Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1845 and Echvi_1846 are separated by 42 nucleotides Echvi_1846 and Echvi_1847 are separated by 34 nucleotides
Echvi_1845: Echvi_1845 - 2-hydroxy-3-keto-glucal transporter (from data) , at 2,160,667 to 2,161,899
_1845
Echvi_1846: Echvi_1846 - 3-keto-beta-glycoside 1,2-lyase (from data) , at 2,161,942 to 2,162,775
_1846
Echvi_1847: Echvi_1847 - periplasmic glucoside 3-dehydrogenase (lacA subunit) (EC 1.1.99.13) (from data) , at 2,162,810 to 2,164,489
_1847
Position (kb)
2161
2162
2163 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2160.964 kb on + strand, within Echvi_1845 at 2160.964 kb on + strand, within Echvi_1845 at 2160.965 kb on - strand, within Echvi_1845 at 2160.965 kb on - strand, within Echvi_1845 at 2160.976 kb on + strand, within Echvi_1845 at 2160.977 kb on - strand, within Echvi_1845 at 2160.988 kb on + strand, within Echvi_1845 at 2160.990 kb on + strand, within Echvi_1845 at 2160.990 kb on + strand, within Echvi_1845 at 2160.991 kb on - strand, within Echvi_1845 at 2161.065 kb on + strand, within Echvi_1845 at 2161.165 kb on + strand, within Echvi_1845 at 2161.165 kb on + strand, within Echvi_1845 at 2161.166 kb on - strand, within Echvi_1845 at 2161.166 kb on - strand, within Echvi_1845 at 2161.166 kb on - strand, within Echvi_1845 at 2161.200 kb on - strand, within Echvi_1845 at 2161.210 kb on + strand, within Echvi_1845 at 2161.218 kb on + strand, within Echvi_1845 at 2161.218 kb on + strand, within Echvi_1845 at 2161.218 kb on + strand, within Echvi_1845 at 2161.218 kb on + strand, within Echvi_1845 at 2161.219 kb on - strand, within Echvi_1845 at 2161.219 kb on - strand, within Echvi_1845 at 2161.219 kb on - strand, within Echvi_1845 at 2161.369 kb on + strand, within Echvi_1845 at 2161.370 kb on - strand, within Echvi_1845 at 2161.370 kb on - strand, within Echvi_1845 at 2161.373 kb on - strand, within Echvi_1845 at 2161.420 kb on - strand, within Echvi_1845 at 2161.420 kb on - strand, within Echvi_1845 at 2161.544 kb on - strand, within Echvi_1845 at 2161.651 kb on + strand, within Echvi_1845 at 2161.654 kb on - strand, within Echvi_1845 at 2161.717 kb on + strand, within Echvi_1845 at 2161.771 kb on + strand, within Echvi_1845 at 2161.774 kb on - strand, within Echvi_1845 at 2161.786 kb on - strand at 2161.901 kb on - strand at 2161.924 kb on - strand at 2161.924 kb on - strand at 2161.965 kb on + strand at 2162.022 kb on + strand at 2162.023 kb on - strand at 2162.050 kb on + strand, within Echvi_1846 at 2162.050 kb on + strand, within Echvi_1846 at 2162.051 kb on - strand, within Echvi_1846 at 2162.051 kb on - strand, within Echvi_1846 at 2162.051 