Experiment: m.b. 5-Hydroxymethylfurfural 8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0668 and B158DRAFT_0669 overlap by 20 nucleotides B158DRAFT_0669 and B158DRAFT_0670 are separated by 13 nucleotides B158DRAFT_0670 and B158DRAFT_0671 overlap by 8 nucleotides B158DRAFT_0671 and B158DRAFT_0672 are separated by 18 nucleotides
B158DRAFT_0668: B158DRAFT_0668 - Uncharacterized conserved protein, at 671,475 to 672,260
_0668
B158DRAFT_0669: B158DRAFT_0669 - hypothetical protein, at 672,241 to 672,852
_0669
B158DRAFT_0670: B158DRAFT_0670 - Uncharacterized protein required for cytochrome oxidase assembly, at 672,866 to 673,975
_0670
B158DRAFT_0671: B158DRAFT_0671 - protoheme IX farnesyltransferase, at 673,968 to 674,915
_0671
B158DRAFT_0672: B158DRAFT_0672 - Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems, at 674,934 to 675,584
_0672
Position (kb) 672
673
674 Strain fitness (log2 ratio) -1
0
1
2 at 671.913 kb on + strand, within B158DRAFT_0668 at 671.921 kb on - strand, within B158DRAFT_0668 at 671.921 kb on - strand, within B158DRAFT_0668 at 671.928 kb on + strand, within B158DRAFT_0668 at 671.928 kb on - strand, within B158DRAFT_0668 at 671.950 kb on + strand, within B158DRAFT_0668 at 672.057 kb on - strand, within B158DRAFT_0668 at 672.098 kb on + strand, within B158DRAFT_0668 at 672.100 kb on - strand, within B158DRAFT_0668 at 672.104 kb on - strand, within B158DRAFT_0668 at 672.141 kb on + strand, within B158DRAFT_0668 at 672.168 kb on + strand, within B158DRAFT_0668 at 672.235 kb on + strand at 672.312 kb on - strand, within B158DRAFT_0669 at 672.348 kb on + strand, within B158DRAFT_0669 at 672.368 kb on - strand, within B158DRAFT_0669 at 672.386 kb on + strand, within B158DRAFT_0669 at 672.409 kb on - strand, within B158DRAFT_0669 at 672.466 kb on - strand, within B158DRAFT_0669 at 672.478 kb on + strand, within B158DRAFT_0669 at 672.545 kb on + strand, within B158DRAFT_0669 at 672.545 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.550 kb on + strand, within B158DRAFT_0669 at 672.551 kb on + strand, within B158DRAFT_0669 at 672.553 kb on - strand, within B158DRAFT_0669 at 672.553 kb on - strand, within B158DRAFT_0669 at 672.553 kb on - strand, within B158DRAFT_0669 at 672.558 kb on - strand, within B158DRAFT_0669 at 672.558 kb on - strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.637 kb on + strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.645 kb on - strand, within B158DRAFT_0669 at 672.685 kb on + strand, within B158DRAFT_0669 at 672.688 kb on - strand, within B158DRAFT_0669 at 672.690 kb on + strand, within B158DRAFT_0669 at 672.705 kb on + strand, within B158DRAFT_0669 at 672.798 kb on + strand at 672.806 kb on - strand at 672.808 kb on - strand at 672.813 kb on - strand at 672.832 kb on + strand at 672.837 kb on + strand at 672.837 kb on + strand at 672.837 kb on + strand at 672.837 kb on + strand at 672.947 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.962 kb on + strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.970 kb on - strand at 672.998 kb on - strand, within B158DRAFT_0670 