Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4427 and Echvi_4428 are separated by 517 nucleotides Echvi_4428 and Echvi_4429 are separated by 158 nucleotides Echvi_4429 and Echvi_4430 overlap by 38 nucleotides
Echvi_4427: Echvi_4427 - Transcriptional regulator, at 5,295,115 to 5,295,720
_4427
Echvi_4428: Echvi_4428 - Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain, at 5,296,238 to 5,299,924
_4428
Echvi_4429: Echvi_4429 - tRNA, at 5,300,083 to 5,300,158
_4429
Echvi_4430: Echvi_4430 - Site-specific recombinases, DNA invertase Pin homologs, at 5,300,121 to 5,301,671
_4430
Position (kb)
5296
5297
5298
5299
5300 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5295.315 kb on + strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.316 kb on - strand, within Echvi_4427 at 5295.447 kb on - strand, within Echvi_4427 at 5295.468 kb on - strand, within Echvi_4427 at 5295.558 kb on + strand, within Echvi_4427 at 5295.602 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.656 kb on + strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.657 kb on - strand, within Echvi_4427 at 5295.700 kb on + strand at 5295.701 kb on - strand at 5295.962 kb on + strand at 5295.994 kb on + strand at 5296.088 kb on + strand at 5296.093 kb on - strand at 5296.156 kb on + strand at 5299.990 kb on - strand at 5300.201 kb on + strand at 5300.208 kb on + strand at 5300.208 kb on + strand at 5300.209 kb on - strand at 5300.219 kb on + strand at 5300.231 kb on + strand at 5300.288 kb on + strand, within Echvi_4430 at 5300.314 kb on - strand, within Echvi_4430 at 5300.454 kb on + strand, within Echvi_4430 at 5300.498 kb on + strand, within Echvi_4430 at 5300.519 kb on - strand, within Echvi_4430 at 5300.559 kb on + strand, within Echvi_4430 at 5300.560 kb on - strand, within Echvi_4430 at 5300.641 kb on - strand, within Echvi_4430 at 5300.646 kb on + strand, within Echvi_4430 at 5300.646 kb on + strand, within Echvi_4430 at 5300.651 kb on + strand, within Echvi_4430 at 5300.668 kb on + strand, within Echvi_4430 at 5300.696 kb on + strand, within Echvi_4430 at 5300.700 kb on + strand, within Echvi_4430 at 5300.700 kb on + strand, within Echvi_4430 at 5300.700 kb on + strand, within Echvi_4430 at 5300.701 kb on - strand, within Echvi_4430 at 5300.714 kb on + strand, within Echvi_4430 at 5300.738 kb on + strand, within Echvi_4430 at 5300.738 kb on + strand, within Echvi_4430 at 5300.738 kb on + strand, within Echvi_4430 at 5300.738 kb on + strand, within Echvi_4430 at 5300.738 kb on + strand, within Echvi_4430 at 5300.738 kb on + strand, within Echvi_4430 at 5300.738 kb on + strand, within Echvi_4430 at 5300.749 kb on + strand, within Echvi_4430 at 5300.749 kb on + strand, within Echvi_4430 at 5300.755 kb on + strand, within Echvi_4430 at 5300.758 kb on + strand, within Echvi_4430 at 5300.768 kb on + strand, within Echvi_4430 at 5300.768 kb on + strand, within Echvi_4430 at 5300.789 kb on + strand, within Echvi_4430 at 5300.808 kb on - strand, within Echvi_4430 at 5300.817 kb on + strand, within Echvi_4430 at 5300.850 kb on + strand, within Echvi_4430