kb on - strand, within Echvi_1846 at 2162.075 kb on + strand, within Echvi_1846 at 2162.075 kb on + strand, within Echvi_1846 at 2162.075 kb on + strand, within Echvi_1846 at 2162.076 kb on - strand, within Echvi_1846 at 2162.076 kb on - strand, within Echvi_1846 at 2162.092 kb on + strand, within Echvi_1846 at 2162.095 kb on - strand, within Echvi_1846 at 2162.104 kb on - strand, within Echvi_1846 at 2162.152 kb on + strand, within Echvi_1846 at 2162.152 kb on + strand, within Echvi_1846 at 2162.161 kb on + strand, within Echvi_1846 at 2162.162 kb on - strand, within Echvi_1846 at 2162.162 kb on - strand, within Echvi_1846 at 2162.209 kb on - strand, within Echvi_1846 at 2162.319 kb on + strand, within Echvi_1846 at 2162.352 kb on - strand, within Echvi_1846 at 2162.352 kb on - strand, within Echvi_1846 at 2162.352 kb on - strand, within Echvi_1846 at 2162.430 kb on - strand, within Echvi_1846 at 2162.430 kb on - strand, within Echvi_1846 at 2162.445 kb on + strand, within Echvi_1846 at 2162.445 kb on + strand, within Echvi_1846 at 2162.445 kb on + strand, within Echvi_1846 at 2162.446 kb on - strand, within Echvi_1846 at 2162.446 kb on - strand, within Echvi_1846 at 2162.515 kb on + strand, within Echvi_1846 at 2162.524 kb on + strand, within Echvi_1846 at 2162.524 kb on + strand, within Echvi_1846 at 2162.524 kb on + strand, within Echvi_1846 at 2162.524 kb on + strand, within Echvi_1846 at 2162.525 kb on - strand, within Echvi_1846 at 2162.525 kb on - strand, within Echvi_1846 at 2162.529 kb on + strand, within Echvi_1846 at 2162.530 kb on - strand, within Echvi_1846 at 2162.581 kb on + strand, within Echvi_1846 at 2162.581 kb on + strand, within Echvi_1846 at 2162.582 kb on - strand, within Echvi_1846 at 2162.582 kb on - strand, within Echvi_1846 at 2162.582 kb on - strand, within Echvi_1846 at 2162.582 kb on - strand, within Echvi_1846 at 2162.584 kb on + strand, within Echvi_1846 at 2162.584 kb on + strand, within Echvi_1846 at 2162.593 kb on + strand, within Echvi_1846 at 2162.594 kb on - strand, within Echvi_1846 at 2162.598 kb on + strand, within Echvi_1846 at 2162.599 kb on - strand, within Echvi_1846 at 2162.599 kb on - strand, within Echvi_1846 at 2162.645 kb on + strand, within Echvi_1846 at 2162.646 kb on - strand, within Echvi_1846 at 2162.646 kb on - strand, within Echvi_1846 at 2162.646 kb on - strand, within Echvi_1846 at 2162.689 kb on - strand, within Echvi_1846 at 2162.695 kb on + strand at 2162.696 kb on - strand at 2162.697 kb on + strand at 2162.697 kb on + strand at 2162.697 kb on + strand at 2162.698 kb on - strand at 2162.763 kb on - strand at 2162.788 kb on + strand at 2162.789 kb on - strand at 2162.792 