Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2275 and Echvi_2276 are separated by 83 nucleotides Echvi_2276 and Echvi_2277 are separated by 21 nucleotides
Echvi_2275: Echvi_2275 - translesion DNA polymerase (imuC-like) (from data) , at 2,693,898 to 2,696,906
_2275
Echvi_2276: Echvi_2276 - Cysteine-rich domain., at 2,696,990 to 2,697,505
_2276
Echvi_2277: Echvi_2277 - Choline-glycine betaine transporter, at 2,697,527 to 2,699,065
_2277
Position (kb)
2696
2697
2698 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2695.997 kb on - strand, within Echvi_2275 at 2695.997 kb on - strand, within Echvi_2275 at 2696.000 kb on - strand, within Echvi_2275 at 2696.051 kb on - strand, within Echvi_2275 at 2696.131 kb on + strand, within Echvi_2275 at 2696.152 kb on + strand, within Echvi_2275 at 2696.167 kb on - strand, within Echvi_2275 at 2696.227 kb on + strand, within Echvi_2275 at 2696.228 kb on - strand, within Echvi_2275 at 2696.256 kb on + strand, within Echvi_2275 at 2696.285 kb on - strand, within Echvi_2275 at 2696.366 kb on + strand, within Echvi_2275 at 2696.388 kb on + strand, within Echvi_2275 at 2696.388 kb on + strand, within Echvi_2275 at 2696.388 kb on + strand at 2696.388 kb on + strand, within Echvi_2275 at 2696.389 kb on - strand, within Echvi_2275 at 2696.449 kb on - strand, within Echvi_2275 at 2696.541 kb on + strand, within Echvi_2275 at 2696.570 kb on - strand, within Echvi_2275 at 2696.630 kb on + strand at 2696.692 kb on + strand at 2696.693 kb on - strand at 2696.705 kb on + strand at 2696.764 kb on - strand at 2696.786 kb on + strand at 2696.787 kb on - strand at 2696.880 kb on - strand at 2696.880 kb on - strand at 2696.911 kb on - strand at 2696.911 kb on - strand at 2696.911 kb on - strand at 2696.933 kb on - strand at 2697.043 kb on + strand, within Echvi_2276 at 2697.043 kb on + strand, within Echvi_2276 at 2697.043 kb on + strand, within Echvi_2276 at 2697.044 kb on - strand, within Echvi_2276 at 2697.047 kb on + strand, within Echvi_2276 at 2697.048 kb on - strand, within Echvi_2276 at 2697.048 kb on - strand, within Echvi_2276 at 2697.106 kb on - strand, within Echvi_2276 at 2697.133 kb on + strand, within Echvi_2276 at 2697.259 kb on + strand, within Echvi_2276 at 2697.260 kb on - strand, within Echvi_2276 at 2697.290 kb on + strand, within Echvi_2276 at 2697.291 kb on - strand, within Echvi_2276 at 2697.305 kb on + strand, within Echvi_2276 at 2697.306 kb on - strand, within Echvi_2276 at 2697.314 kb on + strand, within Echvi_2276 at 2697.359 kb on - strand, within Echvi_2276 at 2697.392 kb on + strand, within Echvi_2276 at 2697.418 kb on + strand, within Echvi_2276 at 2697.461 kb on + strand at 2697.461 kb on + strand at 2697.462 kb on - strand at 2697.465 kb on + strand at 2697.468 kb on - strand at 2697.468 kb on - strand at 2697.488 kb on + strand at 2697.496 kb on + strand at 2697.496 kb on + strand at 2697.506 kb on + strand at 2697.541 kb on - strand at 2697.541 kb on - strand at 2697.569 kb on + strand at 2697.686 kb on + strand, within Echvi_2277 at 2697.687 kb on - strand, within Echvi_2277 at 2697.687 kb on - strand, within Echvi_2277 at 2697.751 kb on + strand, within Echvi_2277 at 2697.754 kb on + strand, within Echvi_2277 at 2697.755 kb on - strand, within Echvi_2277 at 2697.799 kb on - strand, within Echvi_2277 at 2697.871 kb on - strand, within Echvi_2277 at 2697.937 kb on - strand, within Echvi_2277 at 2697.937 kb on - strand, within Echvi_2277 at 2697.961 kb on + strand, within Echvi_2277 at 2697.962 kb on - strand, within Echvi_2277 at 2698.003 kb on + strand, within Echvi_2277 at 2698.148 kb on + strand, within