Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2965 and Echvi_2966 are separated by 128 nucleotides Echvi_2966 and Echvi_2967 are separated by 64 nucleotides
Echvi_2965: Echvi_2965 - Uncharacterized protein conserved in archaea, at 3,542,264 to 3,543,370
_2965
Echvi_2966: Echvi_2966 - Glycosyltransferase, at 3,543,499 to 3,544,539
_2966
Echvi_2967: Echvi_2967 - Glycosyltransferase, at 3,544,604 to 3,545,650
_2967
Position (kb)
3543
3544
3545 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3542.506 kb on - strand, within Echvi_2965 at 3542.516 kb on - strand, within Echvi_2965 at 3542.516 kb on - strand, within Echvi_2965 at 3542.516 kb on - strand, within Echvi_2965 at 3542.635 kb on + strand, within Echvi_2965 at 3542.635 kb on + strand, within Echvi_2965 at 3542.636 kb on - strand, within Echvi_2965 at 3542.637 kb on + strand, within Echvi_2965 at 3542.637 kb on + strand, within Echvi_2965 at 3542.638 kb on - strand, within Echvi_2965 at 3542.655 kb on - strand, within Echvi_2965 at 3542.659 kb on + strand, within Echvi_2965 at 3542.721 kb on - strand, within Echvi_2965 at 3542.722 kb on + strand, within Echvi_2965 at 3542.722 kb on + strand, within Echvi_2965 at 3542.722 kb on + strand, within Echvi_2965 at 3542.723 kb on - strand, within Echvi_2965 at 3542.726 kb on + strand, within Echvi_2965 at 3542.726 kb on + strand, within Echvi_2965 at 3542.727 kb on - strand, within Echvi_2965 at 3542.727 kb on - strand, within Echvi_2965 at 3542.737 kb on - strand, within Echvi_2965 at 3542.776 kb on + strand, within Echvi_2965 at 3542.870 kb on + strand, within Echvi_2965 at 3542.870 kb on + strand, within Echvi_2965 at 3542.873 kb on + strand, within Echvi_2965 at 3542.875 kb on + strand, within Echvi_2965 at 3542.875 kb on + strand, within Echvi_2965 at 3542.875 kb on + strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.876 kb on - strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.906 kb on + strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.907 kb on - strand, within Echvi_2965 at 3542.911 kb on - strand, within Echvi_2965 at 3542.911 kb on - strand, within Echvi_2965 at 3542.911 kb on - strand, within Echvi_2965 at 3543.008 kb on + strand, within Echvi_2965 at 3543.013 kb on + strand, within Echvi_2965 at 3543.014 kb on - strand, within Echvi_2965 at 3543.025 kb on + strand, within Echvi_2965 at 3543.026 kb on - strand, within Echvi_2965 at 3543.069 kb on - strand, within Echvi_2965 at 3543.069 kb on - strand, within Echvi_2965 at 3543.079 kb on + strand, within Echvi_2965 at 3543.080 kb on - strand, within Echvi_2965 at 3543.113 kb on + strand, within Echvi_2965 at 3543.142 kb on + strand, within Echvi_2965 at 3543.162 kb on + strand, within Echvi_2965 at 3543.163 kb on - strand, within Echvi_2965 at 3543.165 kb on - strand, within Echvi_2965 at 3543.165 kb on - strand, within Echvi_2965 at 3543.167 kb on + strand, within Echvi_2965 