kb on - strand at 2162.798 kb on + strand at 2162.800 kb on + strand at 2162.810 kb on - strand at 2162.825 kb on + strand at 2162.825 kb on + strand at 2162.851 kb on + strand at 2162.851 kb on + strand at 2162.851 kb on + strand at 2162.852 kb on - strand at 2162.852 kb on - strand at 2162.853 kb on + strand at 2162.872 kb on + strand at 2162.907 kb on + strand at 2162.929 kb on - strand at 2162.948 kb on - strand at 2163.038 kb on + strand, within Echvi_1847 at 2163.038 kb on + strand, within Echvi_1847 at 2163.039 kb on - strand, within Echvi_1847 at 2163.083 kb on - strand, within Echvi_1847 at 2163.083 kb on - strand, within Echvi_1847 at 2163.092 kb on + strand, within Echvi_1847 at 2163.093 kb on - strand, within Echvi_1847 at 2163.093 kb on - strand, within Echvi_1847 at 2163.093 kb on - strand, within Echvi_1847 at 2163.096 kb on + strand, within Echvi_1847 at 2163.096 kb on + strand, within Echvi_1847 at 2163.097 kb on - strand, within Echvi_1847 at 2163.113 kb on - strand, within Echvi_1847 at 2163.204 kb on + strand, within Echvi_1847 at 2163.241 kb on + strand, within Echvi_1847 at 2163.242 kb on - strand, within Echvi_1847 at 2163.242 kb on - strand, within Echvi_1847 at 2163.267 kb on - strand, within Echvi_1847 at 2163.335 kb on - strand, within Echvi_1847 at 2163.372 kb on + strand, within Echvi_1847 at 2163.373 kb on - strand, within Echvi_1847 at 2163.373 kb on - strand, within Echvi_1847 at 2163.482 kb on - strand, within Echvi_1847 at 2163.482 kb on - strand, within Echvi_1847 at 2163.482 kb on - strand, within Echvi_1847 at 2163.513 kb on - strand, within Echvi_1847 at 2163.513 kb on - strand, within Echvi_1847 at 2163.533 kb on - strand, within Echvi_1847 at 2163.564 kb on + strand, within Echvi_1847 at 2163.588 kb on + strand, within Echvi_1847 at 2163.588 kb on + strand, within Echvi_1847 at 2163.589 kb on - strand, within Echvi_1847 at 2163.589 kb on - strand, within Echvi_1847 at 2163.598 kb on - strand, within Echvi_1847 at 2163.603 kb on - strand, within Echvi_1847 at 2163.603 kb on - strand, within Echvi_1847 at 2163.671 kb on + strand, within Echvi_1847 at 2163.673 kb on + strand, within Echvi_1847 at 2163.673 kb on + strand, within Echvi_1847 at 2163.688 kb on - strand, within Echvi_1847 at 2163.709 kb on + strand, within Echvi_1847 at 2163.723 kb on + strand, within Echvi_1847 at 2163.724 kb on - strand, within Echvi_1847 at 2163.724 kb on - strand, within Echvi_1847 at 2163.745 kb on + strand, within Echvi_1847 at 2163.746 kb on - strand, within Echvi_1847 at 2163.769 kb on + strand, within Echvi_1847 at 2163.769 kb on + strand, within Echvi_1847 at 2163.769 kb on + strand, within Echvi_1847
