Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4679 and Echvi_4680 are separated by 234 nucleotides Echvi_4680 and Echvi_4681 are separated by 99 nucleotides
Echvi_4679: Echvi_4679 - ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components, at 5,600,976 to 5,601,989
_4679
Echvi_4680: Echvi_4680 - Transcriptional regulators, at 5,602,224 to 5,602,655
_4680
Echvi_4681: Echvi_4681 - Thioredoxin reductase, at 5,602,755 to 5,603,759
_4681
Position (kb)
5602
5603 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5601.289 kb on + strand, within Echvi_4679 at 5601.290 kb on - strand, within Echvi_4679 at 5601.292 kb on + strand, within Echvi_4679 at 5601.315 kb on - strand, within Echvi_4679 at 5601.580 kb on + strand, within Echvi_4679 at 5601.580 kb on + strand, within Echvi_4679 at 5601.707 kb on + strand, within Echvi_4679 at 5601.777 kb on - strand, within Echvi_4679 at 5601.863 kb on + strand, within Echvi_4679 at 5601.899 kb on + strand at 5601.914 kb on + strand at 5601.933 kb on - strand at 5601.995 kb on + strand at 5601.995 kb on + strand at 5601.995 kb on + strand at 5601.995 kb on + strand at 5601.996 kb on - strand at 5601.996 kb on - strand at 5601.996 kb on - strand at 5602.030 kb on + strand at 5602.031 kb on - strand at 5602.031 kb on - strand at 5602.034 kb on - strand at 5602.120 kb on - strand at 5602.282 kb on + strand, within Echvi_4680 at 5602.290 kb on + strand, within Echvi_4680 at 5602.290 kb on + strand, within Echvi_4680 at 5602.312 kb on + strand, within Echvi_4680 at 5602.312 kb on + strand, within Echvi_4680 at 5602.421 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.444 kb on + strand, within Echvi_4680 at 5602.461 kb on + strand, within Echvi_4680 at 5602.654 kb on - strand at 5602.694 kb on + strand at 5602.745 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 5,601,289 + Echvi_4679 0.31 +1.0 5,601,290 - Echvi_4679 0.31 +0.5 5,601,292 + Echvi_4679 0.31 -0.8 5,601,315 - Echvi_4679 0.33 -0.5 5,601,580 + Echvi_4679 0.60 +0.6 5,601,580 + Echvi_4679 0.60 -1.0 5,601,707 + Echvi_4679 0.72 -0.6 5,601,777 - Echvi_4679 0.79 -0.9 5,601,863 + Echvi_4679 0.87 -0.1 5,601,899 + -1.8 5,601,914 + -1.4 5,601,933 - -1.0 5,601,995 + +0.5 5,601,995 + -0.7 5,601,995 + +1.5 5,601,995 + -1.7 5,601,996 - -1.6 5,601,996 - -2.1 5,601,996 - +1.2 5,602,030 + +2.7 5,602,031 - -0.3 5,602,031 - -0.8 5,602,034 - +0.9 5,602,120 - -0.5 5,602,282 + Echvi_4680 0.13 +1.8 5,602,290 + Echvi_4680 0.15 +0.5 5,602,290 + Echvi_4680 0.15 -1.7 5,602,312 + Echvi_4680 0.20 -0.6 5,602,312 + Echvi_4680 0.20 -0.4 5,602,421 + Echvi_4680 0.46 +1.4 5,602,444 + Echvi_4680 0.51 +2.5 5,602,444 + Echvi_4680 0.51 -1.5 5,602,444 + Echvi_4680 0.51 -0.3 5,602,444 + Echvi_4680 0.51 +1.0 5,602,444 + Echvi_4680 0.51 -2.0 5,602,444 + Echvi_4680 0.51 -0.3 5,602,444 + Echvi_4680 0.51 +0.6 5,602,444 + Echvi_4680 0.51 +1.4 5,602,461 + Echvi_4680 0.55 -1.4 5,602,654 - -1.1 5,602,694 + -1.1 5,602,745 + +1.8
Or see this region's nucleotide sequence