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 5,295,315 + Echvi_4427 0.33 +0.4 5,295,316 - Echvi_4427 0.33 -0.6 5,295,316 - Echvi_4427 0.33 +0.6 5,295,316 - Echvi_4427 0.33 +0.9 5,295,447 - Echvi_4427 0.55 -0.0 5,295,468 - Echvi_4427 0.58 +1.2 5,295,558 + Echvi_4427 0.73 +1.2 5,295,602 + Echvi_4427 0.80 -1.2 5,295,656 + Echvi_4427 0.89 +0.8 5,295,656 + Echvi_4427 0.89 -2.9 5,295,656 + Echvi_4427 0.89 -2.1 5,295,656 + Echvi_4427 0.89 +0.0 5,295,656 + Echvi_4427 0.89 +0.0 5,295,656 + Echvi_4427 0.89 -0.3 5,295,656 + Echvi_4427 0.89 -3.2 5,295,656 + Echvi_4427 0.89 -0.7 5,295,656 + Echvi_4427 0.89 +1.7 5,295,656 + Echvi_4427 0.89 +0.5 5,295,656 + Echvi_4427 0.89 +0.1 5,295,657 - Echvi_4427 0.89 -0.3 5,295,657 - Echvi_4427 0.89 -0.4 5,295,657 - Echvi_4427 0.89 +0.4 5,295,657 - Echvi_4427 0.89 -1.1 5,295,657 - Echvi_4427 0.89 -0.2 5,295,657 - Echvi_4427 0.89 -0.3 5,295,657 - Echvi_4427 0.89 -1.3 5,295,657 - Echvi_4427 0.89 -0.6 5,295,657 - Echvi_4427 0.89 +0.3 5,295,700 + -0.7 5,295,701 - -0.2 5,295,962 + -2.6 5,295,994 + -1.2 5,296,088 + +1.3 5,296,093 - +1.5 5,296,156 + -0.7 5,299,990 - +0.0 5,300,201 + -0.4 5,300,208 + -0.8 5,300,208 + -0.0 5,300,209 - +0.0 5,300,219 + +1.2 5,300,231 + +0.6 5,300,288 + Echvi_4430 0.11 +0.5 5,300,314 - Echvi_4430 0.12 -1.4 5,300,454 + Echvi_4430 0.21 -0.2 5,300,498 + Echvi_4430 0.24 +0.4 5,300,519 - Echvi_4430 0.26 -1.0 5,300,559 + Echvi_4430 0.28 -0.4 5,300,560 - Echvi_4430 0.28 -0.2 5,300,641 - Echvi_4430 0.34 +2.2 5,300,646 + Echvi_4430 0.34 -0.4 5,300,646 + Echvi_4430 0.34 -1.5 5,300,651 + Echvi_4430 0.34 +0.2 5,300,668 + Echvi_4430 0.35 -0.3 5,300,696 + Echvi_4430 0.37 +1.2 5,300,700 + Echvi_4430 0.37 -0.2 5,300,700 + Echvi_4430 0.37 -0.3 5,300,700 + Echvi_4430 0.37 -1.0 5,300,701 - Echvi_4430 0.37 +0.2 5,300,714 + Echvi_4430 0.38 +0.1 5,300,738 + Echvi_4430 0.40 -0.6 5,300,738 + Echvi_4430 0.40 +0.0 5,300,738 + Echvi_4430 0.40 +1.8 5,300,738 + Echvi_4430 0.40 +1.1 5,300,738 + Echvi_4430 0.40 -0.2 5,300,738 + Echvi_4430 0.40 -0.2 5,300,738 + Echvi_4430 0.40 -2.3 5,300,749 + Echvi_4430 0.40 +0.5 5,300,749 + Echvi_4430 0.40 +0.6 5,300,755 + Echvi_4430 0.41 +0.3 5,300,758 + Echvi_4430 0.41 -0.6 5,300,768 + Echvi_4430 0.42 +0.1 5,300,768 + Echvi_4430 0.42 +0.8 5,300,789 + Echvi_4430 0.43 +2.8 5,300,808 - Echvi_4430 0.44 +0.5 5,300,817 + Echvi_4430 0.45 -3.1 5,300,850 + Echvi_4430 0.47 +2.2
Or see this region's nucleotide sequence