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,160,964 + Echvi_1845 0.24 -0.1 2,160,964 + Echvi_1845 0.24 -0.0 2,160,965 - Echvi_1845 0.24 -0.3 2,160,965 - Echvi_1845 0.24 +0.5 2,160,976 + Echvi_1845 0.25 -1.4 2,160,977 - Echvi_1845 0.25 -0.4 2,160,988 + Echvi_1845 0.26 -1.1 2,160,990 + Echvi_1845 0.26 +1.2 2,160,990 + Echvi_1845 0.26 -1.7 2,160,991 - Echvi_1845 0.26 -0.3 2,161,065 + Echvi_1845 0.32 +0.2 2,161,165 + Echvi_1845 0.40 -0.0 2,161,165 + Echvi_1845 0.40 +0.0 2,161,166 - Echvi_1845 0.40 -2.8 2,161,166 - Echvi_1845 0.40 -0.6 2,161,166 - Echvi_1845 0.40 +0.8 2,161,200 - Echvi_1845 0.43 -2.3 2,161,210 + Echvi_1845 0.44 -0.6 2,161,218 + Echvi_1845 0.45 -0.6 2,161,218 + Echvi_1845 0.45 -2.8 2,161,218 + Echvi_1845 0.45 +1.7 2,161,218 + Echvi_1845 0.45 -2.1 2,161,219 - Echvi_1845 0.45 +2.6 2,161,219 - Echvi_1845 0.45 -1.0 2,161,219 - Echvi_1845 0.45 +0.0 2,161,369 + Echvi_1845 0.57 +0.2 2,161,370 - Echvi_1845 0.57 +0.4 2,161,370 - Echvi_1845 0.57 -1.9 2,161,373 - Echvi_1845 0.57 +0.8 2,161,420 - Echvi_1845 0.61 -0.2 2,161,420 - Echvi_1845 0.61 -0.3 2,161,544 - Echvi_1845 0.71 -0.9 2,161,651 + Echvi_1845 0.80 -0.3 2,161,654 - Echvi_1845 0.80 +3.4 2,161,717 + Echvi_1845 0.85 -0.1 2,161,771 + Echvi_1845 0.90 +1.2 2,161,774 - Echvi_1845 0.90 +0.8 2,161,786 - -0.8 2,161,901 - +0.2 2,161,924 - +3.1 2,161,924 - +0.8 2,161,965 + +1.6 2,162,022 + -0.5 2,162,023 - +0.5 2,162,050 + Echvi_1846 0.13 +1.2 2,162,050 + Echvi_1846 0.13 +1.0 2,162,051 - Echvi_1846 0.13 -0.9 2,162,051 - Echvi_1846 0.13 +0.0 2,162,051 - Echvi_1846 0.13 +2.5 2,162,075 + Echvi_1846 0.16 +1.9 2,162,075 + Echvi_1846 0.16 +1.6 2,162,075 + Echvi_1846 0.16 +0.6 2,162,076 - Echvi_1846 0.16 -0.4 2,162,076 - Echvi_1846 0.16 -0.4 2,162,092 + Echvi_1846 0.18 -1.6 2,162,095 - Echvi_1846 0.18 -0.2 2,162,104 - Echvi_1846 0.19 +0.2 2,162,152 + Echvi_1846 0.25 -0.2 2,162,152 + Echvi_1846 0.25 +0.2 2,162,161 + Echvi_1846 0.26 -1.3 2,162,162 - Echvi_1846 0.26 -0.3 2,162,162 - Echvi_1846 0.26 +0.3 2,162,209 - Echvi_1846 0.32 -1.1 2,162,319 + Echvi_1846 0.45 -1.4 2,162,352 - Echvi_1846 0.49 +0.1 2,162,352 - Echvi_1846 0.49 -0.5 2,162,352 - Echvi_1846 0.49 -0.8 2,162,430 - Echvi_1846 0.59 +0.1 2,162,430 - Echvi_1846 0.59 +1.6 2,162,445 + Echvi_1846 0.60 +0.7 2,162,445 + Echvi_1846 0.60 +0.9 2,162,445 + Echvi_1846 0.60 +1.3 2,162,446 - Echvi_1846 0.60 +1.8 2,162,446 - Echvi_1846 0.60 -1.7 2,162,515 + Echvi_1846 0.69 +2.3 2,162,524 + Echvi_1846 0.70 +0.7 2,162,524 + Echvi_1846 0.70 -1.8 2,162,524 + Echvi_1846 0.70 +1.1 2,162,524 + Echvi_1846 0.70 +0.3 2,162,525 - Echvi_1846 0.70 +0.1 2,162,525 - Echvi_1846 0.70 -0.6 2,162,529 + Echvi_1846 0.70 -1.2 2,162,530 - Echvi_1846 0.71 +2.1 