Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2048 and Echvi_2049 are separated by 133 nucleotides Echvi_2049 and Echvi_2050 overlap by 4 nucleotides
Echvi_2048: Echvi_2048 - Glycosyltransferases, probably involved in cell wall biogenesis, at 2,416,973 to 2,418,103
_2048
Echvi_2049: Echvi_2049 - tRNA-guanine transglycosylase, queuosine-34-forming, at 2,418,237 to 2,419,367
_2049
Echvi_2050: Echvi_2050 - Predicted permeases, at 2,419,364 to 2,420,440
_2050
Position (kb)
2418
2419
2420 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2417.251 kb on + strand, within Echvi_2048 at 2417.263 kb on + strand, within Echvi_2048 at 2417.304 kb on + strand, within Echvi_2048 at 2417.304 kb on + strand, within Echvi_2048 at 2417.304 kb on + strand, within Echvi_2048 at 2417.304 kb on + strand, within Echvi_2048 at 2417.304 kb on + strand, within Echvi_2048 at 2417.305 kb on - strand, within Echvi_2048 at 2417.307 kb on + strand, within Echvi_2048 at 2417.357 kb on + strand, within Echvi_2048 at 2417.357 kb on + strand, within Echvi_2048 at 2417.400 kb on + strand, within Echvi_2048 at 2417.400 kb on + strand, within Echvi_2048 at 2417.400 kb on + strand, within Echvi_2048 at 2417.402 kb on + strand, within Echvi_2048 at 2417.402 kb on + strand, within Echvi_2048 at 2417.402 kb on + strand, within Echvi_2048 at 2417.402 kb on + strand, within Echvi_2048 at 2417.402 kb on + strand, within Echvi_2048 at 2417.403 kb on - strand, within Echvi_2048 at 2417.425 kb on + strand, within Echvi_2048 at 2417.480 kb on + strand, within Echvi_2048 at 2417.539 kb on + strand, within Echvi_2048 at 2417.577 kb on - strand, within Echvi_2048 at 2417.715 kb on + strand, within Echvi_2048 at 2417.715 kb on + strand, within Echvi_2048 at 2417.716 kb on - strand, within Echvi_2048 at 2417.716 kb on - strand, within Echvi_2048 at 2417.716 kb on - strand, within Echvi_2048 at 2417.728 kb on + strand, within Echvi_2048 at 2417.728 kb on + strand, within Echvi_2048 at 2417.740 kb on + strand, within Echvi_2048 at 2417.740 kb on + strand, within Echvi_2048 at 2417.748 kb on + strand, within Echvi_2048 at 2417.749 kb on - strand, within Echvi_2048 at 2417.749 kb on - strand, within Echvi_2048 at 2417.779 kb on - strand, within Echvi_2048 at 2417.779 kb on - strand, within Echvi_2048 at 2417.779 kb on - strand, within Echvi_2048 at 2417.850 kb on + strand, within Echvi_2048 at 2417.873 kb on + strand, within Echvi_2048 at 2417.874 kb on - strand, within Echvi_2048 at 2417.874 kb on - strand, within Echvi_2048 at 2417.942 kb on - strand, within Echvi_2048 at 2417.942 kb on - strand, within Echvi_2048 at 2418.020 kb on + strand at 2418.021 kb on - strand at 2418.021 kb on - strand at 2418.021 kb on - strand at 2418.021 kb on - strand at 2418.021 kb on - strand at 2418.021 kb on - strand at 2418.021 kb on - strand at 2418.021 kb on - strand at 2418.049 kb on + strand at 2418.056 kb on + strand at 2418.057 kb on - strand at 2418.065 kb on - strand at 2418.065 kb on - strand at 2418.122 kb on + strand at 2418.130 kb on + strand at 2418.160 kb on + strand at 2418.192 kb on + strand at 2418.250 kb on + strand at 2418.329 kb on + strand at 2418.379 kb on + strand, within Echvi_2049 at 2418.384 kb on + strand, within Echvi_2049 at 2418.404 kb on + strand, within Echvi_2049 at 2418.420 kb on + strand, within Echvi_2049 at 2418.420 kb on + strand, within Echvi_2049 at 2418.420 kb on + strand, within Echvi_2049 at 2418.429 kb on + strand, within Echvi_2049 at 2418.429 kb on + strand, within Echvi_2049 at 2418.494 kb on + strand, within Echvi_2049 at 2418.599 kb on + strand, within Echvi_2049 at 2418.632 kb on + strand, within Echvi_2049 at 2418.634 kb on + strand, within Echvi_2049 at 2418.634 kb on + strand, within Echvi_2049 at 2418.680 kb on + strand, within Echvi_2049 at 2418.754 kb on + strand, within Echvi_2049 at 2418.783 kb on + strand, within Echvi_2049 at 2418.783 kb on + strand, within Echvi_2049 at 2418.828 kb on + strand, within Echvi_2049 at 2418.830 kb on + strand, within Echvi_2049 at 2418.830 kb on + strand, within Echvi_2049 at 2418.971 kb on + strand, within Echvi_2049 at 2418.998 kb on + strand, within Echvi_2049 at 2419.197 kb on + strand, within Echvi_2049 at 2419.211 kb on + strand, within Echvi_2049 at 2419.269 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,417,251 + Echvi_2048 0.25 -0.0 2,417,263 + Echvi_2048 0.26 +1.2 2,417,304 + Echvi_2048 0.29 +0.8 2,417,304 + Echvi_2048 0.29 +1.4 2,417,304 + Echvi_2048 0.29 -0.1 2,417,304 + Echvi_2048 0.29 +3.8 2,417,304 + Echvi_2048 0.29 -1.7 2,417,305 - Echvi_2048 0.29 -0.5 2,417,307 + Echvi_2048 0.30 +0.1 2,417,357 + Echvi_2048 0.34 +1.1 2,417,357 + Echvi_2048 0.34 +1.2 2,417,400 + Echvi_2048 0.38 +2.1 2,417,400 + Echvi_2048 0.38 +0.6 2,417,400 + Echvi_2048 0.38 -1.7 2,417,402 + Echvi_2048 0.38 -2.4 2,417,402 + Echvi_2048 0.38 -0.4 2,417,402 + Echvi_2048 0.38 -0.5 2,417,402 + Echvi_2048 0.38 +0.3 2,417,402 + Echvi_2048 0.38 +0.4 2,417,403 - Echvi_2048 0.38 +0.2 2,417,425 + Echvi_2048 0.40 +0.1 2,417,480 + Echvi_2048 0.45 -0.0 2,417,539 + Echvi_2048 0.50 -0.4 2,417,577 - Echvi_2048 0.53 -0.0 2,417,715 + Echvi_2048 0.66 +0.4 2,417,715 + Echvi_2048 0.66 -0.3 2,417,716 - Echvi_2048 0.66 -0.1 2,417,716 - Echvi_2048 0.66 -0.1 2,417,716 - Echvi_2048 0.66 -1.1 2,417,728 + Echvi_2048 0.67 -0.6 2,417,728 + Echvi_2048 0.67 +0.1 2,417,740 + Echvi_2048 0.68 -1.5 2,417,740 + Echvi_2048 0.68 +0.9 2,417,748 + Echvi_2048 0.69 -1.4 2,417,749 - Echvi_2048 0.69 -3.3 2,417,749 - Echvi_2048 0.69 -0.5 2,417,779 - Echvi_2048 0.71 +0.2 2,417,779 - Echvi_2048 0.71 +1.2 2,417,779 - Echvi_2048 0.71 -2.2 2,417,850 + Echvi_2048 0.78 -0.3 2,417,873 + Echvi_2048 0.80 +3.8 2,417,874 - Echvi_2048 0.80 -0.7 2,417,874 - Echvi_2048 0.80 +0.8 2,417,942 - Echvi_2048 0.86 -0.3 2,417,942 - Echvi_2048 0.86 +0.3 2,418,020 + +0.5 2,418,021 - -0.5 2,418,021 - +0.3 2,418,021 - -1.0 2,418,021 - -1.2 2,418,021 - +0.0 2,418,021 - +0.3 2,418,021 - +0.4 2,418,021 - +0.7 2,418,049 + -0.4 2,418,056 + +0.8 2,418,057 - -0.4 2,418,065 - +0.6 2,418,065 - -0.5 2,418,122 + +1.1 2,418,130 + -0.3 2,418,160 + +3.1 2,418,192 + +0.2 2,418,250 + -0.9 2,418,329 + +0.4 2,418,379 + Echvi_2049 0.13 -0.8 2,418,384 + Echvi_2049 0.13 -1.9 2,418,404 + Echvi_2049 0.15 -2.1 2,418,420 + Echvi_2049 0.16 -1.0 2,418,420 + Echvi_2049 0.16 -3.4 2,418,420 + Echvi_2049 0.16 -1.0 2,418,429 + Echvi_2049 0.17 -0.9 2,418,429 + Echvi_2049 0.17 -0.7 2,418,494 + Echvi_2049 0.23 -3.2 2,418,599 + Echvi_2049 0.32 -2.5 2,418,632 + Echvi_2049 0.35 +0.1 2,418,634 + Echvi_2049 0.35 -0.6 2,418,634 + Echvi_2049 0.35 -0.4 2,418,680 + Echvi_2049 0.39 -0.6 2,418,754 + Echvi_2049 0.46 +0.7 2,418,783 + Echvi_2049 0.48 +1.2 2,418,783 + Echvi_2049 0.48 +0.1 2,418,828 + Echvi_2049 0.52 +0.3 2,418,830 + Echvi_2049 0.52 +1.2 2,418,830 + Echvi_2049 0.52 -1.4 2,418,971 + Echvi_2049 0.65 +1.8 2,418,998 + Echvi_2049 0.67 +0.6 2,419,197 + Echvi_2049 0.85 -0.9 2,419,211 + Echvi_2049 0.86 +1.1 2,419,269 + -2.1
Or see this region's nucleotide sequence