at 3543.167 kb on + strand, within Echvi_2965 at 3543.168 kb on - strand, within Echvi_2965 at 3543.168 kb on - strand, within Echvi_2965 at 3543.173 kb on + strand, within Echvi_2965 at 3543.227 kb on - strand, within Echvi_2965 at 3543.231 kb on + strand, within Echvi_2965 at 3543.231 kb on + strand, within Echvi_2965 at 3543.232 kb on - strand, within Echvi_2965 at 3543.247 kb on + strand, within Echvi_2965 at 3543.247 kb on + strand, within Echvi_2965 at 3543.248 kb on - strand, within Echvi_2965 at 3543.282 kb on - strand at 3543.315 kb on - strand at 3543.322 kb on + strand at 3543.353 kb on - strand at 3543.397 kb on - strand at 3543.419 kb on - strand at 3543.466 kb on - strand at 3543.472 kb on + strand at 3543.506 kb on - strand at 3543.506 kb on - strand at 3543.518 kb on + strand at 3543.535 kb on - strand at 3543.599 kb on - strand at 3543.666 kb on + strand, within Echvi_2966 at 3543.666 kb on + strand, within Echvi_2966 at 3543.669 kb on + strand, within Echvi_2966 at 3543.670 kb on - strand, within Echvi_2966 at 3543.673 kb on - strand, within Echvi_2966 at 3543.675 kb on + strand, within Echvi_2966 at 3543.675 kb on + strand, within Echvi_2966 at 3543.676 kb on - strand, within Echvi_2966 at 3543.688 kb on + strand, within Echvi_2966 at 3543.688 kb on + strand, within Echvi_2966 at 3543.689 kb on - strand, within Echvi_2966 at 3543.706 kb on - strand, within Echvi_2966 at 3543.710 kb on - strand, within Echvi_2966 at 3543.718 kb on - strand, within Echvi_2966 at 3543.751 kb on - strand, within Echvi_2966 at 3543.782 kb on - strand, within Echvi_2966 at 3543.800 kb on - strand, within Echvi_2966 at 3543.813 kb on + strand, within Echvi_2966 at 3543.814 kb on - strand, within Echvi_2966 at 3543.814 kb on - strand, within Echvi_2966 at 3543.844 kb on + strand, within Echvi_2966 at 3543.850 kb on - strand, within Echvi_2966 at 3543.865 kb on + strand, within Echvi_2966 at 3543.866 kb on - strand, within Echvi_2966 at 3543.886 kb on + strand, within Echvi_2966 at 3543.939 kb on - strand, within Echvi_2966 at 3543.986 kb on + strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3543.987 kb on - strand, within Echvi_2966 at 3544.010 kb on - strand, within Echvi_2966 at 3544.060 kb on + strand, within Echvi_2966 at 3544.062 kb on + strand, within Echvi_2966 at 3544.062 kb on + strand, within Echvi_2966 at 3544.128 kb on - strand, within Echvi_2966 at 3544.158 kb on + strand, within Echvi_2966 at 3544.158 kb on + strand, within Echvi_2966 at 3544.159 kb on - strand, within Echvi_2966 at 3544.159 kb on - strand, within Echvi_2966 at 3544.159 kb on - strand, within Echvi_2966 at 3544.173 kb on - strand, within Echvi_2966 at 3544.203 kb on + strand, within Echvi_2966 at 3544.207 kb on + strand, within Echvi_2966 at 3544.228 kb on + strand, within Echvi_2966 at 3544.228 kb on + strand, within Echvi_2966 at 3544.229 kb on - strand, within Echvi_2966 at 