 0.41 -0.5 840,653 + B158DRAFT_0829 0.63 -0.4 840,672 + B158DRAFT_0829 0.67 -0.1 840,683 + B158DRAFT_0829 0.69 -0.4 840,683 + B158DRAFT_0829 0.69 -0.3 840,690 + B158DRAFT_0829 0.71 -0.3 840,690 + B158DRAFT_0829 0.71 +0.0 840,698 - B158DRAFT_0829 0.72 +0.1 840,698 - B158DRAFT_0829 0.72 +0.5 840,698 - B158DRAFT_0829 0.72 +0.1 840,820 - +0.1 840,910 + -0.2 840,910 + +0.4 840,910 + -0.1 840,917 - +0.1 840,918 - +0.5 840,918 - +0.3 840,918 - -0.3 840,918 - -0.3 840,918 - +0.2 840,918 - +0.3 840,929 + B158DRAFT_0830 0.11 -0.5 840,930 + B158DRAFT_0830 0.11 -1.2 841,037 + B158DRAFT_0830 0.26 -0.3 841,051 + B158DRAFT_0830 0.28 -0.4 841,054 + B158DRAFT_0830 0.29 -0.4 841,067 + B158DRAFT_0830 0.30 -0.3 841,075 - B158DRAFT_0830 0.32 +0.1 841,080 + B158DRAFT_0830 0.32 -0.8 841,083 - B158DRAFT_0830 0.33 +0.7 841,231 - B158DRAFT_0830 0.53 +0.2 841,254 + B158DRAFT_0830 0.56 -0.4 841,292 + B158DRAFT_0830 0.62 +0.3 841,296 - B158DRAFT_0830 0.62 -0.1 841,298 - B158DRAFT_0830 0.63 +0.7
Or see this region's nucleotide sequence