Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0176

Experiment: m.b. 5-Hydroxymethylfurfural 8 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0175 and B158DRAFT_0176 are separated by 72 nucleotidesB158DRAFT_0176 and B158DRAFT_0177 are separated by 400 nucleotides B158DRAFT_0175: B158DRAFT_0175 - hypothetical protein, at 172,230 to 175,724 _0175 B158DRAFT_0176: B158DRAFT_0176 - Kef-type K+ transport systems, predicted NAD-binding component, at 175,797 to 176,654 _0176 B158DRAFT_0177: B158DRAFT_0177 - methionine adenosyltransferase (EC 2.5.1.6), at 177,055 to 178,215 _0177 Position (kb) 175 176 177Strain fitness (log2 ratio) -1 0 1at 174.813 kb on - strand, within B158DRAFT_0175at 175.194 kb on + strand, within B158DRAFT_0175at 175.270 kb on - strand, within B158DRAFT_0175at 175.273 kb on + strand, within B158DRAFT_0175at 175.273 kb on + strand, within B158DRAFT_0175at 175.273 kb on + strand, within B158DRAFT_0175at 175.273 kb on + strand, within B158DRAFT_0175at 175.281 kb on - strand, within B158DRAFT_0175at 175.327 kb on + strand, within B158DRAFT_0175at 175.335 kb on - strand, within B158DRAFT_0175at 175.446 kb on - strandat 175.457 kb on + strandat 175.465 kb on - strandat 175.688 kb on - strandat 176.029 kb on - strand, within B158DRAFT_0176at 176.036 kb on + strand, within B158DRAFT_0176at 176.113 kb on + strand, within B158DRAFT_0176at 176.123 kb on + strand, within B158DRAFT_0176at 176.133 kb on + strand, within B158DRAFT_0176at 176.143 kb on + strand, within B158DRAFT_0176at 176.371 kb on - strand, within B158DRAFT_0176at 176.371 kb on - strand, within B158DRAFT_0176at 176.371 kb on - strand, within B158DRAFT_0176at 176.371 kb on - strand, within B158DRAFT_0176at 176.424 kb on + strand, within B158DRAFT_0176at 176.432 kb on - strand, within B158DRAFT_0176at 176.432 kb on - strand, within B158DRAFT_0176at 176.464 kb on + strand, within B158DRAFT_0176at 176.472 kb on - strand, within B158DRAFT_0176at 176.479 kb on + strand, within B158DRAFT_0176at 176.479 kb on + strand, within B158DRAFT_0176at 176.487 kb on - strand, within B158DRAFT_0176at 176.487 kb on - strand, within B158DRAFT_0176at 176.520 kb on + strand, within B158DRAFT_0176at 176.601 kb on + strandat 176.660 kb on - strandat 176.775 kb on + strandat 176.775 kb on + strandat 176.775 kb on + strandat 176.775 kb on + strandat 176.783 kb on - strandat 176.783 kb on - strandat 176.783 kb on - strandat 176.942 kb on + strandat 176.942 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 5-Hydroxymethylfurfural 8 mM
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174,813 - B158DRAFT_0175 0.74 -0.4
175,194 + B158DRAFT_0175 0.85 -0.1
175,270 - B158DRAFT_0175 0.87 -0.5
175,273 + B158DRAFT_0175 0.87 +0.8
175,273 + B158DRAFT_0175 0.87 -0.1
175,273 + B158DRAFT_0175 0.87 -0.3
175,273 + B158DRAFT_0175 0.87 +0.3
175,281 - B158DRAFT_0175 0.87 -0.3
175,327 + B158DRAFT_0175 0.89 -0.0
175,335 - B158DRAFT_0175 0.89 -0.9
175,446 - +0.2
175,457 + -0.0
175,465 - -0.2
175,688 - -0.4
176,029 - B158DRAFT_0176 0.27 -0.4
176,036 + B158DRAFT_0176 0.28 -0.7
176,113 + B158DRAFT_0176 0.37 -0.0
176,123 + B158DRAFT_0176 0.38 -0.8
176,133 + B158DRAFT_0176 0.39 -0.1
176,143 + B158DRAFT_0176 0.40 +0.1
176,371 - B158DRAFT_0176 0.67 +0.2
176,371 - B158DRAFT_0176 0.67 -0.2
176,371 - B158DRAFT_0176 0.67 -1.0
176,371 - B158DRAFT_0176 0.67 -0.2
176,424 + B158DRAFT_0176 0.73 -0.0
176,432 - B158DRAFT_0176 0.74 -0.8
176,432 - B158DRAFT_0176 0.74 -0.3
176,464 + B158DRAFT_0176 0.78 -0.0
176,472 - B158DRAFT_0176 0.79 -0.0
176,479 + B158DRAFT_0176 0.79 -0.1
176,479 + B158DRAFT_0176 0.79 -0.6
176,487 - B158DRAFT_0176 0.80 -0.1
176,487 - B158DRAFT_0176 0.80 -0.1
176,520 + B158DRAFT_0176 0.84 -0.7
176,601 + -0.3
176,660 - +0.1
176,775 + -0.2
176,775 + -0.2
176,775 + +0.1
176,775 + -0.2
176,783 - -0.5
176,783 - +0.1
176,783 - +0.2
176,942 + +0.4
176,942 + +0.2

Or see this region's nucleotide sequence