3544.229 kb on - strand, within Echvi_2966 at 3544.229 kb on - strand, within Echvi_2966 at 3544.265 kb on - strand, within Echvi_2966 at 3544.278 kb on + strand, within Echvi_2966 at 3544.317 kb on - strand, within Echvi_2966 at 3544.339 kb on + strand, within Echvi_2966 at 3544.357 kb on + strand, within Echvi_2966 at 3544.358 kb on - strand, within Echvi_2966 at 3544.458 kb on + strand at 3544.458 kb on + strand at 3544.513 kb on - strand at 3544.533 kb on - strand at 3544.540 kb on - strand at 3544.540 kb on - strand at 3544.544 kb on - strand at 3544.605 kb on + strand at 3544.725 kb on - strand, within Echvi_2967 at 3544.728 kb on - strand, within Echvi_2967 at 3544.784 kb on - strand, within Echvi_2967 at 3544.799 kb on + strand, within Echvi_2967 at 3544.799 kb on + strand, within Echvi_2967 at 3544.799 kb on + strand, within Echvi_2967 at 3544.799 kb on + strand at 3544.801 kb on + strand, within Echvi_2967 at 3544.802 kb on - strand, within Echvi_2967 at 3544.886 kb on + strand, within Echvi_2967 at 3544.886 kb on + strand, within Echvi_2967 at 3544.887 kb on - strand, within Echvi_2967 at 3544.906 kb on + strand, within Echvi_2967 at 3544.910 kb on + strand, within Echvi_2967 at 3544.911 kb on - strand, within Echvi_2967 at 3544.911 kb on - strand, within Echvi_2967 at 3544.919 kb on - strand, within Echvi_2967 at 3544.944 kb on + strand, within Echvi_2967 at 3544.956 kb on - strand, within Echvi_2967 at 3545.020 kb on + strand, within Echvi_2967 at 3545.121 kb on - strand, within Echvi_2967 at 3545.139 kb on + strand, within Echvi_2967 at 3545.140 kb on - strand, within Echvi_2967 at 3545.159 kb on + strand, within Echvi_2967 at 3545.213 kb on + strand, within Echvi_2967 at 3545.224 kb on + strand, within Echvi_2967 at 3545.224 kb on + strand, within Echvi_2967 at 3545.225 kb on - strand, within Echvi_2967 at 3545.225 kb on - strand, within Echvi_2967 at 3545.307 kb on - strand, within Echvi_2967 at 3545.426 kb on + strand, within Echvi_2967 at 3545.426 kb on + strand, within Echvi_2967 at 3545.426 kb on + strand, within Echvi_2967 at 3545.427 kb on - strand, within Echvi_2967 at 3545.427 kb on - strand, within Echvi_2967 at 3545.428 kb on + strand, within Echvi_2967 at 3545.429 kb on - strand, within Echvi_2967 at 3545.458 kb on + strand, within Echvi_2967 at 3545.459 kb on - strand, within Echvi_2967 at 3545.459 kb on - strand, within Echvi_2967 at 3545.464 kb on - strand, within Echvi_2967 at 3545.473 kb on + strand, within Echvi_2967 at 3545.510 kb on + strand, within Echvi_2967 at 3545.513 kb on - strand, within Echvi_2967 at 3545.513 kb on - strand, within Echvi_2967