2,162,581 + Echvi_1846 0.77 +1.9 2,162,581 + Echvi_1846 0.77 +0.6 2,162,582 - Echvi_1846 0.77 +1.0 2,162,582 - Echvi_1846 0.77 -0.4 2,162,582 - Echvi_1846 0.77 -0.9 2,162,582 - Echvi_1846 0.77 -0.4 2,162,584 + Echvi_1846 0.77 +0.3 2,162,584 + Echvi_1846 0.77 -0.2 2,162,593 + Echvi_1846 0.78 +0.0 2,162,594 - Echvi_1846 0.78 +0.2 2,162,598 + Echvi_1846 0.79 -0.2 2,162,599 - Echvi_1846 0.79 -0.8 2,162,599 - Echvi_1846 0.79 +2.1 2,162,645 + Echvi_1846 0.84 +0.5 2,162,646 - Echvi_1846 0.84 +3.1 2,162,646 - Echvi_1846 0.84 +0.2 2,162,646 - Echvi_1846 0.84 +0.7 2,162,689 - Echvi_1846 0.90 -0.7 2,162,695 + -0.3 2,162,696 - +1.8 2,162,697 + -0.5 2,162,697 + +0.2 2,162,697 + -0.9 2,162,698 - -0.8 2,162,763 - -1.5 2,162,788 + +1.5 2,162,789 - +0.2 2,162,792 - -0.2 2,162,798 + +0.8 2,162,800 + +0.8 2,162,810 - -0.6 2,162,825 + -0.6 2,162,825 + -1.7 2,162,851 + +2.1 2,162,851 + -3.6 2,162,851 + -0.2 2,162,852 - +0.8 2,162,852 - -1.5 2,162,853 + -0.4 2,162,872 + +0.3 2,162,907 + +0.8 2,162,929 - +0.8 2,162,948 - -0.6 2,163,038 + Echvi_1847 0.14 +1.3 2,163,038 + Echvi_1847 0.14 +1.9 2,163,039 - Echvi_1847 0.14 -0.3 2,163,083 - Echvi_1847 0.16 -0.7 2,163,083 - Echvi_1847 0.16 -0.8 2,163,092 + Echvi_1847 0.17 -1.4 2,163,093 - Echvi_1847 0.17 +1.2 2,163,093 - Echvi_1847 0.17 +0.2 2,163,093 - Echvi_1847 0.17 +0.2 2,163,096 + Echvi_1847 0.17 +1.2 2,163,096 + Echvi_1847 0.17 -0.1 2,163,097 - Echvi_1847 0.17 -0.2 2,163,113 - Echvi_1847 0.18 +1.2 2,163,204 + Echvi_1847 0.23 -0.5 2,163,241 + Echvi_1847 0.26 -1.6 2,163,242 - Echvi_1847 0.26 +0.6 2,163,242 - Echvi_1847 0.26 +0.8 2,163,267 - Echvi_1847 0.27 -1.0 2,163,335 - Echvi_1847 0.31 -1.1 2,163,372 + Echvi_1847 0.33 -2.6 2,163,373 - Echvi_1847 0.34 +1.2 2,163,373 - Echvi_1847 0.34 -1.3 2,163,482 - Echvi_1847 0.40 +0.6 2,163,482 - Echvi_1847 0.40 +1.2 2,163,482 - Echvi_1847 0.40 -2.3 2,163,513 - Echvi_1847 0.42 -1.3 2,163,513 - Echvi_1847 0.42 +0.9 2,163,533 - Echvi_1847 0.43 -0.8 2,163,564 + Echvi_1847 0.45 +0.8 2,163,588 + Echvi_1847 0.46 +0.5 2,163,588 + Echvi_1847 0.46 +0.5 2,163,589 - Echvi_1847 0.46 -0.0 2,163,589 - Echvi_1847 0.46 -1.0 2,163,598 - Echvi_1847 0.47 +0.4 2,163,603 - Echvi_1847 0.47 +1.2 2,163,603 - Echvi_1847 0.47 -2.2 2,163,671 + Echvi_1847 0.51 +1.2 2,163,673 + Echvi_1847 0.51 +0.1 2,163,673 + Echvi_1847 0.51 -1.3 2,163,688 - Echvi_1847 0.52 -1.5 2,163,709 + Echvi_1847 0.54 -0.2 2,163,723 + Echvi_1847 0.54 +0.2 2,163,724 - Echvi_1847 0.54 +0.6 2,163,724 - Echvi_1847 0.54 -1.8 2,163,745 + Echvi_1847 0.56 +1.2 2,163,746 - Echvi_1847 0.56 -1.2 2,163,769 + Echvi_1847 0.57 +0.3 2,163,769 + Echvi_1847 0.57 -0.8 2,163,769 + Echvi_1847 0.57 -0.4
Or see this region's nucleotide sequence