at 673.017 kb on + strand, within B158DRAFT_0670 at 673.070 kb on + strand, within B158DRAFT_0670 at 673.104 kb on + strand, within B158DRAFT_0670 at 673.118 kb on + strand, within B158DRAFT_0670 at 673.128 kb on + strand, within B158DRAFT_0670 at 673.169 kb on + strand, within B158DRAFT_0670 at 673.202 kb on - strand, within B158DRAFT_0670 at 673.270 kb on - strand, within B158DRAFT_0670 at 673.299 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.412 kb on - strand, within B158DRAFT_0670 at 673.550 kb on + strand, within B158DRAFT_0670 at 673.558 kb on - strand, within B158DRAFT_0670 at 673.567 kb on + strand, within B158DRAFT_0670 at 673.575 kb on - strand, within B158DRAFT_0670 at 673.606 kb on + strand, within B158DRAFT_0670 at 673.606 kb on + strand, within B158DRAFT_0670 at 673.618 kb on + strand, within B158DRAFT_0670 at 673.621 kb on - strand, within B158DRAFT_0670 at 673.725 kb on + strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.771 kb on - strand, within B158DRAFT_0670 at 673.789 kb on - strand, within B158DRAFT_0670 at 673.798 kb on + strand, within B158DRAFT_0670 at 673.798 kb on + strand, within B158DRAFT_0670 at 673.798 kb on + strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670 at 673.806 kb on - strand, within B158DRAFT_0670 at 673.959 kb on + strand at 674.024 kb on - strand at 674.063 kb on + strand, within B158DRAFT_0671 at 674.100 kb on - strand, within B158DRAFT_0671 at 674.116 kb on - strand, within B158DRAFT_0671 at 674.162 kb on - strand, within B158DRAFT_0671 at 674.169 kb on + strand, within B158DRAFT_0671 at 674.177 kb on - strand, within B158DRAFT_0671 at 674.214 kb on + strand, within B158DRAFT_0671 at 674.231 kb on + strand, within B158DRAFT_0671 at 674.254 kb on - strand, within B158DRAFT_0671 at 674.373 kb on + strand, within B158DRAFT_0671 at 674.374 kb on + strand, within B158DRAFT_0671 at 674.397 kb on + strand, within B158DRAFT_0671 at 674.527 kb on - strand, within B158DRAFT_0671 at 674.527 kb on - strand, within B158DRAFT_0671 at 674.766 kb on - strand, within B158DRAFT_0671 at 674.830 kb on + strand at 674.838 kb on - strand at 674.838 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 8 mM remove 671,913 + B158DRAFT_0668 0.56 +1.8 671,921 - B158DRAFT_0668 0.57 +1.0 671,921 - B158DRAFT_0668 0.57 +0.8 671,928 + B158DRAFT_0668 0.58 +1.3 671,928 - B158DRAFT_0668 0.58 -0.0 671,950 + B158DRAFT_0668 0.60 +1.1 672,057 - B158DRAFT_0668 0.74 +1.1 672,098 + B158DRAFT_0668 0.79 +1.0 672,100 - B158DRAFT_0668 0.80 +0.7 672,104 - B158DRAFT_0668 0.80 +1.6 672,141 + B158DRAFT_0668 0.85 +0.8 672,168 + B158DRAFT_0668 0.88 +1.0 672,235 + +0.0 672,312 - B158DRAFT_0669 0.12 +0.4 672,348 + B158DRAFT_0669 0.17 -1.5 672,368 - B158DRAFT_0669 0.21 +0.8 672,386 + B158DRAFT_0669 0.24 +1.8 672,409 - B158DRAFT_0669 0.27 +0.2 672,466 - B158DRAFT_0669 0.37 +1.0 672,478 + B158DRAFT_0669 0.39 +0.7 672,545 + B158DRAFT_0669 0.50 +0.4 672,545 + B158DRAFT_0669 0.50 +0.6 672,550 + B158DRAFT_0669 0.50 +1.1 672,550 + B158DRAFT_0669 0.50 +1.0 672,550 + B158DRAFT_0669 0.50 +0.1 672,550 + B158DRAFT_0669 0.50 +0.7 672,551 + B158DRAFT_0669 0.51 +0.9 672,553 - B158DRAFT_0669 0.51 +0.9 672,553 - B158DRAFT_0669 0.51 +1.1 672,553 - B158DRAFT_0669 0.51 +0.4 672,558 - B158DRAFT_0669 0.52 +0.2 672,558 - B158DRAFT_0669 0.52 +0.1 672,637 + B158DRAFT_0669 0.65 +0.3 672,637 + B158DRAFT_0669 0.65 +0.3 672,637 + B158DRAFT_0669 0.65 +0.2 672,637 + B158DRAFT_0669 0.65 +0.5 672,637 + B158DRAFT_0669 0.65 +0.5 672,637 + B158DRAFT_0669 0.65 -0.2 672,645 - B158DRAFT_0669 0.66 +0.6 672,645 - B158DRAFT_0669 0.66 +0.4 672,645 - B158DRAFT_0669 0.66 +0.4 672,645 - B158DRAFT_0669 0.66 +1.2 672,645 - B158DRAFT_0669 0.66 +1.6 672,645 - B158DRAFT_0669 0.66 +1.4 672,685 + B158DRAFT_0669 0.73 +0.3 672,688 - B158DRAFT_0669 0.73 +0.0 672,690 + B158DRAFT_0669 0.73 +0.5 672,705 + B158DRAFT_0669 0.76 +0.4 672,798 + +1.2 672,806 - +0.8 672,808 - +0.5 672,813 - +0.6 672,832 + -0.0 672,837 + -0.3 672,837 + -0.2 672,837 + +0.1 672,837 + +0.1 672,947 + +0.7 672,962 + -0.1 672,962 + +1.2 672,962 + -0.2 672,962 + +0.5 672,962 + +0.6 672,962 + +1.3 672,970 - +0.9 672,970 - +0.9 672,970 - +0.3 672,970 - -0.1 672,970 - +0.5 672,970 - +1.0 672,970 - +0.6 672,998 - B158DRAFT_0670 0.12 +0.8 673,017 + B158DRAFT_0670 0.14 +0.5 673,070 + B158DRAFT_0670 0.18 +0.6 673,104 + B158DRAFT_0670 0.21 +0.2 673,118 + B158DRAFT_0670 0.23 +0.5 673,128 + B158DRAFT_0670 0.24 +0.6 673,169 + B158DRAFT_0670 0.27 +0.5 673,202 - B158DRAFT_0670 0.30 +0.6 673,270 - B158DRAFT_0670 0.36 +1.2 673,299 - B158DRAFT_0670 0.39 +0.6 673,412 - B158DRAFT_0670 0.49 +1.5 673,412 - B158DRAFT_0670 0.49 +0.6 673,412 - B158DRAFT_0670 0.49 +0.5 673,412 - B158DRAFT_0670 0.49 +0.7 673,412 - B158DRAFT_0670 0.49 +0.4 673,550 + B158DRAFT_0670 0.62 -0.1 673,558 - B158DRAFT_0670 0.62 +0.4 673,567 + B158DRAFT_0670 0.63 +1.2 673,575 - B158DRAFT_0670 0.64 +0.6 673,606 + B158DRAFT_0670 0.67 +0.5 673,606 + B158DRAFT_0670 0.67 +0.6 673,618 + B158DRAFT_0670 0.68 +1.3 673,621 - B158DRAFT_0670 0.68 +0.9 673,725 + B158DRAFT_0670 0.77 +1.8 673,771 - B158DRAFT_0670 0.82 +0.5 673,771 - B158DRAFT_0670 0.82 +0.6 673,771 - B158DRAFT_0670 0.82 +0.7 673,771 - B158DRAFT_0670 0.82 +0.6 673,771 - B158DRAFT_0670 0.82 +1.0 673,771 - B158DRAFT_0670 0.82 +0.7 673,789 - B158DRAFT_0670 0.83 +0.9 673,798 + B158DRAFT_0670 0.84 +0.5 673,798 + B158DRAFT_0670 0.84 +0.4 673,798 + B158DRAFT_0670 0.84 +0.3 673,806 - B158DRAFT_0670 0.85 +0.1 673,806 - B158DRAFT_0670 0.85 +0.8 673,806 - B158DRAFT_0670 0.85 +0.7 673,806 - B158DRAFT_0670 0.85 +1.0 673,959 + -0.3 674,024 - +0.7 674,063 + B158DRAFT_0671 0.10 +0.7 674,100 - B158DRAFT_0671 0.14 +0.6 674,116 - B158DRAFT_0671 0.16 +1.8 674,162 - B158DRAFT_0671 0.20 +2.5 674,169 + B158DRAFT_0671 0.21 +0.0 674,177 - B158DRAFT_0671 0.22 +0.1 674,214 + B158DRAFT_0671 0.26 +0.5 674,231 + B158DRAFT_0671 0.28 +0.4 674,254 - B158DRAFT_0671 0.30 -0.5 674,373 + B158DRAFT_0671 0.43 +0.7 674,374 + B158DRAFT_0671 0.43 -0.5 674,397 + B158DRAFT_0671 0.45 +0.9 674,527 - B158DRAFT_0671 0.59 +0.8 674,527 - B158DRAFT_0671 0.59 +1.2 674,766 - B158DRAFT_0671 0.84 +0.4 674,830 + +0.6 674,838 - +0.6 674,838 - +1.3
Or see this region's nucleotide sequence