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 3,542,506 - Echvi_2965 0.22 -0.9 3,542,516 - Echvi_2965 0.23 -1.5 3,542,516 - Echvi_2965 0.23 +1.1 3,542,516 - Echvi_2965 0.23 +0.8 3,542,635 + Echvi_2965 0.34 -1.5 3,542,635 + Echvi_2965 0.34 -0.0 3,542,636 - Echvi_2965 0.34 -1.6 3,542,637 + Echvi_2965 0.34 -0.4 3,542,637 + Echvi_2965 0.34 +0.9 3,542,638 - Echvi_2965 0.34 +1.0 3,542,655 - Echvi_2965 0.35 +0.2 3,542,659 + Echvi_2965 0.36 +0.2 3,542,721 - Echvi_2965 0.41 +1.3 3,542,722 + Echvi_2965 0.41 -1.5 3,542,722 + Echvi_2965 0.41 -0.4 3,542,722 + Echvi_2965 0.41 -1.3 3,542,723 - Echvi_2965 0.41 +0.3 3,542,726 + Echvi_2965 0.42 +1.1 3,542,726 + Echvi_2965 0.42 +2.3 3,542,727 - Echvi_2965 0.42 -0.5 3,542,727 - Echvi_2965 0.42 -0.7 3,542,737 - Echvi_2965 0.43 -1.2 3,542,776 + Echvi_2965 0.46 -0.6 3,542,870 + Echvi_2965 0.55 -1.2 3,542,870 + Echvi_2965 0.55 +0.5 3,542,873 + Echvi_2965 0.55 +0.5 3,542,875 + Echvi_2965 0.55 -1.0 3,542,875 + Echvi_2965 0.55 -0.9 3,542,875 + Echvi_2965 0.55 +2.2 3,542,876 - Echvi_2965 0.55 -0.0 3,542,876 - Echvi_2965 0.55 +0.1 3,542,876 - Echvi_2965 0.55 -0.4 3,542,876 - Echvi_2965 0.55 +0.7 3,542,906 + Echvi_2965 0.58 +1.4 3,542,906 + Echvi_2965 0.58 -0.8 3,542,906 + Echvi_2965 0.58 +0.7 3,542,906 + Echvi_2965 0.58 +0.6 3,542,907 - Echvi_2965 0.58 +0.5 3,542,907 - Echvi_2965 0.58 -0.6 3,542,907 - Echvi_2965 0.58 +0.5 3,542,907 - Echvi_2965 0.58 +1.3 3,542,911 - Echvi_2965 0.58 -1.2 3,542,911 - Echvi_2965 0.58 +1.1 3,542,911 - Echvi_2965 0.58 -2.9 3,543,008 + Echvi_2965 0.67 +1.2 3,543,013 + Echvi_2965 0.68 -0.3 3,543,014 - Echvi_2965 0.68 -0.1 3,543,025 + Echvi_2965 0.69 +0.7 3,543,026 - Echvi_2965 0.69 -0.2 3,543,069 - Echvi_2965 0.73 +0.3 3,543,069 - Echvi_2965 0.73 -1.1 3,543,079 + Echvi_2965 0.74 -0.4 3,543,080 - Echvi_2965 0.74 -1.0 3,543,113 + Echvi_2965 0.77 -0.7 3,543,142 + Echvi_2965 0.79 +0.2 3,543,162 + Echvi_2965 0.81 -1.1 3,543,163 - Echvi_2965 0.81 -1.3 3,543,165 - Echvi_2965 0.81 +0.4 3,543,165 - Echvi_2965 0.81 -1.4 3,543,167 + Echvi_2965 0.82 +0.5 3,543,167 + Echvi_2965 0.82 +0.6 3,543,168 - Echvi_2965 0.82 +0.9 3,543,168 - Echvi_2965 0.82 +0.1 3,543,173 + Echvi_2965 0.82 -1.8 3,543,227 - Echvi_2965 0.87 -1.2 3,543,231 + Echvi_2965 0.87 +0.3 3,543,231 + Echvi_2965 0.87 +0.4 3,543,232 - Echvi_2965 0.87 +1.3 3,543,247 + Echvi_2965 0.89 +0.3 3,543,247 + Echvi_2965 0.89 -0.6 3,543,248 - Echvi_2965 0.89 +1.3 3,543,282 - -0.2 3,543,315 - -1.9 3,543,322 + +0.7 3,543,353 - +0.4 3,543,397 - +1.2 3,543,419 - +2.2 3,543,466 - -0.7 3,543,472 + -0.0 3,543,506 - -0.1 3,543,506 - -2.1 3,543,518 + -0.0 3,543,535 - -0.4 3,543,599 - -0.9 3,543,666 + Echvi_2966 0.16 +0.0 3,543,666 + Echvi_2966 0.16 +0.2 3,543,669 + Echvi_2966 0.16 +0.2 3,543,670 - Echvi_2966 0.16 -0.5 3,543,673 - Echvi_2966 0.17 +0.8 3,543,675 + Echvi_2966 0.17 +0.8 3,543,675 + Echvi_2966 0.17 +2.0 3,543,676 - Echvi_2966 0.17 +2.5 3,543,688 + Echvi_2966 0.18 -1.5 3,543,688 + Echvi_2966 0.18 -1.3 3,543,689 - Echvi_2966 0.18 +0.8 3,543,706 - Echvi_2966 0.20 -2.3 3,543,710 - Echvi_2966 0.20 -0.7 3,543,718 - Echvi_2966 0.21 -0.2 3,543,751 - Echvi_2966 0.24 -1.9 3,543,782 - Echvi_2966 0.27 +1.1 3,543,800 - Echvi_2966 0.29 +0.2 3,543,813 + Echvi_2966 