Echvi_2277 at 2698.148 kb on + strand, within Echvi_2277 at 2698.149 kb on - strand, within Echvi_2277 at 2698.149 kb on - strand, within Echvi_2277 at 2698.149 kb on - strand, within Echvi_2277 at 2698.172 kb on - strand, within Echvi_2277 at 2698.177 kb on - strand, within Echvi_2277 at 2698.177 kb on - strand, within Echvi_2277 at 2698.194 kb on + strand, within Echvi_2277 at 2698.302 kb on - strand, within Echvi_2277 at 2698.377 kb on - strand, within Echvi_2277 at 2698.409 kb on + strand, within Echvi_2277 at 2698.410 kb on - strand, within Echvi_2277 at 2698.410 kb on - strand, within Echvi_2277 at 2698.410 kb on - strand, within Echvi_2277 at 2698.415 kb on + strand, within Echvi_2277 at 2698.416 kb on - strand, within Echvi_2277 at 2698.479 kb on - strand, within Echvi_2277
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,695,997 - Echvi_2275 0.70 -0.6 2,695,997 - Echvi_2275 0.70 -2.0 2,696,000 - Echvi_2275 0.70 -1.9 2,696,051 - Echvi_2275 0.72 -1.0 2,696,131 + Echvi_2275 0.74 +0.1 2,696,152 + Echvi_2275 0.75 -2.6 2,696,167 - Echvi_2275 0.75 +0.2 2,696,227 + Echvi_2275 0.77 -0.2 2,696,228 - Echvi_2275 0.77 -0.3 2,696,256 + Echvi_2275 0.78 +0.6 2,696,285 - Echvi_2275 0.79 -1.1 2,696,366 + Echvi_2275 0.82 +2.8 2,696,388 + Echvi_2275 0.83 +0.0 2,696,388 + Echvi_2275 0.83 -0.1 2,696,388 + +0.8 2,696,388 + Echvi_2275 0.83 +0.4 2,696,389 - Echvi_2275 0.83 +0.3 2,696,449 - Echvi_2275 0.85 -1.4 2,696,541 + Echvi_2275 0.88 +2.0 2,696,570 - Echvi_2275 0.89 -0.2 2,696,630 + +2.8 2,696,692 + -0.3 2,696,693 - +0.7 2,696,705 + +1.6 2,696,764 - +0.4 2,696,786 + +1.0 2,696,787 - -0.2 2,696,880 - +0.0 2,696,880 - +1.2 2,696,911 - -1.2 2,696,911 - +1.1 2,696,911 - -0.8 2,696,933 - +1.5 2,697,043 + Echvi_2276 0.10 -0.8 2,697,043 + Echvi_2276 0.10 +0.5 2,697,043 + Echvi_2276 0.10 -0.0 2,697,044 - Echvi_2276 0.10 -1.5 2,697,047 + Echvi_2276 0.11 +0.5 2,697,048 - Echvi_2276 0.11 -0.9 2,697,048 - Echvi_2276 0.11 -1.5 2,697,106 - Echvi_2276 0.22 +3.1 2,697,133 + Echvi_2276 0.28 +0.7 2,697,259 + Echvi_2276 0.52 +2.3 2,697,260 - Echvi_2276 0.52 +2.3 2,697,290 + Echvi_2276 0.58 +2.0 2,697,291 - Echvi_2276 0.58 +3.2 2,697,305 + Echvi_2276 0.61 +2.2 2,697,306 - Echvi_2276 0.61 +1.6 2,697,314 + Echvi_2276 0.63 +1.9 2,697,359 - Echvi_2276 0.72 +1.3 2,697,392 + Echvi_2276 0.78 +1.9 2,697,418 + Echvi_2276 0.83 +2.1 2,697,461 + +2.0 2,697,461 + +0.0 2,697,462 - +1.2 2,697,465 + +2.6 2,697,468 - +1.7 2,697,468 - +2.8 2,697,488 + +1.9 2,697,496 + +1.9 2,697,496 + +0.2 2,697,506 + -1.3 2,697,541 - -1.0 2,697,541 - +1.3 2,697,569 + +1.5 2,697,686 + Echvi_2277 0.10 +0.3 2,697,687 - Echvi_2277 0.10 -0.2 2,697,687 - Echvi_2277 0.10 -0.4 2,697,751 + Echvi_2277 0.15 +0.4 2,697,754 + Echvi_2277 0.15 -1.5 2,697,755 - Echvi_2277 0.15 -0.3 2,697,799 - Echvi_2277 0.18 +0.7 2,697,871 - Echvi_2277 0.22 -1.2 2,697,937 - Echvi_2277 0.27 +0.1 2,697,937 - Echvi_2277 0.27 -1.3 2,697,961 + Echvi_2277 0.28 +0.9 2,697,962 - Echvi_2277 0.28 -0.2 2,698,003 + Echvi_2277 0.31 +0.4 2,698,148 + Echvi_2277 0.40 -0.2 2,698,148 + Echvi_2277 0.40 +0.8 2,698,149 - Echvi_2277 0.40 +1.5 2,698,149 - Echvi_2277 0.40 +0.1 2,698,149 - Echvi_2277 0.40 -0.6 2,698,172 - Echvi_2277 0.42 -0.2 2,698,177 - Echvi_2277 0.42 +0.7 2,698,177 - Echvi_2277 0.42 -1.6 2,698,194 + Echvi_2277 0.43 -1.2 2,698,302 - Echvi_2277 0.50 -0.1 2,698,377 - Echvi_2277 0.55 +0.2 2,698,409 + Echvi_2277 0.57 +0.0 2,698,410 - Echvi_2277 0.57 +0.2 2,698,410 - Echvi_2277 0.57 -0.8 2,698,410 - Echvi_2277 0.57 -0.9 2,698,415 + Echvi_2277 0.58 -0.9 2,698,416 - Echvi_2277 0.58 -1.6 2,698,479 - Echvi_2277 0.62 +1.8
Or see this region's nucleotide sequence