0.30 -0.0 3,543,814 - Echvi_2966 0.30 -0.3 3,543,814 - Echvi_2966 0.30 +2.8 3,543,844 + Echvi_2966 0.33 -0.7 3,543,850 - Echvi_2966 0.34 +0.8 3,543,865 + Echvi_2966 0.35 -1.9 3,543,866 - Echvi_2966 0.35 +1.3 3,543,886 + Echvi_2966 0.37 +1.9 3,543,939 - Echvi_2966 0.42 -0.0 3,543,986 + Echvi_2966 0.47 +1.0 3,543,987 - Echvi_2966 0.47 -1.8 3,543,987 - Echvi_2966 0.47 -1.6 3,543,987 - Echvi_2966 0.47 -2.0 3,543,987 - Echvi_2966 0.47 -0.5 3,543,987 - Echvi_2966 0.47 +0.2 3,544,010 - Echvi_2966 0.49 +0.5 3,544,060 + Echvi_2966 0.54 +1.7 3,544,062 + Echvi_2966 0.54 +0.8 3,544,062 + Echvi_2966 0.54 -1.1 3,544,128 - Echvi_2966 0.60 +0.2 3,544,158 + Echvi_2966 0.63 +1.7 3,544,158 + Echvi_2966 0.63 -0.3 3,544,159 - Echvi_2966 0.63 +0.5 3,544,159 - Echvi_2966 0.63 +1.0 3,544,159 - Echvi_2966 0.63 +1.3 3,544,173 - Echvi_2966 0.65 +0.1 3,544,203 + Echvi_2966 0.68 -2.4 3,544,207 + Echvi_2966 0.68 -0.3 3,544,228 + Echvi_2966 0.70 +1.5 3,544,228 + Echvi_2966 0.70 -1.0 3,544,229 - Echvi_2966 0.70 -3.3 3,544,229 - Echvi_2966 0.70 +0.5 3,544,229 - Echvi_2966 0.70 +1.1 3,544,265 - Echvi_2966 0.74 -1.5 3,544,278 + Echvi_2966 0.75 -0.4 3,544,317 - Echvi_2966 0.79 -1.5 3,544,339 + Echvi_2966 0.81 -0.7 3,544,357 + Echvi_2966 0.82 -1.0 3,544,358 - Echvi_2966 0.83 -0.8 3,544,458 + -0.2 3,544,458 + +1.8 3,544,513 - -0.0 3,544,533 - +1.8 3,544,540 - +0.7 3,544,540 - +0.5 3,544,544 - -0.0 3,544,605 + +1.5 3,544,725 - Echvi_2967 0.12 -0.5 3,544,728 - Echvi_2967 0.12 +0.8 3,544,784 - Echvi_2967 0.17 -1.4 3,544,799 + Echvi_2967 0.19 -0.5 3,544,799 + Echvi_2967 0.19 +2.2 3,544,799 + Echvi_2967 0.19 +1.5 3,544,799 + +1.8 3,544,801 + Echvi_2967 0.19 -1.9 3,544,802 - Echvi_2967 0.19 -1.5 3,544,886 + Echvi_2967 0.27 -0.2 3,544,886 + Echvi_2967 0.27 +0.2 3,544,887 - Echvi_2967 0.27 +1.0 3,544,906 + Echvi_2967 0.29 +0.5 3,544,910 + Echvi_2967 0.29 +1.0 3,544,911 - Echvi_2967 0.29 -1.3 3,544,911 - Echvi_2967 0.29 -0.7 3,544,919 - Echvi_2967 0.30 +0.3 3,544,944 + Echvi_2967 0.32 -0.0 3,544,956 - Echvi_2967 0.34 -1.7 3,545,020 + Echvi_2967 0.40 -0.5 3,545,121 - Echvi_2967 0.49 +0.3 3,545,139 + Echvi_2967 0.51 -2.1 3,545,140 - Echvi_2967 0.51 -0.0 3,545,159 + Echvi_2967 0.53 +0.5 3,545,213 + Echvi_2967 0.58 +1.3 3,545,224 + Echvi_2967 0.59 +1.0 3,545,224 + Echvi_2967 0.59 +1.8 3,545,225 - Echvi_2967 0.59 +1.6 3,545,225 - Echvi_2967 0.59 +1.0 3,545,307 - Echvi_2967 0.67 -0.9 3,545,426 + Echvi_2967 0.79 -0.0 3,545,426 + Echvi_2967 0.79 +0.5 3,545,426 + Echvi_2967 0.79 -0.2 3,545,427 - Echvi_2967 0.79 +1.5 3,545,427 - Echvi_2967 0.79 -0.4 3,545,428 + Echvi_2967 0.79 +0.7 3,545,429 - Echvi_2967 0.79 -0.6 3,545,458 + Echvi_2967 0.82 -1.1 3,545,459 - Echvi_2967 0.82 +0.6 3,545,459 - Echvi_2967 0.82 +1.3 3,545,464 - Echvi_2967 0.82 -0.8 3,545,473 + Echvi_2967 0.83 -0.1 3,545,510 + Echvi_2967 0.87 -0.0 3,545,513 - Echvi_2967 0.87 -1.6 3,545,513 - Echvi_2967 0.87 -0.6
Or see this region's nucleotide sequence